RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 TSPY10P0CW01 314 aa16.63■□□□□ 0.25
DDX41-211ENST00000510171 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
DDX41-211ENST00000510171 ANKLE2Q86XL3 938 aa16.61■□□□□ 0.25
DDX41-211ENST00000510171 THEMISQ8N1K5 641 aaPredicted RBP16.61■□□□□ 0.25
DDX41-211ENST00000510171 CCDC141Q6ZP82 1450 aa16.61■□□□□ 0.25
DDX41-211ENST00000510171 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
DDX41-211ENST00000510171 ADGBQ8N7X0 1667 aa16.6■□□□□ 0.25
DDX41-211ENST00000510171 ZNF142P52746 1687 aaPredicted RBP16.59■□□□□ 0.25
DDX41-211ENST00000510171 TOM1O60784 492 aa16.59■□□□□ 0.25
DDX41-211ENST00000510171 NCOA2Q15596 1464 aa16.59■□□□□ 0.25
DDX41-211ENST00000510171 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
DDX41-211ENST00000510171 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
DDX41-211ENST00000510171 PZPP20742 1482 aa16.57■□□□□ 0.24
DDX41-211ENST00000510171 PIP4K2BP78356 416 aa16.57■□□□□ 0.24
DDX41-211ENST00000510171 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
DDX41-211ENST00000510171 CAMSAP2Q08AD1 1489 aa16.56■□□□□ 0.24
DDX41-211ENST00000510171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDX41-211ENST00000510171 KDM5DQ9BY66 1539 aa16.55■□□□□ 0.24
DDX41-211ENST00000510171 HSPA1LP34931 641 aa16.54■□□□□ 0.24
DDX41-211ENST00000510171 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
DDX41-211ENST00000510171 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
DDX41-211ENST00000510171 NLRP1Q9C000 1473 aa16.52■□□□□ 0.23
DDX41-211ENST00000510171 CPS1P31327 1500 aa16.51■□□□□ 0.23
DDX41-211ENST00000510171 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
DDX41-211ENST00000510171 UGGT1Q9NYU2 1555 aa16.48■□□□□ 0.23
DDX41-211ENST00000510171 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
DDX41-211ENST00000510171 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
DDX41-211ENST00000510171 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
DDX41-211ENST00000510171 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
DDX41-211ENST00000510171 MED14O60244 1454 aa16.47■□□□□ 0.23
DDX41-211ENST00000510171 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
DDX41-211ENST00000510171 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
DDX41-211ENST00000510171 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
DDX41-211ENST00000510171 ABCC3O15438 1527 aa16.42■□□□□ 0.22
DDX41-211ENST00000510171 MYOM3Q5VTT5 1437 aa16.41■□□□□ 0.22
DDX41-211ENST00000510171 ERVK-7P63135 1459 aa16.41■□□□□ 0.22
DDX41-211ENST00000510171 TXNDC2Q86VQ3 553 aa16.4■□□□□ 0.22
DDX41-211ENST00000510171 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
DDX41-211ENST00000510171 DEPDC5O75140 1603 aa16.4■□□□□ 0.22
DDX41-211ENST00000510171 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
DDX41-211ENST00000510171 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
DDX41-211ENST00000510171 MAST1Q9Y2H9 1570 aa16.38■□□□□ 0.21
DDX41-211ENST00000510171 LTKP29376 864 aa16.38■□□□□ 0.21
DDX41-211ENST00000510171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.213e-8■■□□□ 14.5
DDX41-211ENST00000510171 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
DDX41-211ENST00000510171 EID1Q9Y6B2 187 aa16.38■□□□□ 0.21
DDX41-211ENST00000510171 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
DDX41-211ENST00000510171 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
DDX41-211ENST00000510171 LRRC7Q96NW7 1537 aa16.36■□□□□ 0.21
DDX41-211ENST00000510171 APLP2Q06481 763 aa16.36■□□□□ 0.21
DDX41-211ENST00000510171 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
DDX41-211ENST00000510171 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
DDX41-211ENST00000510171 MED1Q15648 1581 aaPredicted RBP16.35■□□□□ 0.21
DDX41-211ENST00000510171 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
DDX41-211ENST00000510171 ARHGAP31Q2M1Z3 1444 aa16.34■□□□□ 0.21
DDX41-211ENST00000510171 SCAF11Q99590 1463 aaKnown RBP16.34■□□□□ 0.21
DDX41-211ENST00000510171 ABCC5O15440 1437 aa16.33■□□□□ 0.2
DDX41-211ENST00000510171 EIF2AK4Q9P2K8 1649 aaKnown RBP16.33■□□□□ 0.2
DDX41-211ENST00000510171 IQGAP1P46940 1657 aa16.33■□□□□ 0.2
DDX41-211ENST00000510171 ZC3H13Q5T200 1668 aaKnown RBP16.33■□□□□ 0.2
DDX41-211ENST00000510171 ALKQ9UM73 1620 aa16.32■□□□□ 0.2
DDX41-211ENST00000510171 MROH1Q8NDA8 1641 aa16.31■□□□□ 0.2
DDX41-211ENST00000510171 KANK1Q14678 1352 aa16.31■□□□□ 0.2
DDX41-211ENST00000510171 ARHGAP23Q9P227 1491 aa16.3■□□□□ 0.2
DDX41-211ENST00000510171 ERBINQ96RT1 1412 aa16.3■□□□□ 0.2
DDX41-211ENST00000510171 TMEM2Q9UHN6 1383 aa16.29■□□□□ 0.2
DDX41-211ENST00000510171 IDI1Q13907 227 aa16.29■□□□□ 0.2
DDX41-211ENST00000510171 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
DDX41-211ENST00000510171 SLIT1O75093 1534 aa16.29■□□□□ 0.2
DDX41-211ENST00000510171 DAPK1P53355 1430 aa16.27■□□□□ 0.19
DDX41-211ENST00000510171 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
DDX41-211ENST00000510171 KCNA6P17658 529 aa16.26■□□□□ 0.19
DDX41-211ENST00000510171 PRDM15P57071 1507 aaPredicted RBP16.25■□□□□ 0.19
DDX41-211ENST00000510171 SLC26A8Q96RN1 970 aa16.25■□□□□ 0.19
DDX41-211ENST00000510171 SYNMO15061 1565 aa16.25■□□□□ 0.19
DDX41-211ENST00000510171 UBR1Q8IWV7 1749 aa16.25■□□□□ 0.19
DDX41-211ENST00000510171 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
DDX41-211ENST00000510171 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
DDX41-211ENST00000510171 CEP152O94986 1710 aa16.23■□□□□ 0.19
DDX41-211ENST00000510171 FAM135BQ49AJ0 1406 aa16.23■□□□□ 0.19
DDX41-211ENST00000510171 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
DDX41-211ENST00000510171 FGD6Q6ZV73 1430 aa16.22■□□□□ 0.19
DDX41-211ENST00000510171 BCANQ96GW7 911 aa16.22■□□□□ 0.19
DDX41-211ENST00000510171 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
DDX41-211ENST00000510171 RGS17Q9UGC6 210 aaPredicted RBP16.22■□□□□ 0.19
DDX41-211ENST00000510171 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
DDX41-211ENST00000510171 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
DDX41-211ENST00000510171 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
DDX41-211ENST00000510171 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
DDX41-211ENST00000510171 CFAP65Q6ZU64 1925 aaKnown RBP16.18■□□□□ 0.18
DDX41-211ENST00000510171 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
DDX41-211ENST00000510171 NOS1P29475 1434 aa16.18■□□□□ 0.18
DDX41-211ENST00000510171 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
DDX41-211ENST00000510171 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
DDX41-211ENST00000510171 PPP1R15AO75807 674 aaPredicted RBP16.14■□□□□ 0.17
DDX41-211ENST00000510171 SLAIN2Q9P270 581 aa16.14■□□□□ 0.17
DDX41-211ENST00000510171 TET3O43151 1660 aa16.14■□□□□ 0.17
DDX41-211ENST00000510171 MSH6P52701 1360 aa16.13■□□□□ 0.17
DDX41-211ENST00000510171 CROCC2H7BZ55 1655 aa16.13■□□□□ 0.17
DDX41-211ENST00000510171 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms