RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 GGT6Q6P531 493 aa21.4■■□□□ 1.02
HOXC6-203ENST00000504315 MYO3AQ8NEV4 1616 aa21.4■■□□□ 1.02
HOXC6-203ENST00000504315 ABCC5O15440 1437 aa21.38■■□□□ 1.01
HOXC6-203ENST00000504315 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
HOXC6-203ENST00000504315 ZC3H13Q5T200 1668 aaKnown RBP21.38■■□□□ 1.01
HOXC6-203ENST00000504315 KIF3BO15066 747 aa21.37■■□□□ 1.01
HOXC6-203ENST00000504315 DUOX2Q9NRD8 1548 aa21.37■■□□□ 1.01
HOXC6-203ENST00000504315 DAPK1P53355 1430 aa21.36■■□□□ 1.01
HOXC6-203ENST00000504315 MROH1Q8NDA8 1641 aa21.36■■□□□ 1.01
HOXC6-203ENST00000504315 PZPP20742 1482 aa21.32■■□□□ 1
HOXC6-203ENST00000504315 CEP170BQ9Y4F5 1589 aaPredicted RBP21.32■■□□□ 1
HOXC6-203ENST00000504315 CEP152O94986 1710 aa21.31■■□□□ 1
HOXC6-203ENST00000504315 ABCC3O15438 1527 aa21.3■■□□□ 1
HOXC6-203ENST00000504315 DEPDC5O75140 1603 aa21.3■■□□□ 1
HOXC6-203ENST00000504315 ERBINQ96RT1 1412 aa21.29■■□□□ 1
HOXC6-203ENST00000504315 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
HOXC6-203ENST00000504315 KIF15Q9NS87 1388 aa21.29■■□□□ 1
HOXC6-203ENST00000504315 NCOA1Q15788 1441 aa21.29■■□□□ 1
HOXC6-203ENST00000504315 CFAP65Q6ZU64 1925 aaKnown RBP21.28■■□□□ 1
HOXC6-203ENST00000504315 CAMSAP1Q5T5Y3 1602 aa21.28■■□□□ 1
HOXC6-203ENST00000504315 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
HOXC6-203ENST00000504315 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
HOXC6-203ENST00000504315 A2ML1A8K2U0 1454 aa21.25■□□□□ 0.99
HOXC6-203ENST00000504315 PLA2R1Q13018 1463 aa21.25■□□□□ 0.99
HOXC6-203ENST00000504315 PTPRTO14522 1441 aa21.24■□□□□ 0.99
HOXC6-203ENST00000504315 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
HOXC6-203ENST00000504315 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
HOXC6-203ENST00000504315 SPATA31D1Q6ZQQ2 1576 aa21.23■□□□□ 0.99
HOXC6-203ENST00000504315 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
HOXC6-203ENST00000504315 TNRQ92752 1358 aa21.21■□□□□ 0.99
HOXC6-203ENST00000504315 POLR1AO95602 1720 aaPredicted RBP21.21■□□□□ 0.99
HOXC6-203ENST00000504315 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
HOXC6-203ENST00000504315 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
HOXC6-203ENST00000504315 FBXO31Q5XUX0 539 aaPredicted RBP21.18■□□□□ 0.98
HOXC6-203ENST00000504315 NLRP1Q9C000 1473 aa21.18■□□□□ 0.98
HOXC6-203ENST00000504315 ERVK-7P63135 1459 aa21.17■□□□□ 0.98
HOXC6-203ENST00000504315 ARHGAP31Q2M1Z3 1444 aa21.16■□□□□ 0.98
HOXC6-203ENST00000504315 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
HOXC6-203ENST00000504315 FAM50AQ14320 339 aaKnown RBP21.14■□□□□ 0.97
HOXC6-203ENST00000504315 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.97
HOXC6-203ENST00000504315 PKD2Q13563 968 aa21.13■□□□□ 0.97
HOXC6-203ENST00000504315 FBXO41Q8TF61 875 aa21.13■□□□□ 0.97
HOXC6-203ENST00000504315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.12■□□□□ 0.972e-6■□□□□ 11.3
HOXC6-203ENST00000504315 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
HOXC6-203ENST00000504315 UGGT1Q9NYU2 1555 aa21.11■□□□□ 0.97
HOXC6-203ENST00000504315 UBR1Q8IWV7 1749 aa21.11■□□□□ 0.97
HOXC6-203ENST00000504315 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
HOXC6-203ENST00000504315 ANKRD50Q9ULJ7 1429 aa21.09■□□□□ 0.97
HOXC6-203ENST00000504315 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
HOXC6-203ENST00000504315 UNC13BO14795 1591 aa21.08■□□□□ 0.97
HOXC6-203ENST00000504315 CERKQ8TCT0 537 aa21.08■□□□□ 0.97
HOXC6-203ENST00000504315 EFCAB6Q5THR3 1501 aa21.08■□□□□ 0.96
HOXC6-203ENST00000504315 KANK1Q14678 1352 aa21.08■□□□□ 0.96
HOXC6-203ENST00000504315 NCKAP5LQ9HCH0 1330 aa21.07■□□□□ 0.96
HOXC6-203ENST00000504315 KDM5AP29375 1690 aaKnown RBP21.06■□□□□ 0.96
HOXC6-203ENST00000504315 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
HOXC6-203ENST00000504315 TET3O43151 1660 aa21.05■□□□□ 0.96
HOXC6-203ENST00000504315 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
HOXC6-203ENST00000504315 MED14O60244 1454 aa21.02■□□□□ 0.96
HOXC6-203ENST00000504315 IQSEC2Q5JU85 1478 aa21.02■□□□□ 0.96
HOXC6-203ENST00000504315 THEMISQ8N1K5 641 aaPredicted RBP21.02■□□□□ 0.96
HOXC6-203ENST00000504315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.96
HOXC6-203ENST00000504315 PIK3C2BO00750 1634 aa21.02■□□□□ 0.96
HOXC6-203ENST00000504315 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
HOXC6-203ENST00000504315 SYNMO15061 1565 aa21.01■□□□□ 0.95
HOXC6-203ENST00000504315 PPARGC1BQ86YN6 1023 aaKnown RBP21■□□□□ 0.95
HOXC6-203ENST00000504315 RPRD2Q5VT52 1461 aaKnown RBP21■□□□□ 0.95
HOXC6-203ENST00000504315 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
HOXC6-203ENST00000504315 NOS1P29475 1434 aa20.99■□□□□ 0.95
HOXC6-203ENST00000504315 ARHGAP23Q9P227 1491 aa20.98■□□□□ 0.95
HOXC6-203ENST00000504315 SLIT1O75093 1534 aa20.98■□□□□ 0.95
HOXC6-203ENST00000504315 ANKLE2Q86XL3 938 aa20.96■□□□□ 0.95
HOXC6-203ENST00000504315 E9PCH4 1651 aa20.96■□□□□ 0.95
HOXC6-203ENST00000504315 MYO5BQ9ULV0 1848 aa20.94■□□□□ 0.94
HOXC6-203ENST00000504315 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
HOXC6-203ENST00000504315 NPHP4O75161 1426 aaPredicted RBP20.94■□□□□ 0.94
HOXC6-203ENST00000504315 ADGRB3O60242 1522 aa20.91■□□□□ 0.94
HOXC6-203ENST00000504315 SCAF11Q99590 1463 aaKnown RBP20.91■□□□□ 0.94
HOXC6-203ENST00000504315 STRCP1A6NGW2 1772 aa20.9■□□□□ 0.94
HOXC6-203ENST00000504315 CPS1P31327 1500 aa20.89■□□□□ 0.94
HOXC6-203ENST00000504315 ITGAEP38570 1179 aa20.87■□□□□ 0.93
HOXC6-203ENST00000504315 IDI1Q13907 227 aa20.87■□□□□ 0.93
HOXC6-203ENST00000504315 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
HOXC6-203ENST00000504315 SLC52A1Q9NWF4 448 aa20.85■□□□□ 0.93
HOXC6-203ENST00000504315 TMEM131LA2VDJ0 1609 aa20.85■□□□□ 0.93
HOXC6-203ENST00000504315 SPHKAPQ2M3C7 1700 aa20.84■□□□□ 0.93
HOXC6-203ENST00000504315 LTKP29376 864 aa20.83■□□□□ 0.93
HOXC6-203ENST00000504315 NAIPQ13075 1403 aa20.83■□□□□ 0.93
HOXC6-203ENST00000504315 NUP155O75694 1391 aa20.82■□□□□ 0.92
HOXC6-203ENST00000504315 HFM1A2PYH4 1435 aa20.79■□□□□ 0.92
HOXC6-203ENST00000504315 TXNDC2Q86VQ3 553 aa20.79■□□□□ 0.92
HOXC6-203ENST00000504315 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
HOXC6-203ENST00000504315 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
HOXC6-203ENST00000504315 XIRP1Q702N8 1843 aaKnown RBP20.78■□□□□ 0.92
HOXC6-203ENST00000504315 ZFYVE9O95405 1425 aa20.77■□□□□ 0.91
HOXC6-203ENST00000504315 LRRC7Q96NW7 1537 aa20.73■□□□□ 0.91
HOXC6-203ENST00000504315 ALKQ9UM73 1620 aa20.71■□□□□ 0.91
HOXC6-203ENST00000504315 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
HOXC6-203ENST00000504315 NWD1Q149M9 1564 aa20.7■□□□□ 0.9
HOXC6-203ENST00000504315 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms