RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
CALCOCO2-214ENST00000509415 CCDC180Q9P1Z9 1646 aa24.01■■□□□ 1.43
CALCOCO2-214ENST00000509415 ABCC9O60706 1549 aa23.86■■□□□ 1.41
CALCOCO2-214ENST00000509415 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
CALCOCO2-214ENST00000509415 NACADO15069 1562 aa22.63■■□□□ 1.21
CALCOCO2-214ENST00000509415 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
CALCOCO2-214ENST00000509415 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
CALCOCO2-214ENST00000509415 MYO15BQ96JP2 1530 aa22.33■■□□□ 1.17
CALCOCO2-214ENST00000509415 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
CALCOCO2-214ENST00000509415 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
CALCOCO2-214ENST00000509415 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
CALCOCO2-214ENST00000509415 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
CALCOCO2-214ENST00000509415 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
CALCOCO2-214ENST00000509415 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
CALCOCO2-214ENST00000509415 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
CALCOCO2-214ENST00000509415 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
CALCOCO2-214ENST00000509415 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
CALCOCO2-214ENST00000509415 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
CALCOCO2-214ENST00000509415 NCAPD3P42695 1498 aa20.85■□□□□ 0.93
CALCOCO2-214ENST00000509415 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
CALCOCO2-214ENST00000509415 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
CALCOCO2-214ENST00000509415 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
CALCOCO2-214ENST00000509415 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
CALCOCO2-214ENST00000509415 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
CALCOCO2-214ENST00000509415 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
CALCOCO2-214ENST00000509415 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
CALCOCO2-214ENST00000509415 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
CALCOCO2-214ENST00000509415 CUX2O14529 1486 aa20.59■□□□□ 0.89
CALCOCO2-214ENST00000509415 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
CALCOCO2-214ENST00000509415 NESP48681 1621 aa20.51■□□□□ 0.87
CALCOCO2-214ENST00000509415 DNAJC5Q9H3Z4 198 aa20.49■□□□□ 0.87
CALCOCO2-214ENST00000509415 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
CALCOCO2-214ENST00000509415 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
CALCOCO2-214ENST00000509415 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
CALCOCO2-214ENST00000509415 WIZO95785 1651 aa20.34■□□□□ 0.85
CALCOCO2-214ENST00000509415 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.83
CALCOCO2-214ENST00000509415 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
CALCOCO2-214ENST00000509415 MRC2Q9UBG0 1479 aa20.1■□□□□ 0.81
CALCOCO2-214ENST00000509415 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
CALCOCO2-214ENST00000509415 WDR62O43379 1518 aa20.07■□□□□ 0.8
CALCOCO2-214ENST00000509415 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
CALCOCO2-214ENST00000509415 CEP164Q9UPV0 1460 aa20.03■□□□□ 0.8
CALCOCO2-214ENST00000509415 CFTRP13569 1480 aa20■□□□□ 0.79
CALCOCO2-214ENST00000509415 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
CALCOCO2-214ENST00000509415 PRDM2Q13029 1718 aa19.98■□□□□ 0.79
CALCOCO2-214ENST00000509415 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.77
CALCOCO2-214ENST00000509415 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
CALCOCO2-214ENST00000509415 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
CALCOCO2-214ENST00000509415 TOPBP1Q92547 1522 aa19.63■□□□□ 0.73
CALCOCO2-214ENST00000509415 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
CALCOCO2-214ENST00000509415 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
CALCOCO2-214ENST00000509415 OSCARQ8IYS5 282 aa19.6■□□□□ 0.73
CALCOCO2-214ENST00000509415 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
CALCOCO2-214ENST00000509415 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
CALCOCO2-214ENST00000509415 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
CALCOCO2-214ENST00000509415 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
CALCOCO2-214ENST00000509415 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
CALCOCO2-214ENST00000509415 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
CALCOCO2-214ENST00000509415 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
CALCOCO2-214ENST00000509415 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
CALCOCO2-214ENST00000509415 CHD1O14646 1710 aa19.42■□□□□ 0.7
CALCOCO2-214ENST00000509415 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
CALCOCO2-214ENST00000509415 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
CALCOCO2-214ENST00000509415 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.696e-13■■■■□ 26.1
CALCOCO2-214ENST00000509415 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
CALCOCO2-214ENST00000509415 RAD54L2Q9Y4B4 1467 aa19.33■□□□□ 0.68
CALCOCO2-214ENST00000509415 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
CALCOCO2-214ENST00000509415 SOGA1O94964 1423 aa19.31■□□□□ 0.68
CALCOCO2-214ENST00000509415 CUX1P39880 1505 aa19.3■□□□□ 0.68
CALCOCO2-214ENST00000509415 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
CALCOCO2-214ENST00000509415 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
CALCOCO2-214ENST00000509415 FBLN2P98095 1184 aa19.22■□□□□ 0.67
CALCOCO2-214ENST00000509415 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
CALCOCO2-214ENST00000509415 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
CALCOCO2-214ENST00000509415 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
CALCOCO2-214ENST00000509415 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
CALCOCO2-214ENST00000509415 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
CALCOCO2-214ENST00000509415 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
CALCOCO2-214ENST00000509415 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
CALCOCO2-214ENST00000509415 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
CALCOCO2-214ENST00000509415 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
CALCOCO2-214ENST00000509415 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
CALCOCO2-214ENST00000509415 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
CALCOCO2-214ENST00000509415 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
CALCOCO2-214ENST00000509415 CHMP7Q8WUX9 453 aaPredicted RBP19.1■□□□□ 0.65
CALCOCO2-214ENST00000509415 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
CALCOCO2-214ENST00000509415 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
CALCOCO2-214ENST00000509415 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
CALCOCO2-214ENST00000509415 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
CALCOCO2-214ENST00000509415 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
CALCOCO2-214ENST00000509415 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
CALCOCO2-214ENST00000509415 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
CALCOCO2-214ENST00000509415 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
CALCOCO2-214ENST00000509415 CEP170Q5SW79 1584 aa18.87■□□□□ 0.61
CALCOCO2-214ENST00000509415 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
CALCOCO2-214ENST00000509415 NUP160Q12769 1436 aa18.85■□□□□ 0.61
CALCOCO2-214ENST00000509415 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
CALCOCO2-214ENST00000509415 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
CALCOCO2-214ENST00000509415 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
CALCOCO2-214ENST00000509415 CUL7Q14999 1698 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms