RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 NISCHQ9Y2I1 1504 aa36.36■■■■□ 3.41
SEC24D-208ENST00000506622 ABCC9O60706 1549 aa32.66■■■□□ 2.82
SEC24D-208ENST00000506622 CCDC180Q9P1Z9 1646 aa32.63■■■□□ 2.81
SEC24D-208ENST00000506622 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
SEC24D-208ENST00000506622 NACADO15069 1562 aa30.87■■■□□ 2.53
SEC24D-208ENST00000506622 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
SEC24D-208ENST00000506622 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
SEC24D-208ENST00000506622 PABPN1Q86U42 306 aaKnown RBP eCLIP30.43■■■□□ 2.46
SEC24D-208ENST00000506622 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
SEC24D-208ENST00000506622 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
SEC24D-208ENST00000506622 BICRAQ9NZM4 1560 aa30.13■■■□□ 2.41
SEC24D-208ENST00000506622 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
SEC24D-208ENST00000506622 DCAF1Q9Y4B6 1507 aa30.03■■■□□ 2.4
SEC24D-208ENST00000506622 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
SEC24D-208ENST00000506622 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
SEC24D-208ENST00000506622 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
SEC24D-208ENST00000506622 EIF4G1Q04637 1599 aaKnown RBP29.42■■■□□ 2.3
SEC24D-208ENST00000506622 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
SEC24D-208ENST00000506622 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
SEC24D-208ENST00000506622 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
SEC24D-208ENST00000506622 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
SEC24D-208ENST00000506622 SMARCA2P51531 1590 aa28.34■■■□□ 2.13
SEC24D-208ENST00000506622 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
SEC24D-208ENST00000506622 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
SEC24D-208ENST00000506622 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
SEC24D-208ENST00000506622 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
SEC24D-208ENST00000506622 CUX2O14529 1486 aa28.15■■■□□ 2.1
SEC24D-208ENST00000506622 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
SEC24D-208ENST00000506622 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
SEC24D-208ENST00000506622 NESP48681 1621 aa28.03■■■□□ 2.08
SEC24D-208ENST00000506622 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
SEC24D-208ENST00000506622 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
SEC24D-208ENST00000506622 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
SEC24D-208ENST00000506622 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
SEC24D-208ENST00000506622 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
SEC24D-208ENST00000506622 WIZO95785 1651 aa27.68■■■□□ 2.02
SEC24D-208ENST00000506622 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
SEC24D-208ENST00000506622 MRC2Q9UBG0 1479 aa27.45■■□□□ 1.98
SEC24D-208ENST00000506622 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
SEC24D-208ENST00000506622 WDR62O43379 1518 aa27.37■■□□□ 1.97
SEC24D-208ENST00000506622 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
SEC24D-208ENST00000506622 TOP2AP11388 1531 aaKnown RBP27.33■■□□□ 1.97
SEC24D-208ENST00000506622 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
SEC24D-208ENST00000506622 CFTRP13569 1480 aa27.31■■□□□ 1.96
SEC24D-208ENST00000506622 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
SEC24D-208ENST00000506622 PRDM2Q13029 1718 aa27.05■■□□□ 1.92
SEC24D-208ENST00000506622 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
SEC24D-208ENST00000506622 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
SEC24D-208ENST00000506622 OSCARQ8IYS5 282 aa26.92■■□□□ 1.9
SEC24D-208ENST00000506622 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
SEC24D-208ENST00000506622 TOPBP1Q92547 1522 aa26.79■■□□□ 1.88
SEC24D-208ENST00000506622 ABCC8Q09428 1581 aa26.78■■□□□ 1.88
SEC24D-208ENST00000506622 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
SEC24D-208ENST00000506622 DNMBPQ6XZF7 1577 aa26.7■■□□□ 1.86
SEC24D-208ENST00000506622 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
SEC24D-208ENST00000506622 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
SEC24D-208ENST00000506622 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.842e-6■■■■■ 45.2
SEC24D-208ENST00000506622 POLA1P09884 1462 aaPredicted RBP26.52■■□□□ 1.84
SEC24D-208ENST00000506622 RIMBP3CA6NJZ7 1639 aa26.51■■□□□ 1.83
SEC24D-208ENST00000506622 RIMBP3BA6NNM3 1639 aa26.51■■□□□ 1.83
SEC24D-208ENST00000506622 RIMBP3Q9UFD9 1639 aa26.51■■□□□ 1.83
SEC24D-208ENST00000506622 SOGA1O94964 1423 aa26.43■■□□□ 1.82
SEC24D-208ENST00000506622 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
SEC24D-208ENST00000506622 FBLN2P98095 1184 aa26.42■■□□□ 1.82
SEC24D-208ENST00000506622 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
SEC24D-208ENST00000506622 CHD1O14646 1710 aa26.42■■□□□ 1.82
SEC24D-208ENST00000506622 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
SEC24D-208ENST00000506622 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
SEC24D-208ENST00000506622 CUX1P39880 1505 aa26.31■■□□□ 1.8
SEC24D-208ENST00000506622 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
SEC24D-208ENST00000506622 CYB5RLQ6IPT4 315 aa26.3■■□□□ 1.8
SEC24D-208ENST00000506622 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
SEC24D-208ENST00000506622 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
SEC24D-208ENST00000506622 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
SEC24D-208ENST00000506622 GRIN2BQ13224 1484 aa26.19■■□□□ 1.78
SEC24D-208ENST00000506622 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
SEC24D-208ENST00000506622 ARAP1Q96P48 1450 aa26.14■■□□□ 1.78
SEC24D-208ENST00000506622 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
SEC24D-208ENST00000506622 SYNJ2O15056 1496 aa26.1■■□□□ 1.77
SEC24D-208ENST00000506622 GAPVD1Q14C86 1478 aa26.1■■□□□ 1.77
SEC24D-208ENST00000506622 CLASP1Q7Z460 1538 aa26.08■■□□□ 1.77
SEC24D-208ENST00000506622 PBRM1Q86U86 1689 aa26.07■■□□□ 1.76
SEC24D-208ENST00000506622 ABCA10Q8WWZ4 1543 aa26.05■■□□□ 1.76
SEC24D-208ENST00000506622 TRHP20396 242 aaPredicted RBP26.04■■□□□ 1.76
SEC24D-208ENST00000506622 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
SEC24D-208ENST00000506622 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
SEC24D-208ENST00000506622 TOP2BQ02880 1626 aa25.9■■□□□ 1.74
SEC24D-208ENST00000506622 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
SEC24D-208ENST00000506622 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
SEC24D-208ENST00000506622 ADAMTS12P58397 1594 aa25.8■■□□□ 1.72
SEC24D-208ENST00000506622 FHAD1B1AJZ9 1412 aa25.77■■□□□ 1.72
SEC24D-208ENST00000506622 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
SEC24D-208ENST00000506622 NUP160Q12769 1436 aa25.73■■□□□ 1.71
SEC24D-208ENST00000506622 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
SEC24D-208ENST00000506622 ERCC6L2Q5T890 1561 aa25.68■■□□□ 1.7
SEC24D-208ENST00000506622 SHROOM2Q13796 1616 aa25.62■■□□□ 1.69
SEC24D-208ENST00000506622 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
SEC24D-208ENST00000506622 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
SEC24D-208ENST00000506622 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
SEC24D-208ENST00000506622 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms