RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 ARHGEF5Q12774 1597 aa23.04■■□□□ 1.28
SEC24D-208ENST00000506622 IQSEC2Q5JU85 1478 aa23.02■■□□□ 1.27
SEC24D-208ENST00000506622 KDM5DQ9BY66 1539 aa23.01■■□□□ 1.27
SEC24D-208ENST00000506622 FBXO31Q5XUX0 539 aaPredicted RBP23.01■■□□□ 1.27
SEC24D-208ENST00000506622 A2ML1A8K2U0 1454 aa23.01■■□□□ 1.27
SEC24D-208ENST00000506622 FAM135AQ9P2D6 1515 aa23■■□□□ 1.27
SEC24D-208ENST00000506622 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
SEC24D-208ENST00000506622 TNRQ92752 1358 aa22.99■■□□□ 1.27
SEC24D-208ENST00000506622 ZNF335Q9H4Z2 1342 aaPredicted RBP22.99■■□□□ 1.27
SEC24D-208ENST00000506622 KANK4Q5T7N3 995 aaPredicted RBP22.98■■□□□ 1.27
SEC24D-208ENST00000506622 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
SEC24D-208ENST00000506622 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
SEC24D-208ENST00000506622 PZPP20742 1482 aa22.97■■□□□ 1.27
SEC24D-208ENST00000506622 MYOM3Q5VTT5 1437 aa22.93■■□□□ 1.26
SEC24D-208ENST00000506622 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
SEC24D-208ENST00000506622 MAST1Q9Y2H9 1570 aa22.92■■□□□ 1.26
SEC24D-208ENST00000506622 APLP2Q06481 763 aa22.91■■□□□ 1.26
SEC24D-208ENST00000506622 DISP3Q9P2K9 1392 aa22.9■■□□□ 1.26
SEC24D-208ENST00000506622 THEMISQ8N1K5 641 aaPredicted RBP22.9■■□□□ 1.26
SEC24D-208ENST00000506622 POLR1AO95602 1720 aaPredicted RBP22.89■■□□□ 1.26
SEC24D-208ENST00000506622 UBAP1LF5GYI3 381 aa22.89■■□□□ 1.26
SEC24D-208ENST00000506622 ANKLE2Q86XL3 938 aa22.88■■□□□ 1.25
SEC24D-208ENST00000506622 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
SEC24D-208ENST00000506622 NLRP1Q9C000 1473 aa22.87■■□□□ 1.25
SEC24D-208ENST00000506622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.25
SEC24D-208ENST00000506622 EIF2AK4Q9P2K8 1649 aaKnown RBP22.85■■□□□ 1.25
SEC24D-208ENST00000506622 ZC3H13Q5T200 1668 aaKnown RBP22.85■■□□□ 1.25
SEC24D-208ENST00000506622 UGGT1Q9NYU2 1555 aa22.85■■□□□ 1.25
SEC24D-208ENST00000506622 ABCC3O15438 1527 aa22.84■■□□□ 1.25
SEC24D-208ENST00000506622 CFAP65Q6ZU64 1925 aaKnown RBP22.84■■□□□ 1.25
SEC24D-208ENST00000506622 NEURL4Q96JN8 1562 aa22.82■■□□□ 1.24
SEC24D-208ENST00000506622 DUOX2Q9NRD8 1548 aa22.82■■□□□ 1.24
SEC24D-208ENST00000506622 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
SEC24D-208ENST00000506622 SPATA31D1Q6ZQQ2 1576 aa22.78■■□□□ 1.24
SEC24D-208ENST00000506622 CPS1P31327 1500 aa22.78■■□□□ 1.24
SEC24D-208ENST00000506622 CEP152O94986 1710 aa22.77■■□□□ 1.24
SEC24D-208ENST00000506622 MROH1Q8NDA8 1641 aa22.77■■□□□ 1.24
SEC24D-208ENST00000506622 PTPN23Q9H3S7 1636 aa22.77■■□□□ 1.24
SEC24D-208ENST00000506622 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
SEC24D-208ENST00000506622 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
SEC24D-208ENST00000506622 NPHP4O75161 1426 aaPredicted RBP22.76■■□□□ 1.23
SEC24D-208ENST00000506622 DEPDC5O75140 1603 aa22.76■■□□□ 1.23
SEC24D-208ENST00000506622 MED14O60244 1454 aa22.76■■□□□ 1.23
SEC24D-208ENST00000506622 ERVK-7P63135 1459 aa22.76■■□□□ 1.23
SEC24D-208ENST00000506622 ABCC5O15440 1437 aa22.76■■□□□ 1.23
SEC24D-208ENST00000506622 ILDR2Q71H61 639 aa22.75■■□□□ 1.23
SEC24D-208ENST00000506622 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
SEC24D-208ENST00000506622 TOM1O60784 492 aa22.74■■□□□ 1.23
SEC24D-208ENST00000506622 SCAF1Q9H7N4 1312 aaKnown RBP22.73■■□□□ 1.23
SEC24D-208ENST00000506622 ERBINQ96RT1 1412 aa22.73■■□□□ 1.23
SEC24D-208ENST00000506622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.72■■□□□ 1.236e-7■□□□□ 10.4
SEC24D-208ENST00000506622 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
SEC24D-208ENST00000506622 DAPK1P53355 1430 aa22.71■■□□□ 1.23
SEC24D-208ENST00000506622 VWDEQ8N2E2 1590 aa22.71■■□□□ 1.23
SEC24D-208ENST00000506622 FGD6Q6ZV73 1430 aa22.7■■□□□ 1.23
SEC24D-208ENST00000506622 PIP4K2BP78356 416 aa22.7■■□□□ 1.22
SEC24D-208ENST00000506622 PRDM15P57071 1507 aaPredicted RBP22.69■■□□□ 1.22
SEC24D-208ENST00000506622 ARHGAP31Q2M1Z3 1444 aa22.69■■□□□ 1.22
SEC24D-208ENST00000506622 KANK1Q14678 1352 aa22.68■■□□□ 1.22
SEC24D-208ENST00000506622 CHIC2Q9UKJ5 165 aa22.68■■□□□ 1.22
SEC24D-208ENST00000506622 UBR1Q8IWV7 1749 aa22.67■■□□□ 1.22
SEC24D-208ENST00000506622 ANKRD30AQ9BXX3 1397 aa22.67■■□□□ 1.22
SEC24D-208ENST00000506622 SOCS7O14512 581 aa22.65■■□□□ 1.22
SEC24D-208ENST00000506622 HSPA1LP34931 641 aa22.63■■□□□ 1.21
SEC24D-208ENST00000506622 TXNDC2Q86VQ3 553 aa22.63■■□□□ 1.21
SEC24D-208ENST00000506622 SCAF11Q99590 1463 aaKnown RBP22.62■■□□□ 1.21
SEC24D-208ENST00000506622 STAG3Q9UJ98 1225 aa22.61■■□□□ 1.21
SEC24D-208ENST00000506622 EID1Q9Y6B2 187 aa22.61■■□□□ 1.21
SEC24D-208ENST00000506622 LTKP29376 864 aa22.59■■□□□ 1.21
SEC24D-208ENST00000506622 STRCP1A6NGW2 1772 aa22.59■■□□□ 1.21
SEC24D-208ENST00000506622 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.21
SEC24D-208ENST00000506622 SLIT1O75093 1534 aa22.58■■□□□ 1.21
SEC24D-208ENST00000506622 ARHGAP23Q9P227 1491 aa22.57■■□□□ 1.2
SEC24D-208ENST00000506622 LRRC7Q96NW7 1537 aa22.57■■□□□ 1.2
SEC24D-208ENST00000506622 PIK3C2BO00750 1634 aa22.56■■□□□ 1.2
SEC24D-208ENST00000506622 SYNMO15061 1565 aa22.55■■□□□ 1.2
SEC24D-208ENST00000506622 LMTK2Q8IWU2 1503 aa22.55■■□□□ 1.2
SEC24D-208ENST00000506622 TMEM2Q9UHN6 1383 aa22.54■■□□□ 1.2
SEC24D-208ENST00000506622 IDI1Q13907 227 aa22.54■■□□□ 1.2
SEC24D-208ENST00000506622 ADGRL2O95490 1459 aa22.52■■□□□ 1.2
SEC24D-208ENST00000506622 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
SEC24D-208ENST00000506622 ALKQ9UM73 1620 aa22.51■■□□□ 1.19
SEC24D-208ENST00000506622 EFCAB6Q5THR3 1501 aa22.5■■□□□ 1.19
SEC24D-208ENST00000506622 ANKRD50Q9ULJ7 1429 aa22.48■■□□□ 1.19
SEC24D-208ENST00000506622 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
SEC24D-208ENST00000506622 NOS1P29475 1434 aa22.47■■□□□ 1.19
SEC24D-208ENST00000506622 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
SEC24D-208ENST00000506622 MED1Q15648 1581 aaPredicted RBP22.46■■□□□ 1.19
SEC24D-208ENST00000506622 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
SEC24D-208ENST00000506622 BCANQ96GW7 911 aa22.42■■□□□ 1.18
SEC24D-208ENST00000506622 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
SEC24D-208ENST00000506622 XIRP1Q702N8 1843 aaKnown RBP22.42■■□□□ 1.18
SEC24D-208ENST00000506622 ADGRB3O60242 1522 aa22.41■■□□□ 1.18
SEC24D-208ENST00000506622 KCNA6P17658 529 aa22.41■■□□□ 1.18
SEC24D-208ENST00000506622 PHF23Q9BUL5 403 aaPredicted RBP22.4■■□□□ 1.18
SEC24D-208ENST00000506622 TET3O43151 1660 aa22.38■■□□□ 1.17
SEC24D-208ENST00000506622 HDGFP51858 240 aaKnown RBP22.37■■□□□ 1.17
SEC24D-208ENST00000506622 PROSER2Q86WR7 435 aaPredicted RBP22.37■■□□□ 1.17
SEC24D-208ENST00000506622 TMEM94Q12767 1356 aa22.37■■□□□ 1.17
SEC24D-208ENST00000506622 GCC2Q8IWJ2 1684 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms