RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
POLR2J3-212ENST00000507355 NEURL4Q96JN8 1562 aa21.5■■□□□ 1.03
POLR2J3-212ENST00000507355 CPS1P31327 1500 aa21.48■■□□□ 1.03
POLR2J3-212ENST00000507355 TNRQ92752 1358 aa21.48■■□□□ 1.03
POLR2J3-212ENST00000507355 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
POLR2J3-212ENST00000507355 MBD5Q9P267 1494 aa21.46■■□□□ 1.03
POLR2J3-212ENST00000507355 SHANK2Q9UPX8 1470 aa21.46■■□□□ 1.03
POLR2J3-212ENST00000507355 TOM1O60784 492 aa21.46■■□□□ 1.03
POLR2J3-212ENST00000507355 CEP162Q5TB80 1403 aa21.46■■□□□ 1.03
POLR2J3-212ENST00000507355 DHX29Q7Z478 1369 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-212ENST00000507355 KDM5DQ9BY66 1539 aa21.44■■□□□ 1.02
POLR2J3-212ENST00000507355 KIF3BO15066 747 aa21.43■■□□□ 1.02
POLR2J3-212ENST00000507355 PZPP20742 1482 aa21.43■■□□□ 1.02
POLR2J3-212ENST00000507355 EHBP1L1Q8N3D4 1523 aa21.43■■□□□ 1.02
POLR2J3-212ENST00000507355 RTEL1-TNFRSF6BF6WH68 1400 aa21.42■■□□□ 1.02
POLR2J3-212ENST00000507355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.42■■□□□ 1.02
POLR2J3-212ENST00000507355 VWDEQ8N2E2 1590 aa21.4■■□□□ 1.02
POLR2J3-212ENST00000507355 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.01
POLR2J3-212ENST00000507355 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
POLR2J3-212ENST00000507355 CCDC141Q6ZP82 1450 aa21.38■■□□□ 1.01
POLR2J3-212ENST00000507355 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
POLR2J3-212ENST00000507355 UGGT1Q9NYU2 1555 aa21.36■■□□□ 1.01
POLR2J3-212ENST00000507355 FAM135AQ9P2D6 1515 aa21.36■■□□□ 1.01
POLR2J3-212ENST00000507355 CAMSAP2Q08AD1 1489 aa21.36■■□□□ 1.01
POLR2J3-212ENST00000507355 NPHP4O75161 1426 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-212ENST00000507355 THEMISQ8N1K5 641 aaPredicted RBP21.35■■□□□ 1.01
POLR2J3-212ENST00000507355 ALKQ9UM73 1620 aa21.35■■□□□ 1.01
POLR2J3-212ENST00000507355 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
POLR2J3-212ENST00000507355 NLRP1Q9C000 1473 aa21.34■■□□□ 1.01
POLR2J3-212ENST00000507355 DEPDC5O75140 1603 aa21.34■■□□□ 1.01
POLR2J3-212ENST00000507355 MIA2Q96PC5 1412 aa21.34■■□□□ 1.01
POLR2J3-212ENST00000507355 MED14O60244 1454 aa21.32■■□□□ 1
POLR2J3-212ENST00000507355 NCOA2Q15596 1464 aa21.32■■□□□ 1
POLR2J3-212ENST00000507355 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
POLR2J3-212ENST00000507355 STRCP1A6NGW2 1772 aa21.3■■□□□ 1
POLR2J3-212ENST00000507355 RNF17Q9BXT8 1623 aaKnown RBP21.28■■□□□ 1
POLR2J3-212ENST00000507355 LRRC7Q96NW7 1537 aa21.26■□□□□ 0.99
POLR2J3-212ENST00000507355 SYNMO15061 1565 aa21.26■□□□□ 0.99
POLR2J3-212ENST00000507355 ABCC3O15438 1527 aa21.24■□□□□ 0.99
POLR2J3-212ENST00000507355 ARHGEF5Q12774 1597 aa21.24■□□□□ 0.99
POLR2J3-212ENST00000507355 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
POLR2J3-212ENST00000507355 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
POLR2J3-212ENST00000507355 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
POLR2J3-212ENST00000507355 ZC3H13Q5T200 1668 aaKnown RBP21.23■□□□□ 0.99
POLR2J3-212ENST00000507355 ERVK-7P63135 1459 aa21.21■□□□□ 0.99
POLR2J3-212ENST00000507355 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
POLR2J3-212ENST00000507355 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
POLR2J3-212ENST00000507355 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-212ENST00000507355 CEP152O94986 1710 aa21.18■□□□□ 0.98
POLR2J3-212ENST00000507355 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
POLR2J3-212ENST00000507355 EIF2AK4Q9P2K8 1649 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-212ENST00000507355 SCAF11Q99590 1463 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-212ENST00000507355 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
POLR2J3-212ENST00000507355 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.98
POLR2J3-212ENST00000507355 MAP3K1Q13233 1512 aa21.12■□□□□ 0.97
POLR2J3-212ENST00000507355 XIRP1Q702N8 1843 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-212ENST00000507355 RGS17Q9UGC6 210 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-212ENST00000507355 LTKP29376 864 aa21.09■□□□□ 0.97
POLR2J3-212ENST00000507355 TXNDC2Q86VQ3 553 aa21.09■□□□□ 0.97
POLR2J3-212ENST00000507355 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
POLR2J3-212ENST00000507355 ARHGAP23Q9P227 1491 aa21.07■□□□□ 0.96
POLR2J3-212ENST00000507355 SLIT1O75093 1534 aa21.07■□□□□ 0.96
POLR2J3-212ENST00000507355 DUOX2Q9NRD8 1548 aa21.05■□□□□ 0.96
POLR2J3-212ENST00000507355 APLP2Q06481 763 aa21.05■□□□□ 0.96
POLR2J3-212ENST00000507355 EID1Q9Y6B2 187 aa21.04■□□□□ 0.96
POLR2J3-212ENST00000507355 PIK3C2BO00750 1634 aa21.04■□□□□ 0.96
POLR2J3-212ENST00000507355 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
POLR2J3-212ENST00000507355 KIF15Q9NS87 1388 aa20.99■□□□□ 0.95
POLR2J3-212ENST00000507355 ARHGAP31Q2M1Z3 1444 aa20.99■□□□□ 0.95
POLR2J3-212ENST00000507355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.95
POLR2J3-212ENST00000507355 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
POLR2J3-212ENST00000507355 ROBO1Q9Y6N7 1651 aa20.99■□□□□ 0.95
POLR2J3-212ENST00000507355 TMEM94Q12767 1356 aa20.98■□□□□ 0.95
POLR2J3-212ENST00000507355 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
POLR2J3-212ENST00000507355 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
POLR2J3-212ENST00000507355 POTEAQ6S8J7 498 aa20.98■□□□□ 0.95
POLR2J3-212ENST00000507355 CROCC2H7BZ55 1655 aa20.97■□□□□ 0.95
POLR2J3-212ENST00000507355 RBM33Q96EV2 1170 aaKnown RBP20.97■□□□□ 0.95
POLR2J3-212ENST00000507355 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
POLR2J3-212ENST00000507355 ABCC5O15440 1437 aa20.95■□□□□ 0.95
POLR2J3-212ENST00000507355 ERBINQ96RT1 1412 aa20.95■□□□□ 0.95
POLR2J3-212ENST00000507355 EFCAB6Q5THR3 1501 aa20.95■□□□□ 0.94
POLR2J3-212ENST00000507355 SLC26A8Q96RN1 970 aa20.93■□□□□ 0.94
POLR2J3-212ENST00000507355 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
POLR2J3-212ENST00000507355 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
POLR2J3-212ENST00000507355 PROSER2Q86WR7 435 aaPredicted RBP20.92■□□□□ 0.94
POLR2J3-212ENST00000507355 KCNA6P17658 529 aa20.91■□□□□ 0.94
POLR2J3-212ENST00000507355 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
POLR2J3-212ENST00000507355 KANK1Q14678 1352 aa20.91■□□□□ 0.94
POLR2J3-212ENST00000507355 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
POLR2J3-212ENST00000507355 DAPK1P53355 1430 aa20.89■□□□□ 0.94
POLR2J3-212ENST00000507355 IDI1Q13907 227 aa20.89■□□□□ 0.93
POLR2J3-212ENST00000507355 TET3O43151 1660 aa20.89■□□□□ 0.93
POLR2J3-212ENST00000507355 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
POLR2J3-212ENST00000507355 PHLPP1O60346 1717 aa20.87■□□□□ 0.93
POLR2J3-212ENST00000507355 BCANQ96GW7 911 aa20.87■□□□□ 0.93
POLR2J3-212ENST00000507355 NWD1Q149M9 1564 aa20.86■□□□□ 0.93
POLR2J3-212ENST00000507355 ADGRB3O60242 1522 aa20.86■□□□□ 0.93
POLR2J3-212ENST00000507355 NKTRP30414 1462 aaKnown RBP20.86■□□□□ 0.93
POLR2J3-212ENST00000507355 MSH6P52701 1360 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms