RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
LSM3P4-201ENST00000502948 POLR1AO95602 1720 aaPredicted RBP9.79□□□□□ -0.84
LSM3P4-201ENST00000502948 EIF2AK4Q9P2K8 1649 aaKnown RBP9.79□□□□□ -0.84
LSM3P4-201ENST00000502948 ZNF644Q9H582 1327 aaPredicted RBP9.79□□□□□ -0.84
LSM3P4-201ENST00000502948 RNF17Q9BXT8 1623 aaKnown RBP9.78□□□□□ -0.84
LSM3P4-201ENST00000502948 GGT6Q6P531 493 aa9.78□□□□□ -0.84
LSM3P4-201ENST00000502948 LRRC9Q6ZRR7 1453 aa9.78□□□□□ -0.84
LSM3P4-201ENST00000502948 VPS8Q8N3P4 1428 aa9.77□□□□□ -0.85
LSM3P4-201ENST00000502948 MIA2Q96PC5 1412 aa9.77□□□□□ -0.85
LSM3P4-201ENST00000502948 NLRP1Q9C000 1473 aa9.77□□□□□ -0.85
LSM3P4-201ENST00000502948 DEPDC5O75140 1603 aa9.76□□□□□ -0.85
LSM3P4-201ENST00000502948 MED14O60244 1454 aa9.75□□□□□ -0.85
LSM3P4-201ENST00000502948 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
LSM3P4-201ENST00000502948 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
LSM3P4-201ENST00000502948 CPS1P31327 1500 aa9.75□□□□□ -0.85
LSM3P4-201ENST00000502948 NEURL4Q96JN8 1562 aa9.75□□□□□ -0.85
LSM3P4-201ENST00000502948 SPATA31D1Q6ZQQ2 1576 aa9.74□□□□□ -0.85
LSM3P4-201ENST00000502948 TNRQ92752 1358 aa9.74□□□□□ -0.85
LSM3P4-201ENST00000502948 KIF3BO15066 747 aa9.73□□□□□ -0.85
LSM3P4-201ENST00000502948 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
LSM3P4-201ENST00000502948 THEMISQ8N1K5 641 aaPredicted RBP9.72□□□□□ -0.85
LSM3P4-201ENST00000502948 WASHC2CQ9Y4E1 1318 aa9.72□□□□□ -0.85
LSM3P4-201ENST00000502948 MYOM3Q5VTT5 1437 aa9.72□□□□□ -0.85
LSM3P4-201ENST00000502948 SHANK2Q9UPX8 1470 aa9.72□□□□□ -0.85
LSM3P4-201ENST00000502948 ABCC3O15438 1527 aa9.72□□□□□ -0.85
LSM3P4-201ENST00000502948 UGGT1Q9NYU2 1555 aa9.71□□□□□ -0.85
LSM3P4-201ENST00000502948 MROH1Q8NDA8 1641 aa9.71□□□□□ -0.85
LSM3P4-201ENST00000502948 ZNF335Q9H4Z2 1342 aaPredicted RBP9.71□□□□□ -0.86
LSM3P4-201ENST00000502948 DUOX2Q9NRD8 1548 aa9.71□□□□□ -0.86
LSM3P4-201ENST00000502948 ARHGAP31Q2M1Z3 1444 aa9.7□□□□□ -0.86
LSM3P4-201ENST00000502948 CROCC2H7BZ55 1655 aa9.7□□□□□ -0.86
LSM3P4-201ENST00000502948 KDM5AP29375 1690 aaKnown RBP9.7□□□□□ -0.86
LSM3P4-201ENST00000502948 IQGAP1P46940 1657 aa9.69□□□□□ -0.86
LSM3P4-201ENST00000502948 PRDM15P57071 1507 aaPredicted RBP9.69□□□□□ -0.86
LSM3P4-201ENST00000502948 ANKLE2Q86XL3 938 aa9.69□□□□□ -0.86
LSM3P4-201ENST00000502948 VWDEQ8N2E2 1590 aa9.69□□□□□ -0.86
LSM3P4-201ENST00000502948 DISP3Q9P2K9 1392 aa9.69□□□□□ -0.86
LSM3P4-201ENST00000502948 UBR1Q8IWV7 1749 aa9.68□□□□□ -0.86
LSM3P4-201ENST00000502948 ERBINQ96RT1 1412 aa9.68□□□□□ -0.86
LSM3P4-201ENST00000502948 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
LSM3P4-201ENST00000502948 SYNMO15061 1565 aa9.67□□□□□ -0.86
LSM3P4-201ENST00000502948 ERVK-7P63135 1459 aa9.67□□□□□ -0.86
LSM3P4-201ENST00000502948 CEP152O94986 1710 aa9.67□□□□□ -0.86
LSM3P4-201ENST00000502948 SLIT1O75093 1534 aa9.66□□□□□ -0.86
LSM3P4-201ENST00000502948 NPHP4O75161 1426 aaPredicted RBP9.66□□□□□ -0.86
LSM3P4-201ENST00000502948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.66□□□□□ -0.86
LSM3P4-201ENST00000502948 UBAP1LF5GYI3 381 aa9.66□□□□□ -0.86
LSM3P4-201ENST00000502948 SOCS7O14512 581 aa9.66□□□□□ -0.86
LSM3P4-201ENST00000502948 ARHGAP23Q9P227 1491 aa9.66□□□□□ -0.86
LSM3P4-201ENST00000502948 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.86
LSM3P4-201ENST00000502948 TOM1O60784 492 aa9.65□□□□□ -0.86
LSM3P4-201ENST00000502948 KANK4Q5T7N3 995 aaPredicted RBP9.65□□□□□ -0.86
LSM3P4-201ENST00000502948 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.86
LSM3P4-201ENST00000502948 ABCC5O15440 1437 aa9.64□□□□□ -0.87
LSM3P4-201ENST00000502948 STRCP1A6NGW2 1772 aa9.63□□□□□ -0.87
LSM3P4-201ENST00000502948 ILDR2Q71H61 639 aa9.63□□□□□ -0.87
LSM3P4-201ENST00000502948 ALKQ9UM73 1620 aa9.63□□□□□ -0.87
LSM3P4-201ENST00000502948 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
LSM3P4-201ENST00000502948 SCAF11Q99590 1463 aaKnown RBP9.62□□□□□ -0.87
LSM3P4-201ENST00000502948 DAPK1P53355 1430 aa9.62□□□□□ -0.87
LSM3P4-201ENST00000502948 CFAP65Q6ZU64 1925 aaKnown RBP9.62□□□□□ -0.87
LSM3P4-201ENST00000502948 FGD6Q6ZV73 1430 aa9.61□□□□□ -0.87
LSM3P4-201ENST00000502948 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
LSM3P4-201ENST00000502948 ADGRL2O95490 1459 aa9.6□□□□□ -0.87
LSM3P4-201ENST00000502948 LOC105371045A0A1W2PR82 267 aa9.6□□□□□ -0.87
LSM3P4-201ENST00000502948 PIK3C2BO00750 1634 aa9.6□□□□□ -0.87
LSM3P4-201ENST00000502948 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
LSM3P4-201ENST00000502948 KANK1Q14678 1352 aa9.59□□□□□ -0.87
LSM3P4-201ENST00000502948 ANKRD30AQ9BXX3 1397 aa9.59□□□□□ -0.87
LSM3P4-201ENST00000502948 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.88
LSM3P4-201ENST00000502948 NOS1P29475 1434 aa9.58□□□□□ -0.88
LSM3P4-201ENST00000502948 EFCAB6Q5THR3 1501 aa9.58□□□□□ -0.88
LSM3P4-201ENST00000502948 APLP2Q06481 763 aa9.58□□□□□ -0.88
LSM3P4-201ENST00000502948 MED1Q15648 1581 aaPredicted RBP9.58□□□□□ -0.88
LSM3P4-201ENST00000502948 HSPA1LP34931 641 aa9.57□□□□□ -0.88
LSM3P4-201ENST00000502948 TMEM2Q9UHN6 1383 aa9.57□□□□□ -0.88
LSM3P4-201ENST00000502948 TET3O43151 1660 aa9.57□□□□□ -0.88
LSM3P4-201ENST00000502948 SLC52A1Q9NWF4 448 aa9.56□□□□□ -0.88
LSM3P4-201ENST00000502948 EID1Q9Y6B2 187 aa9.56□□□□□ -0.88
LSM3P4-201ENST00000502948 LTKP29376 864 aa9.55□□□□□ -0.88
LSM3P4-201ENST00000502948 TXNDC2Q86VQ3 553 aa9.55□□□□□ -0.88
LSM3P4-201ENST00000502948 RRP7BPQ9NSQ0 103 aa9.55□□□□□ -0.88
LSM3P4-201ENST00000502948 ADGRB3O60242 1522 aa9.55□□□□□ -0.88
LSM3P4-201ENST00000502948 GCC2Q8IWJ2 1684 aa9.55□□□□□ -0.88
LSM3P4-201ENST00000502948 NWD1Q149M9 1564 aa9.54□□□□□ -0.88
LSM3P4-201ENST00000502948 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
LSM3P4-201ENST00000502948 FAM135BQ49AJ0 1406 aa9.53□□□□□ -0.88
LSM3P4-201ENST00000502948 UNC13BO14795 1591 aa9.53□□□□□ -0.88
LSM3P4-201ENST00000502948 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
LSM3P4-201ENST00000502948 IDI1Q13907 227 aa9.52□□□□□ -0.89
LSM3P4-201ENST00000502948 ANKRD50Q9ULJ7 1429 aa9.52□□□□□ -0.89
LSM3P4-201ENST00000502948 CHD2O14647 1828 aaKnown RBP9.52□□□□□ -0.89
LSM3P4-201ENST00000502948 KCNA6P17658 529 aa9.51□□□□□ -0.89
LSM3P4-201ENST00000502948 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
LSM3P4-201ENST00000502948 ZFYVE9O95405 1425 aa9.5□□□□□ -0.89
LSM3P4-201ENST00000502948 NCOA3Q9Y6Q9 1424 aa9.5□□□□□ -0.89
LSM3P4-201ENST00000502948 TMEM131LA2VDJ0 1609 aa9.5□□□□□ -0.89
LSM3P4-201ENST00000502948 SCAF1Q9H7N4 1312 aaKnown RBP9.5□□□□□ -0.89
LSM3P4-201ENST00000502948 IQGAP3Q86VI3 1631 aa9.49□□□□□ -0.89
LSM3P4-201ENST00000502948 HDGFP51858 240 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms