RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
CALCOCO2-214ENST00000509415 POLR1AO95602 1720 aaPredicted RBP16.85■□□□□ 0.29
CALCOCO2-214ENST00000509415 KIF3BO15066 747 aa16.84■□□□□ 0.29
CALCOCO2-214ENST00000509415 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
CALCOCO2-214ENST00000509415 TCOF1Q13428 1488 aaKnown RBP16.84■□□□□ 0.29
CALCOCO2-214ENST00000509415 IQSEC2Q5JU85 1478 aa16.84■□□□□ 0.29
CALCOCO2-214ENST00000509415 TSPY4P0CV99 314 aa16.83■□□□□ 0.28
CALCOCO2-214ENST00000509415 TSPY10P0CW01 314 aa16.83■□□□□ 0.28
CALCOCO2-214ENST00000509415 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
CALCOCO2-214ENST00000509415 NCKAP5LQ9HCH0 1330 aa16.83■□□□□ 0.28
CALCOCO2-214ENST00000509415 PZPP20742 1482 aa16.82■□□□□ 0.28
CALCOCO2-214ENST00000509415 PKD2Q13563 968 aa16.82■□□□□ 0.28
CALCOCO2-214ENST00000509415 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
CALCOCO2-214ENST00000509415 EIF2AK4Q9P2K8 1649 aaKnown RBP16.81■□□□□ 0.28
CALCOCO2-214ENST00000509415 CFAP65Q6ZU64 1925 aaKnown RBP16.8■□□□□ 0.28
CALCOCO2-214ENST00000509415 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
CALCOCO2-214ENST00000509415 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
CALCOCO2-214ENST00000509415 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
CALCOCO2-214ENST00000509415 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
CALCOCO2-214ENST00000509415 CROCC2H7BZ55 1655 aa16.78■□□□□ 0.28
CALCOCO2-214ENST00000509415 TNRQ92752 1358 aa16.78■□□□□ 0.28
CALCOCO2-214ENST00000509415 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
CALCOCO2-214ENST00000509415 CEP152O94986 1710 aa16.76■□□□□ 0.27
CALCOCO2-214ENST00000509415 FBXO31Q5XUX0 539 aaPredicted RBP16.76■□□□□ 0.27
CALCOCO2-214ENST00000509415 ZNF335Q9H4Z2 1342 aaPredicted RBP16.75■□□□□ 0.27
CALCOCO2-214ENST00000509415 NEURL4Q96JN8 1562 aa16.75■□□□□ 0.27
CALCOCO2-214ENST00000509415 ABCC3O15438 1527 aa16.75■□□□□ 0.27
CALCOCO2-214ENST00000509415 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
CALCOCO2-214ENST00000509415 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
CALCOCO2-214ENST00000509415 NLRP1Q9C000 1473 aa16.73■□□□□ 0.27
CALCOCO2-214ENST00000509415 DUOX2Q9NRD8 1548 aa16.73■□□□□ 0.27
CALCOCO2-214ENST00000509415 SPATA31D1Q6ZQQ2 1576 aa16.72■□□□□ 0.27
CALCOCO2-214ENST00000509415 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
CALCOCO2-214ENST00000509415 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
CALCOCO2-214ENST00000509415 SHANK2Q9UPX8 1470 aa16.7■□□□□ 0.26
CALCOCO2-214ENST00000509415 APLP2Q06481 763 aa16.69■□□□□ 0.26
CALCOCO2-214ENST00000509415 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
CALCOCO2-214ENST00000509415 IQGAP1P46940 1657 aa16.68■□□□□ 0.26
CALCOCO2-214ENST00000509415 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
CALCOCO2-214ENST00000509415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
CALCOCO2-214ENST00000509415 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
CALCOCO2-214ENST00000509415 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
CALCOCO2-214ENST00000509415 ABCC5O15440 1437 aa16.66■□□□□ 0.26
CALCOCO2-214ENST00000509415 ANKLE2Q86XL3 938 aa16.66■□□□□ 0.26
CALCOCO2-214ENST00000509415 MED14O60244 1454 aa16.66■□□□□ 0.26
CALCOCO2-214ENST00000509415 CPS1P31327 1500 aa16.65■□□□□ 0.26
CALCOCO2-214ENST00000509415 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
CALCOCO2-214ENST00000509415 ERBINQ96RT1 1412 aa16.65■□□□□ 0.26
CALCOCO2-214ENST00000509415 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
CALCOCO2-214ENST00000509415 DAPK1P53355 1430 aa16.64■□□□□ 0.25
CALCOCO2-214ENST00000509415 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
CALCOCO2-214ENST00000509415 UBAP1LF5GYI3 381 aa16.64■□□□□ 0.25
CALCOCO2-214ENST00000509415 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
CALCOCO2-214ENST00000509415 NPHP4O75161 1426 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO2-214ENST00000509415 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
CALCOCO2-214ENST00000509415 ARHGAP31Q2M1Z3 1444 aa16.61■□□□□ 0.25
CALCOCO2-214ENST00000509415 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
CALCOCO2-214ENST00000509415 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
CALCOCO2-214ENST00000509415 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
CALCOCO2-214ENST00000509415 SYNMO15061 1565 aa16.56■□□□□ 0.24
CALCOCO2-214ENST00000509415 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
CALCOCO2-214ENST00000509415 SLIT1O75093 1534 aa16.55■□□□□ 0.24
CALCOCO2-214ENST00000509415 LMTK2Q8IWU2 1503 aa16.55■□□□□ 0.24
CALCOCO2-214ENST00000509415 KANK1Q14678 1352 aa16.55■□□□□ 0.24
CALCOCO2-214ENST00000509415 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
CALCOCO2-214ENST00000509415 ILDR2Q71H61 639 aa16.54■□□□□ 0.24
CALCOCO2-214ENST00000509415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.242e-7■■□□□ 12.6
CALCOCO2-214ENST00000509415 ADGRL2O95490 1459 aa16.54■□□□□ 0.24
CALCOCO2-214ENST00000509415 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
CALCOCO2-214ENST00000509415 TOM1O60784 492 aa16.53■□□□□ 0.24
CALCOCO2-214ENST00000509415 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
CALCOCO2-214ENST00000509415 ALKQ9UM73 1620 aa16.52■□□□□ 0.23
CALCOCO2-214ENST00000509415 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
CALCOCO2-214ENST00000509415 XIRP1Q702N8 1843 aaKnown RBP16.51■□□□□ 0.23
CALCOCO2-214ENST00000509415 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
CALCOCO2-214ENST00000509415 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
CALCOCO2-214ENST00000509415 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
CALCOCO2-214ENST00000509415 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
CALCOCO2-214ENST00000509415 LTKP29376 864 aa16.48■□□□□ 0.23
CALCOCO2-214ENST00000509415 TXNDC2Q86VQ3 553 aa16.48■□□□□ 0.23
CALCOCO2-214ENST00000509415 HSPA1LP34931 641 aa16.47■□□□□ 0.23
CALCOCO2-214ENST00000509415 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
CALCOCO2-214ENST00000509415 TET3O43151 1660 aa16.46■□□□□ 0.23
CALCOCO2-214ENST00000509415 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
CALCOCO2-214ENST00000509415 EID1Q9Y6B2 187 aa16.46■□□□□ 0.23
CALCOCO2-214ENST00000509415 TMEM2Q9UHN6 1383 aa16.46■□□□□ 0.23
CALCOCO2-214ENST00000509415 NOS1P29475 1434 aa16.45■□□□□ 0.22
CALCOCO2-214ENST00000509415 SOCS7O14512 581 aa16.45■□□□□ 0.22
CALCOCO2-214ENST00000509415 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
CALCOCO2-214ENST00000509415 ADGRB3O60242 1522 aa16.45■□□□□ 0.22
CALCOCO2-214ENST00000509415 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
CALCOCO2-214ENST00000509415 UNC13BO14795 1591 aa16.43■□□□□ 0.22
CALCOCO2-214ENST00000509415 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO2-214ENST00000509415 RPRD2Q5VT52 1461 aaKnown RBP16.43■□□□□ 0.22
CALCOCO2-214ENST00000509415 IDI1Q13907 227 aa16.43■□□□□ 0.22
CALCOCO2-214ENST00000509415 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
CALCOCO2-214ENST00000509415 E9PCH4 1651 aa16.39■□□□□ 0.21
CALCOCO2-214ENST00000509415 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
CALCOCO2-214ENST00000509415 IQGAP3Q86VI3 1631 aa16.37■□□□□ 0.21
CALCOCO2-214ENST00000509415 CHD2O14647 1828 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms