RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 APLP2Q06481 763 aa35.61■■■■□ 3.29
CDC42SE2-207ENST00000504701 CERKQ8TCT0 537 aa35.61■■■■□ 3.29
CDC42SE2-207ENST00000504701 FBXO31Q5XUX0 539 aaPredicted RBP35.58■■■■□ 3.29
CDC42SE2-207ENST00000504701 CROCC2H7BZ55 1655 aa35.58■■■■□ 3.29
CDC42SE2-207ENST00000504701 PTPRTO14522 1441 aa35.57■■■■□ 3.29
CDC42SE2-207ENST00000504701 DMRT2Q9Y5R5 561 aa35.57■■■■□ 3.28
CDC42SE2-207ENST00000504701 RNF17Q9BXT8 1623 aaKnown RBP35.56■■■■□ 3.28
CDC42SE2-207ENST00000504701 NCKAP5LQ9HCH0 1330 aa35.54■■■■□ 3.28
CDC42SE2-207ENST00000504701 ABCC5O15440 1437 aa35.53■■■■□ 3.28
CDC42SE2-207ENST00000504701 WASHC2CQ9Y4E1 1318 aa35.53■■■■□ 3.28
CDC42SE2-207ENST00000504701 MROH1Q8NDA8 1641 aa35.52■■■■□ 3.28
CDC42SE2-207ENST00000504701 PZPP20742 1482 aa35.52■■■■□ 3.28
CDC42SE2-207ENST00000504701 FAM135AQ9P2D6 1515 aa35.52■■■■□ 3.28
CDC42SE2-207ENST00000504701 FGD6Q6ZV73 1430 aa35.51■■■■□ 3.28
CDC42SE2-207ENST00000504701 EIF2AK4Q9P2K8 1649 aaKnown RBP35.5■■■■□ 3.27
CDC42SE2-207ENST00000504701 DNMT1P26358 1616 aaKnown RBP35.49■■■■□ 3.27
CDC42SE2-207ENST00000504701 TNRQ92752 1358 aa35.47■■■■□ 3.27
CDC42SE2-207ENST00000504701 A2ML1A8K2U0 1454 aa35.47■■■■□ 3.27
CDC42SE2-207ENST00000504701 TCOF1Q13428 1488 aaKnown RBP35.47■■■■□ 3.27
CDC42SE2-207ENST00000504701 ABCC3O15438 1527 aa35.47■■■■□ 3.27
CDC42SE2-207ENST00000504701 CEP152O94986 1710 aa35.46■■■■□ 3.27
CDC42SE2-207ENST00000504701 DAPK1P53355 1430 aa35.45■■■■□ 3.27
CDC42SE2-207ENST00000504701 DUOX2Q9NRD8 1548 aa35.45■■■■□ 3.27
CDC42SE2-207ENST00000504701 LTBP4Q8N2S1 1624 aa35.44■■■■□ 3.26
CDC42SE2-207ENST00000504701 PLA2R1Q13018 1463 aa35.44■■■■□ 3.26
CDC42SE2-207ENST00000504701 SHANK2Q9UPX8 1470 aa35.44■■■■□ 3.26
CDC42SE2-207ENST00000504701 KIF15Q9NS87 1388 aa35.41■■■■□ 3.26
CDC42SE2-207ENST00000504701 ZC3H13Q5T200 1668 aaKnown RBP35.41■■■■□ 3.26
CDC42SE2-207ENST00000504701 RRP7BPQ9NSQ0 103 aa35.4■■■■□ 3.26
CDC42SE2-207ENST00000504701 CHIC2Q9UKJ5 165 aa35.35■■■■□ 3.25
CDC42SE2-207ENST00000504701 CFAP65Q6ZU64 1925 aaKnown RBP35.34■■■■□ 3.25
CDC42SE2-207ENST00000504701 PKD2Q13563 968 aa35.32■■■■□ 3.24
CDC42SE2-207ENST00000504701 ZNF335Q9H4Z2 1342 aaPredicted RBP35.32■■■■□ 3.24
CDC42SE2-207ENST00000504701 POLR1AO95602 1720 aaPredicted RBP35.31■■■■□ 3.24
CDC42SE2-207ENST00000504701 SPATA31D1Q6ZQQ2 1576 aa35.3■■■■□ 3.24
CDC42SE2-207ENST00000504701 NEURL4Q96JN8 1562 aa35.3■■■■□ 3.24
CDC42SE2-207ENST00000504701 PRDM15P57071 1507 aaPredicted RBP35.3■■■■□ 3.24
CDC42SE2-207ENST00000504701 ERBINQ96RT1 1412 aa35.3■■■■□ 3.24
CDC42SE2-207ENST00000504701 ERVK-7P63135 1459 aa35.29■■■■□ 3.24
CDC42SE2-207ENST00000504701 NLRP1Q9C000 1473 aa35.27■■■■□ 3.24
CDC42SE2-207ENST00000504701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.26■■■■□ 3.24
CDC42SE2-207ENST00000504701 DEPDC5O75140 1603 aa35.26■■■■□ 3.24
CDC42SE2-207ENST00000504701 UGGT1Q9NYU2 1555 aa35.25■■■■□ 3.23
CDC42SE2-207ENST00000504701 FAM50AQ14320 339 aaKnown RBP35.24■■■■□ 3.23
CDC42SE2-207ENST00000504701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.23■■■■□ 3.231e-6■■■■□ 21
CDC42SE2-207ENST00000504701 ANKRD30AQ9BXX3 1397 aa35.21■■■■□ 3.23
CDC42SE2-207ENST00000504701 ADGRL2O95490 1459 aa35.16■■■■□ 3.22
CDC42SE2-207ENST00000504701 PPARGC1BQ86YN6 1023 aaKnown RBP35.14■■■■□ 3.22
CDC42SE2-207ENST00000504701 THEMISQ8N1K5 641 aaPredicted RBP35.14■■■■□ 3.22
CDC42SE2-207ENST00000504701 UBR1Q8IWV7 1749 aa35.13■■■■□ 3.21
CDC42SE2-207ENST00000504701 VWDEQ8N2E2 1590 aa35.12■■■■□ 3.21
CDC42SE2-207ENST00000504701 IQSEC2Q5JU85 1478 aa35.11■■■■□ 3.21
CDC42SE2-207ENST00000504701 ARHGAP31Q2M1Z3 1444 aa35.11■■■■□ 3.21
CDC42SE2-207ENST00000504701 ANKLE2Q86XL3 938 aa35.1■■■■□ 3.21
CDC42SE2-207ENST00000504701 NPHP4O75161 1426 aaPredicted RBP35.06■■■■□ 3.2
CDC42SE2-207ENST00000504701 KANK1Q14678 1352 aa35.05■■■■□ 3.2
CDC42SE2-207ENST00000504701 LMTK2Q8IWU2 1503 aa35.05■■■■□ 3.2
CDC42SE2-207ENST00000504701 IQGAP1P46940 1657 aa35.05■■■■□ 3.2
CDC42SE2-207ENST00000504701 MED14O60244 1454 aa35.04■■■■□ 3.2
CDC42SE2-207ENST00000504701 PIK3C2BO00750 1634 aa35.03■■■■□ 3.2
CDC42SE2-207ENST00000504701 ANKRD50Q9ULJ7 1429 aa35■■■■□ 3.19
CDC42SE2-207ENST00000504701 EFCAB6Q5THR3 1501 aa34.99■■■■□ 3.19
CDC42SE2-207ENST00000504701 SYNMO15061 1565 aa34.99■■■■□ 3.19
CDC42SE2-207ENST00000504701 STRCP1A6NGW2 1772 aa34.96■■■■□ 3.19
CDC42SE2-207ENST00000504701 ARHGAP23Q9P227 1491 aa34.93■■■■□ 3.18
CDC42SE2-207ENST00000504701 UBAP1LF5GYI3 381 aa34.93■■■■□ 3.18
CDC42SE2-207ENST00000504701 LTKP29376 864 aa34.93■■■■□ 3.18
CDC42SE2-207ENST00000504701 SLIT1O75093 1534 aa34.91■■■■□ 3.18
CDC42SE2-207ENST00000504701 CPS1P31327 1500 aa34.91■■■■□ 3.18
CDC42SE2-207ENST00000504701 SCAF11Q99590 1463 aaKnown RBP34.9■■■■□ 3.18
CDC42SE2-207ENST00000504701 ITGAEP38570 1179 aa34.89■■■■□ 3.18
CDC42SE2-207ENST00000504701 NOS1P29475 1434 aa34.89■■■■□ 3.18
CDC42SE2-207ENST00000504701 IDI1Q13907 227 aa34.88■■■■□ 3.17
CDC42SE2-207ENST00000504701 UNC13BO14795 1591 aa34.87■■■■□ 3.17
CDC42SE2-207ENST00000504701 TET3O43151 1660 aa34.85■■■■□ 3.17
CDC42SE2-207ENST00000504701 TXNDC2Q86VQ3 553 aa34.84■■■■□ 3.17
CDC42SE2-207ENST00000504701 ROCK1Q13464 1354 aa34.82■■■■□ 3.16
CDC42SE2-207ENST00000504701 TMEM2Q9UHN6 1383 aa34.81■■■■□ 3.16
CDC42SE2-207ENST00000504701 KDM5AP29375 1690 aaKnown RBP34.81■■■■□ 3.16
CDC42SE2-207ENST00000504701 GCC2Q8IWJ2 1684 aa34.8■■■■□ 3.16
CDC42SE2-207ENST00000504701 STAG3Q9UJ98 1225 aa34.8■■■■□ 3.16
CDC42SE2-207ENST00000504701 ADGRB3O60242 1522 aa34.79■■■■□ 3.16
CDC42SE2-207ENST00000504701 MYO5BQ9ULV0 1848 aa34.77■■■■□ 3.16
CDC42SE2-207ENST00000504701 ALKQ9UM73 1620 aa34.77■■■■□ 3.16
CDC42SE2-207ENST00000504701 E9PCH4 1651 aa34.76■■■■□ 3.16
CDC42SE2-207ENST00000504701 RPRD2Q5VT52 1461 aaKnown RBP34.75■■■■□ 3.15
CDC42SE2-207ENST00000504701 LRRC7Q96NW7 1537 aa34.75■■■■□ 3.15
CDC42SE2-207ENST00000504701 IQGAP3Q86VI3 1631 aa34.73■■■■□ 3.15
CDC42SE2-207ENST00000504701 EID1Q9Y6B2 187 aa34.73■■■■□ 3.15
CDC42SE2-207ENST00000504701 PIP4K2BP78356 416 aa34.72■■■■□ 3.15
CDC42SE2-207ENST00000504701 SCAF1Q9H7N4 1312 aaKnown RBP34.71■■■■□ 3.15
CDC42SE2-207ENST00000504701 SENP3Q9H4L4 574 aaPredicted RBP34.67■■■■□ 3.14
CDC42SE2-207ENST00000504701 XIRP1Q702N8 1843 aaKnown RBP34.67■■■■□ 3.14
CDC42SE2-207ENST00000504701 DISP3Q9P2K9 1392 aa34.66■■■■□ 3.14
CDC42SE2-207ENST00000504701 SLC52A1Q9NWF4 448 aa34.66■■■■□ 3.14
CDC42SE2-207ENST00000504701 RRBP1Q9P2E9 1410 aaKnown RBP34.65■■■■□ 3.14
CDC42SE2-207ENST00000504701 TMEM131LA2VDJ0 1609 aa34.65■■■■□ 3.14
CDC42SE2-207ENST00000504701 NUP155O75694 1391 aa34.63■■■■□ 3.13
CDC42SE2-207ENST00000504701 TOM1O60784 492 aa34.63■■■■□ 3.13
CDC42SE2-207ENST00000504701 SLC26A8Q96RN1 970 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms