RNA–Protein interactions for RNA: ENST00000503079.6

SMN1-203, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5 BASIC

Gene SMN1, Length 1,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-203ENST00000503079 DNMT1P26358 1616 aaKnown RBP27.78■■■□□ 2.04
SMN1-203ENST00000503079 KIF3BO15066 747 aa27.78■■■□□ 2.04
SMN1-203ENST00000503079 CEP152O94986 1710 aa27.78■■■□□ 2.04
SMN1-203ENST00000503079 EIF2AK4Q9P2K8 1649 aaKnown RBP27.78■■■□□ 2.04
SMN1-203ENST00000503079 CERKQ8TCT0 537 aa27.76■■■□□ 2.03
SMN1-203ENST00000503079 FAM135AQ9P2D6 1515 aa27.76■■■□□ 2.03
SMN1-203ENST00000503079 RSPH4AQ5TD94 716 aa27.75■■■□□ 2.03
SMN1-203ENST00000503079 PZPP20742 1482 aa27.75■■■□□ 2.03
SMN1-203ENST00000503079 FBXO31Q5XUX0 539 aaPredicted RBP27.74■■■□□ 2.03
SMN1-203ENST00000503079 TCOF1Q13428 1488 aaKnown RBP27.74■■■□□ 2.03
SMN1-203ENST00000503079 ABCC5O15440 1437 aa27.74■■■□□ 2.03
SMN1-203ENST00000503079 ABCC3O15438 1527 aa27.73■■■□□ 2.03
SMN1-203ENST00000503079 PPP6R1Q9UPN7 881 aa27.72■■■□□ 2.03
SMN1-203ENST00000503079 ZC3H13Q5T200 1668 aaKnown RBP27.71■■■□□ 2.03
SMN1-203ENST00000503079 PLA2R1Q13018 1463 aa27.7■■■□□ 2.03
SMN1-203ENST00000503079 A2ML1A8K2U0 1454 aa27.7■■■□□ 2.02
SMN1-203ENST00000503079 NCKAP5LQ9HCH0 1330 aa27.69■■■□□ 2.02
SMN1-203ENST00000503079 NEURL4Q96JN8 1562 aa27.69■■■□□ 2.02
SMN1-203ENST00000503079 FGD6Q6ZV73 1430 aa27.69■■■□□ 2.02
SMN1-203ENST00000503079 POLR1AO95602 1720 aaPredicted RBP27.69■■■□□ 2.02
SMN1-203ENST00000503079 SHANK2Q9UPX8 1470 aa27.68■■■□□ 2.02
SMN1-203ENST00000503079 CFAP65Q6ZU64 1925 aaKnown RBP27.67■■■□□ 2.02
SMN1-203ENST00000503079 TSPY4P0CV99 314 aa27.66■■■□□ 2.02
SMN1-203ENST00000503079 TSPY10P0CW01 314 aa27.66■■■□□ 2.02
SMN1-203ENST00000503079 DUOX2Q9NRD8 1548 aa27.66■■■□□ 2.02
SMN1-203ENST00000503079 DAPK1P53355 1430 aa27.66■■■□□ 2.02
SMN1-203ENST00000503079 DEPDC5O75140 1603 aa27.64■■■□□ 2.02
SMN1-203ENST00000503079 SPATA31D1Q6ZQQ2 1576 aa27.64■■■□□ 2.01
SMN1-203ENST00000503079 TNRQ92752 1358 aa27.63■■■□□ 2.01
SMN1-203ENST00000503079 PRDM15P57071 1507 aaPredicted RBP27.63■■■□□ 2.01
SMN1-203ENST00000503079 DMRT2Q9Y5R5 561 aa27.62■■■□□ 2.01
SMN1-203ENST00000503079 WASHC2CQ9Y4E1 1318 aa27.6■■■□□ 2.01
SMN1-203ENST00000503079 KIF15Q9NS87 1388 aa27.58■■■□□ 2.01
SMN1-203ENST00000503079 ERVK-7P63135 1459 aa27.57■■■□□ 2
SMN1-203ENST00000503079 ZNF335Q9H4Z2 1342 aaPredicted RBP27.56■■■□□ 2
SMN1-203ENST00000503079 UBR1Q8IWV7 1749 aa27.53■■■□□ 2
SMN1-203ENST00000503079 ERBINQ96RT1 1412 aa27.53■■■□□ 2
SMN1-203ENST00000503079 VWDEQ8N2E2 1590 aa27.52■■■□□ 2
SMN1-203ENST00000503079 UGGT1Q9NYU2 1555 aa27.52■■■□□ 2
SMN1-203ENST00000503079 NLRP1Q9C000 1473 aa27.51■■■□□ 2
SMN1-203ENST00000503079 RRP7BPQ9NSQ0 103 aa27.5■■□□□ 1.99
SMN1-203ENST00000503079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.49■■□□□ 1.99
SMN1-203ENST00000503079 STRCP1A6NGW2 1772 aa27.48■■□□□ 1.99
SMN1-203ENST00000503079 APLP2Q06481 763 aa27.48■■□□□ 1.99
SMN1-203ENST00000503079 PKD2Q13563 968 aa27.48■■□□□ 1.99
SMN1-203ENST00000503079 ADGRL2O95490 1459 aa27.48■■□□□ 1.99
SMN1-203ENST00000503079 IQSEC2Q5JU85 1478 aa27.46■■□□□ 1.99
SMN1-203ENST00000503079 CHIC2Q9UKJ5 165 aa27.45■■□□□ 1.98
SMN1-203ENST00000503079 IQGAP1P46940 1657 aa27.43■■□□□ 1.98
SMN1-203ENST00000503079 ARHGAP31Q2M1Z3 1444 aa27.42■■□□□ 1.98
SMN1-203ENST00000503079 MED14O60244 1454 aa27.42■■□□□ 1.98
SMN1-203ENST00000503079 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
SMN1-203ENST00000503079 PIK3C2BO00750 1634 aa27.41■■□□□ 1.98
SMN1-203ENST00000503079 SYNMO15061 1565 aa27.41■■□□□ 1.98
SMN1-203ENST00000503079 EFCAB6Q5THR3 1501 aa27.36■■□□□ 1.97
SMN1-203ENST00000503079 ANKRD30AQ9BXX3 1397 aa27.36■■□□□ 1.97
SMN1-203ENST00000503079 ALKQ9UM73 1620 aa27.36■■□□□ 1.97
SMN1-203ENST00000503079 NPHP4O75161 1426 aaPredicted RBP27.34■■□□□ 1.97
SMN1-203ENST00000503079 ARHGAP23Q9P227 1491 aa27.34■■□□□ 1.97
SMN1-203ENST00000503079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.33■■□□□ 1.97
SMN1-203ENST00000503079 SLIT1O75093 1534 aa27.31■■□□□ 1.96
SMN1-203ENST00000503079 MYO5BQ9ULV0 1848 aa27.3■■□□□ 1.96
SMN1-203ENST00000503079 FAM50AQ14320 339 aaKnown RBP27.3■■□□□ 1.96
SMN1-203ENST00000503079 THEMISQ8N1K5 641 aaPredicted RBP27.3■■□□□ 1.96
SMN1-203ENST00000503079 UNC13BO14795 1591 aa27.3■■□□□ 1.96
SMN1-203ENST00000503079 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
SMN1-203ENST00000503079 NOS1P29475 1434 aa27.27■■□□□ 1.96
SMN1-203ENST00000503079 ANKLE2Q86XL3 938 aa27.27■■□□□ 1.96
SMN1-203ENST00000503079 PPARGC1BQ86YN6 1023 aaKnown RBP27.27■■□□□ 1.96
SMN1-203ENST00000503079 XIRP1Q702N8 1843 aaKnown RBP27.27■■□□□ 1.96
SMN1-203ENST00000503079 CPS1P31327 1500 aa27.26■■□□□ 1.96
SMN1-203ENST00000503079 ANKRD50Q9ULJ7 1429 aa27.25■■□□□ 1.95
SMN1-203ENST00000503079 TET3O43151 1660 aa27.25■■□□□ 1.95
SMN1-203ENST00000503079 LTKP29376 864 aa27.25■■□□□ 1.95
SMN1-203ENST00000503079 SCAF11Q99590 1463 aaKnown RBP27.24■■□□□ 1.95
SMN1-203ENST00000503079 GCC2Q8IWJ2 1684 aa27.24■■□□□ 1.95
SMN1-203ENST00000503079 E9PCH4 1651 aa27.22■■□□□ 1.95
SMN1-203ENST00000503079 KANK1Q14678 1352 aa27.2■■□□□ 1.94
SMN1-203ENST00000503079 ADGRB3O60242 1522 aa27.19■■□□□ 1.94
SMN1-203ENST00000503079 LRRC7Q96NW7 1537 aa27.17■■□□□ 1.94
SMN1-203ENST00000503079 IQGAP3Q86VI3 1631 aa27.17■■□□□ 1.94
SMN1-203ENST00000503079 IDI1Q13907 227 aa27.17■■□□□ 1.94
SMN1-203ENST00000503079 UBAP1LF5GYI3 381 aa27.16■■□□□ 1.94
SMN1-203ENST00000503079 TMEM2Q9UHN6 1383 aa27.15■■□□□ 1.94
SMN1-203ENST00000503079 ROCK1Q13464 1354 aa27.13■■□□□ 1.93
SMN1-203ENST00000503079 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
SMN1-203ENST00000503079 RPRD2Q5VT52 1461 aaKnown RBP27.11■■□□□ 1.93
SMN1-203ENST00000503079 TXNDC2Q86VQ3 553 aa27.08■■□□□ 1.93
SMN1-203ENST00000503079 ZFYVE9O95405 1425 aa27.06■■□□□ 1.92
SMN1-203ENST00000503079 ILDR2Q71H61 639 aa27.04■■□□□ 1.92
SMN1-203ENST00000503079 RRBP1Q9P2E9 1410 aaKnown RBP27.04■■□□□ 1.92
SMN1-203ENST00000503079 ITGAEP38570 1179 aa27.02■■□□□ 1.92
SMN1-203ENST00000503079 NWD1Q149M9 1564 aa27.01■■□□□ 1.91
SMN1-203ENST00000503079 DISP3Q9P2K9 1392 aa26.99■■□□□ 1.91
SMN1-203ENST00000503079 HSPA1LP34931 641 aa26.98■■□□□ 1.91
SMN1-203ENST00000503079 PIP4K2BP78356 416 aa26.98■■□□□ 1.91
SMN1-203ENST00000503079 SPHKAPQ2M3C7 1700 aa26.97■■□□□ 1.91
SMN1-203ENST00000503079 CHD2O14647 1828 aaKnown RBP26.97■■□□□ 1.91
SMN1-203ENST00000503079 SLC52A1Q9NWF4 448 aa26.94■■□□□ 1.9
SMN1-203ENST00000503079 SLC26A8Q96RN1 970 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms