RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 PKD2Q13563 968 aa24.38■■□□□ 1.49
SMAD5-205ENST00000509297 KDM5DQ9BY66 1539 aa24.38■■□□□ 1.49
SMAD5-205ENST00000509297 LTBP4Q8N2S1 1624 aa24.38■■□□□ 1.49
SMAD5-205ENST00000509297 KANK4Q5T7N3 995 aaPredicted RBP24.37■■□□□ 1.49
SMAD5-205ENST00000509297 TCOF1Q13428 1488 aaKnown RBP24.37■■□□□ 1.49
SMAD5-205ENST00000509297 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
SMAD5-205ENST00000509297 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
SMAD5-205ENST00000509297 IQSEC2Q5JU85 1478 aa24.36■■□□□ 1.49
SMAD5-205ENST00000509297 A2ML1A8K2U0 1454 aa24.35■■□□□ 1.49
SMAD5-205ENST00000509297 PZPP20742 1482 aa24.35■■□□□ 1.49
SMAD5-205ENST00000509297 WASHC2CQ9Y4E1 1318 aa24.34■■□□□ 1.49
SMAD5-205ENST00000509297 NCKAP5LQ9HCH0 1330 aa24.33■■□□□ 1.48
SMAD5-205ENST00000509297 TNRQ92752 1358 aa24.3■■□□□ 1.48
SMAD5-205ENST00000509297 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
SMAD5-205ENST00000509297 RNF17Q9BXT8 1623 aaKnown RBP24.29■■□□□ 1.48
SMAD5-205ENST00000509297 FBXO31Q5XUX0 539 aaPredicted RBP24.28■■□□□ 1.48
SMAD5-205ENST00000509297 EIF2AK4Q9P2K8 1649 aaKnown RBP24.27■■□□□ 1.48
SMAD5-205ENST00000509297 NLRP1Q9C000 1473 aa24.24■■□□□ 1.47
SMAD5-205ENST00000509297 APLP2Q06481 763 aa24.23■■□□□ 1.47
SMAD5-205ENST00000509297 ZC3H13Q5T200 1668 aaKnown RBP24.23■■□□□ 1.47
SMAD5-205ENST00000509297 ABCC3O15438 1527 aa24.22■■□□□ 1.47
SMAD5-205ENST00000509297 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
SMAD5-205ENST00000509297 DUOX2Q9NRD8 1548 aa24.21■■□□□ 1.47
SMAD5-205ENST00000509297 ZNF335Q9H4Z2 1342 aaPredicted RBP24.21■■□□□ 1.47
SMAD5-205ENST00000509297 MROH1Q8NDA8 1641 aa24.18■■□□□ 1.46
SMAD5-205ENST00000509297 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
SMAD5-205ENST00000509297 ABCC5O15440 1437 aa24.18■■□□□ 1.46
SMAD5-205ENST00000509297 SPATA31D1Q6ZQQ2 1576 aa24.16■■□□□ 1.46
SMAD5-205ENST00000509297 PTPN23Q9H3S7 1636 aa24.16■■□□□ 1.46
SMAD5-205ENST00000509297 NEURL4Q96JN8 1562 aa24.16■■□□□ 1.46
SMAD5-205ENST00000509297 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
SMAD5-205ENST00000509297 UGGT1Q9NYU2 1555 aa24.15■■□□□ 1.46
SMAD5-205ENST00000509297 KIF15Q9NS87 1388 aa24.15■■□□□ 1.46
SMAD5-205ENST00000509297 FGD6Q6ZV73 1430 aa24.14■■□□□ 1.45
SMAD5-205ENST00000509297 ANKLE2Q86XL3 938 aa24.14■■□□□ 1.45
SMAD5-205ENST00000509297 ERBINQ96RT1 1412 aa24.14■■□□□ 1.45
SMAD5-205ENST00000509297 CROCC2H7BZ55 1655 aa24.14■■□□□ 1.45
SMAD5-205ENST00000509297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMAD5-205ENST00000509297 MED14O60244 1454 aa24.12■■□□□ 1.45
SMAD5-205ENST00000509297 ERVK-7P63135 1459 aa24.12■■□□□ 1.45
SMAD5-205ENST00000509297 DAPK1P53355 1430 aa24.11■■□□□ 1.45
SMAD5-205ENST00000509297 PRDM15P57071 1507 aaPredicted RBP24.11■■□□□ 1.45
SMAD5-205ENST00000509297 DEPDC5O75140 1603 aa24.11■■□□□ 1.45
SMAD5-205ENST00000509297 ARHGAP31Q2M1Z3 1444 aa24.1■■□□□ 1.45
SMAD5-205ENST00000509297 CPS1P31327 1500 aa24.08■■□□□ 1.45
SMAD5-205ENST00000509297 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
SMAD5-205ENST00000509297 CEP152O94986 1710 aa24.05■■□□□ 1.44
SMAD5-205ENST00000509297 NPHP4O75161 1426 aaPredicted RBP24.05■■□□□ 1.44
SMAD5-205ENST00000509297 UBAP1LF5GYI3 381 aa24.05■■□□□ 1.44
SMAD5-205ENST00000509297 ANKRD30AQ9BXX3 1397 aa24.03■■□□□ 1.44
SMAD5-205ENST00000509297 VWDEQ8N2E2 1590 aa24.02■■□□□ 1.44
SMAD5-205ENST00000509297 KANK1Q14678 1352 aa24■■□□□ 1.43
SMAD5-205ENST00000509297 LMTK2Q8IWU2 1503 aa23.99■■□□□ 1.43
SMAD5-205ENST00000509297 IQGAP1P46940 1657 aa23.99■■□□□ 1.43
SMAD5-205ENST00000509297 ADGRL2O95490 1459 aa23.98■■□□□ 1.43
SMAD5-205ENST00000509297 UBR1Q8IWV7 1749 aa23.98■■□□□ 1.43
SMAD5-205ENST00000509297 DISP3Q9P2K9 1392 aa23.97■■□□□ 1.43
SMAD5-205ENST00000509297 SLIT1O75093 1534 aa23.95■■□□□ 1.43
SMAD5-205ENST00000509297 ARHGAP23Q9P227 1491 aa23.95■■□□□ 1.42
SMAD5-205ENST00000509297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.94■■□□□ 1.42
SMAD5-205ENST00000509297 CHIC2Q9UKJ5 165 aa23.94■■□□□ 1.42
SMAD5-205ENST00000509297 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
SMAD5-205ENST00000509297 TOM1O60784 492 aa23.92■■□□□ 1.42
SMAD5-205ENST00000509297 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
SMAD5-205ENST00000509297 KDM5AP29375 1690 aaKnown RBP23.89■■□□□ 1.42
SMAD5-205ENST00000509297 LTKP29376 864 aa23.87■■□□□ 1.41
SMAD5-205ENST00000509297 FAM50AQ14320 339 aaKnown RBP23.87■■□□□ 1.41
SMAD5-205ENST00000509297 TXNDC2Q86VQ3 553 aa23.87■■□□□ 1.41
SMAD5-205ENST00000509297 EFCAB6Q5THR3 1501 aa23.87■■□□□ 1.41
SMAD5-205ENST00000509297 PIK3C2BO00750 1634 aa23.87■■□□□ 1.41
SMAD5-205ENST00000509297 TMEM2Q9UHN6 1383 aa23.87■■□□□ 1.41
SMAD5-205ENST00000509297 NOS1P29475 1434 aa23.86■■□□□ 1.41
SMAD5-205ENST00000509297 EID1Q9Y6B2 187 aa23.86■■□□□ 1.41
SMAD5-205ENST00000509297 SYNMO15061 1565 aa23.86■■□□□ 1.41
SMAD5-205ENST00000509297 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
SMAD5-205ENST00000509297 LRRC7Q96NW7 1537 aa23.85■■□□□ 1.41
SMAD5-205ENST00000509297 STRCP1A6NGW2 1772 aa23.83■■□□□ 1.41
SMAD5-205ENST00000509297 RPRD2Q5VT52 1461 aaKnown RBP23.83■■□□□ 1.41
SMAD5-205ENST00000509297 IDI1Q13907 227 aa23.83■■□□□ 1.41
SMAD5-205ENST00000509297 ILDR2Q71H61 639 aa23.83■■□□□ 1.41
SMAD5-205ENST00000509297 ALKQ9UM73 1620 aa23.81■■□□□ 1.4
SMAD5-205ENST00000509297 PIP4K2BP78356 416 aa23.81■■□□□ 1.4
SMAD5-205ENST00000509297 SLC52A1Q9NWF4 448 aa23.81■■□□□ 1.4
SMAD5-205ENST00000509297 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
SMAD5-205ENST00000509297 HSPA1LP34931 641 aa23.79■■□□□ 1.4
SMAD5-205ENST00000509297 SCAF1Q9H7N4 1312 aaKnown RBP23.79■■□□□ 1.4
SMAD5-205ENST00000509297 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
SMAD5-205ENST00000509297 ADGRB3O60242 1522 aa23.77■■□□□ 1.4
SMAD5-205ENST00000509297 SOCS7O14512 581 aa23.75■■□□□ 1.39
SMAD5-205ENST00000509297 TET3O43151 1660 aa23.74■■□□□ 1.39
SMAD5-205ENST00000509297 UNC13BO14795 1591 aa23.74■■□□□ 1.39
SMAD5-205ENST00000509297 GCC2Q8IWJ2 1684 aa23.69■■□□□ 1.38
SMAD5-205ENST00000509297 KCNA6P17658 529 aa23.67■■□□□ 1.38
SMAD5-205ENST00000509297 ZFYVE9O95405 1425 aa23.66■■□□□ 1.38
SMAD5-205ENST00000509297 XIRP1Q702N8 1843 aaKnown RBP23.64■■□□□ 1.38
SMAD5-205ENST00000509297 IQGAP3Q86VI3 1631 aa23.64■■□□□ 1.38
SMAD5-205ENST00000509297 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.37
SMAD5-205ENST00000509297 MED1Q15648 1581 aaPredicted RBP23.64■■□□□ 1.37
SMAD5-205ENST00000509297 SLC26A8Q96RN1 970 aa23.63■■□□□ 1.37
SMAD5-205ENST00000509297 TMEM131LA2VDJ0 1609 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms