RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 KDM5DQ9BY66 1539 aa35.74■■■■□ 3.31
CLDND1-230ENST00000514537 DMRT2Q9Y5R5 561 aa35.74■■■■□ 3.31
CLDND1-230ENST00000514537 KIF15Q9NS87 1388 aa35.72■■■■□ 3.31
CLDND1-230ENST00000514537 DUOX2Q9NRD8 1548 aa35.72■■■■□ 3.31
CLDND1-230ENST00000514537 RRP7BPQ9NSQ0 103 aa35.71■■■■□ 3.31
CLDND1-230ENST00000514537 DNMT1P26358 1616 aaKnown RBP35.7■■■■□ 3.31
CLDND1-230ENST00000514537 FBXO31Q5XUX0 539 aaPredicted RBP35.69■■■■□ 3.3
CLDND1-230ENST00000514537 STRCQ7RTU9 1775 aa35.68■■■■□ 3.3
CLDND1-230ENST00000514537 RNF17Q9BXT8 1623 aaKnown RBP35.67■■■■□ 3.3
CLDND1-230ENST00000514537 EIF2AK4Q9P2K8 1649 aaKnown RBP35.67■■■■□ 3.3
CLDND1-230ENST00000514537 PZPP20742 1482 aa35.67■■■■□ 3.3
CLDND1-230ENST00000514537 CROCC2H7BZ55 1655 aa35.66■■■■□ 3.3
CLDND1-230ENST00000514537 FAM50AQ14320 339 aaKnown RBP35.65■■■■□ 3.3
CLDND1-230ENST00000514537 CHIC2Q9UKJ5 165 aa35.65■■■■□ 3.3
CLDND1-230ENST00000514537 NCOA1Q15788 1441 aa35.65■■■■□ 3.3
CLDND1-230ENST00000514537 ERBINQ96RT1 1412 aa35.62■■■■□ 3.29
CLDND1-230ENST00000514537 ANKRD30AQ9BXX3 1397 aa35.62■■■■□ 3.29
CLDND1-230ENST00000514537 MYO3AQ8NEV4 1616 aa35.61■■■■□ 3.29
CLDND1-230ENST00000514537 TNRQ92752 1358 aa35.61■■■■□ 3.29
CLDND1-230ENST00000514537 PTPRTO14522 1441 aa35.6■■■■□ 3.29
CLDND1-230ENST00000514537 ABCC3O15438 1527 aa35.59■■■■□ 3.29
CLDND1-230ENST00000514537 CEP170BQ9Y4F5 1589 aaPredicted RBP35.59■■■■□ 3.29
CLDND1-230ENST00000514537 CAMSAP1Q5T5Y3 1602 aa35.58■■■■□ 3.29
CLDND1-230ENST00000514537 MROH1Q8NDA8 1641 aa35.57■■■■□ 3.29
CLDND1-230ENST00000514537 FBXO41Q8TF61 875 aa35.56■■■■□ 3.28
CLDND1-230ENST00000514537 ZNF142P52746 1687 aaPredicted RBP35.56■■■■□ 3.28
CLDND1-230ENST00000514537 A2ML1A8K2U0 1454 aa35.55■■■■□ 3.28
CLDND1-230ENST00000514537 ADGRL2O95490 1459 aa35.52■■■■□ 3.28
CLDND1-230ENST00000514537 PLA2R1Q13018 1463 aa35.52■■■■□ 3.28
CLDND1-230ENST00000514537 NCKAP5LQ9HCH0 1330 aa35.52■■■■□ 3.28
CLDND1-230ENST00000514537 ZC3H13Q5T200 1668 aaKnown RBP35.51■■■■□ 3.28
CLDND1-230ENST00000514537 PKD2Q13563 968 aa35.5■■■■□ 3.27
CLDND1-230ENST00000514537 PPARGC1BQ86YN6 1023 aaKnown RBP35.5■■■■□ 3.27
CLDND1-230ENST00000514537 CERKQ8TCT0 537 aa35.5■■■■□ 3.27
CLDND1-230ENST00000514537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.47■■■■□ 3.27
CLDND1-230ENST00000514537 PRDM15P57071 1507 aaPredicted RBP35.47■■■■□ 3.27
CLDND1-230ENST00000514537 NLRP1Q9C000 1473 aa35.44■■■■□ 3.26
CLDND1-230ENST00000514537 SPATA31D1Q6ZQQ2 1576 aa35.42■■■■□ 3.26
CLDND1-230ENST00000514537 KANK1Q14678 1352 aa35.41■■■■□ 3.26
CLDND1-230ENST00000514537 ERVK-7P63135 1459 aa35.41■■■■□ 3.26
CLDND1-230ENST00000514537 ARHGAP31Q2M1Z3 1444 aa35.4■■■■□ 3.26
CLDND1-230ENST00000514537 DEPDC5O75140 1603 aa35.4■■■■□ 3.26
CLDND1-230ENST00000514537 THEMISQ8N1K5 641 aaPredicted RBP35.39■■■■□ 3.26
CLDND1-230ENST00000514537 CEP152O94986 1710 aa35.39■■■■□ 3.26
CLDND1-230ENST00000514537 ANKRD50Q9ULJ7 1429 aa35.36■■■■□ 3.25
CLDND1-230ENST00000514537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.35■■■■□ 3.25
CLDND1-230ENST00000514537 UGGT1Q9NYU2 1555 aa35.33■■■■□ 3.25
CLDND1-230ENST00000514537 VWDEQ8N2E2 1590 aa35.32■■■■□ 3.24
CLDND1-230ENST00000514537 LMTK2Q8IWU2 1503 aa35.32■■■■□ 3.24
CLDND1-230ENST00000514537 ROCK1Q13464 1354 aa35.31■■■■□ 3.24
CLDND1-230ENST00000514537 ANKLE2Q86XL3 938 aa35.29■■■■□ 3.24
CLDND1-230ENST00000514537 LTBP4Q8N2S1 1624 aa35.28■■■■□ 3.24
CLDND1-230ENST00000514537 ITGAEP38570 1179 aa35.25■■■■□ 3.23
CLDND1-230ENST00000514537 ZNF335Q9H4Z2 1342 aaPredicted RBP35.24■■■■□ 3.23
CLDND1-230ENST00000514537 CFAP65Q6ZU64 1925 aaKnown RBP35.23■■■■□ 3.23
CLDND1-230ENST00000514537 NEURL4Q96JN8 1562 aa35.2■■■■□ 3.23
CLDND1-230ENST00000514537 RRBP1Q9P2E9 1410 aaKnown RBP35.17■■■■□ 3.22
CLDND1-230ENST00000514537 EFCAB6Q5THR3 1501 aa35.15■■■■□ 3.22
CLDND1-230ENST00000514537 MED14O60244 1454 aa35.15■■■■□ 3.22
CLDND1-230ENST00000514537 POLR1AO95602 1720 aaPredicted RBP35.14■■■■□ 3.22
CLDND1-230ENST00000514537 NOS1P29475 1434 aa35.14■■■■□ 3.22
CLDND1-230ENST00000514537 NPHP4O75161 1426 aaPredicted RBP35.13■■■■□ 3.21
CLDND1-230ENST00000514537 IDI1Q13907 227 aa35.12■■■■□ 3.21
CLDND1-230ENST00000514537 IQSEC2Q5JU85 1478 aa35.1■■■■□ 3.21
CLDND1-230ENST00000514537 UBR1Q8IWV7 1749 aa35.1■■■■□ 3.21
CLDND1-230ENST00000514537 RPRD2Q5VT52 1461 aaKnown RBP35.08■■■■□ 3.21
CLDND1-230ENST00000514537 UNC13BO14795 1591 aa35.07■■■■□ 3.2
CLDND1-230ENST00000514537 ARHGAP23Q9P227 1491 aa35.06■■■■□ 3.2
CLDND1-230ENST00000514537 SLC52A1Q9NWF4 448 aa35.06■■■■□ 3.2
CLDND1-230ENST00000514537 LTKP29376 864 aa35.05■■■■□ 3.2
CLDND1-230ENST00000514537 STAG3Q9UJ98 1225 aa35.05■■■■□ 3.2
CLDND1-230ENST00000514537 SYNMO15061 1565 aa35.04■■■■□ 3.2
CLDND1-230ENST00000514537 TXNDC2Q86VQ3 553 aa35.04■■■■□ 3.2
CLDND1-230ENST00000514537 SLIT1O75093 1534 aa35.04■■■■□ 3.2
CLDND1-230ENST00000514537 PIK3C2BO00750 1634 aa35.03■■■■□ 3.2
CLDND1-230ENST00000514537 SCAF11Q99590 1463 aaKnown RBP35.02■■■■□ 3.2
CLDND1-230ENST00000514537 TET3O43151 1660 aa35.01■■■■□ 3.2
CLDND1-230ENST00000514537 NUP155O75694 1391 aa35■■■■□ 3.19
CLDND1-230ENST00000514537 TMEM2Q9UHN6 1383 aa35■■■■□ 3.19
CLDND1-230ENST00000514537 EID1Q9Y6B2 187 aa34.99■■■■□ 3.19
CLDND1-230ENST00000514537 IQGAP1P46940 1657 aa34.97■■■■□ 3.19
CLDND1-230ENST00000514537 CPS1P31327 1500 aa34.94■■■■□ 3.18
CLDND1-230ENST00000514537 KDM5AP29375 1690 aaKnown RBP34.94■■■■□ 3.18
CLDND1-230ENST00000514537 IQGAP3Q86VI3 1631 aa34.93■■■■□ 3.18
CLDND1-230ENST00000514537 GCC2Q8IWJ2 1684 aa34.92■■■■□ 3.18
CLDND1-230ENST00000514537 ADGRB3O60242 1522 aa34.89■■■■□ 3.18
CLDND1-230ENST00000514537 NAIPQ13075 1403 aa34.89■■■■□ 3.18
CLDND1-230ENST00000514537 UBAP1LF5GYI3 381 aa34.87■■■■□ 3.17
CLDND1-230ENST00000514537 E9PCH4 1651 aa34.86■■■■□ 3.17
CLDND1-230ENST00000514537 HFM1A2PYH4 1435 aa34.8■■■■□ 3.16
CLDND1-230ENST00000514537 ZFYVE9O95405 1425 aa34.75■■■■□ 3.15
CLDND1-230ENST00000514537 CHGAP10645 457 aaKnown RBP34.75■■■■□ 3.15
CLDND1-230ENST00000514537 HDGFP51858 240 aaKnown RBP34.75■■■■□ 3.15
CLDND1-230ENST00000514537 TMEM131LA2VDJ0 1609 aa34.74■■■■□ 3.15
CLDND1-230ENST00000514537 STRCP1A6NGW2 1772 aa34.73■■■■□ 3.15
CLDND1-230ENST00000514537 LRRC7Q96NW7 1537 aa34.73■■■■□ 3.15
CLDND1-230ENST00000514537 RIMS2Q9UQ26 1411 aa34.72■■■■□ 3.15
CLDND1-230ENST00000514537 TOM1O60784 492 aa34.72■■■■□ 3.15
CLDND1-230ENST00000514537 SLC26A8Q96RN1 970 aa34.72■■■■□ 3.15
CLDND1-230ENST00000514537 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms