RNA–Protein interactions for RNA: ENST00000498539.1

LRCH4-210, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 819 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-210ENST00000498539 FAM135AQ9P2D6 1515 aa25.07■■□□□ 1.6
LRCH4-210ENST00000498539 POLR1AO95602 1720 aaPredicted RBP25.07■■□□□ 1.6
LRCH4-210ENST00000498539 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
LRCH4-210ENST00000498539 ZNF335Q9H4Z2 1342 aaPredicted RBP25.07■■□□□ 1.6
LRCH4-210ENST00000498539 MAST1Q9Y2H9 1570 aa25.06■■□□□ 1.6
LRCH4-210ENST00000498539 RNF17Q9BXT8 1623 aaKnown RBP25.05■■□□□ 1.6
LRCH4-210ENST00000498539 IQSEC2Q5JU85 1478 aa25.05■■□□□ 1.6
LRCH4-210ENST00000498539 TNRQ92752 1358 aa25.05■■□□□ 1.6
LRCH4-210ENST00000498539 KANK4Q5T7N3 995 aaPredicted RBP25.04■■□□□ 1.6
LRCH4-210ENST00000498539 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
LRCH4-210ENST00000498539 NEURL4Q96JN8 1562 aa25.04■■□□□ 1.6
LRCH4-210ENST00000498539 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
LRCH4-210ENST00000498539 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
LRCH4-210ENST00000498539 PKD2Q13563 968 aa25■■□□□ 1.59
LRCH4-210ENST00000498539 MYOM3Q5VTT5 1437 aa25■■□□□ 1.59
LRCH4-210ENST00000498539 ABCC3O15438 1527 aa24.99■■□□□ 1.59
LRCH4-210ENST00000498539 RSPH4AQ5TD94 716 aa24.99■■□□□ 1.59
LRCH4-210ENST00000498539 EIF2AK4Q9P2K8 1649 aaKnown RBP24.99■■□□□ 1.59
LRCH4-210ENST00000498539 CEP152O94986 1710 aa24.98■■□□□ 1.59
LRCH4-210ENST00000498539 ZC3H13Q5T200 1668 aaKnown RBP24.98■■□□□ 1.59
LRCH4-210ENST00000498539 WASHC2CQ9Y4E1 1318 aa24.97■■□□□ 1.59
LRCH4-210ENST00000498539 CROCC2H7BZ55 1655 aa24.97■■□□□ 1.59
LRCH4-210ENST00000498539 TSPY4P0CV99 314 aa24.95■■□□□ 1.58
LRCH4-210ENST00000498539 TSPY10P0CW01 314 aa24.95■■□□□ 1.58
LRCH4-210ENST00000498539 SPATA31D1Q6ZQQ2 1576 aa24.95■■□□□ 1.58
LRCH4-210ENST00000498539 MIA2Q96PC5 1412 aa24.94■■□□□ 1.58
LRCH4-210ENST00000498539 DISP3Q9P2K9 1392 aa24.92■■□□□ 1.58
LRCH4-210ENST00000498539 UGGT1Q9NYU2 1555 aa24.91■■□□□ 1.58
LRCH4-210ENST00000498539 PTPN23Q9H3S7 1636 aa24.9■■□□□ 1.58
LRCH4-210ENST00000498539 NLRP1Q9C000 1473 aa24.9■■□□□ 1.58
LRCH4-210ENST00000498539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.9■■□□□ 1.583e-44■■■■■ 30.3
LRCH4-210ENST00000498539 ERVK-7P63135 1459 aa24.88■■□□□ 1.57
LRCH4-210ENST00000498539 DUOX2Q9NRD8 1548 aa24.87■■□□□ 1.57
LRCH4-210ENST00000498539 CFAP65Q6ZU64 1925 aaKnown RBP24.87■■□□□ 1.57
LRCH4-210ENST00000498539 VWDEQ8N2E2 1590 aa24.86■■□□□ 1.57
LRCH4-210ENST00000498539 UBAP1LF5GYI3 381 aa24.86■■□□□ 1.57
LRCH4-210ENST00000498539 DEPDC5O75140 1603 aa24.86■■□□□ 1.57
LRCH4-210ENST00000498539 SHANK2Q9UPX8 1470 aa24.84■■□□□ 1.57
LRCH4-210ENST00000498539 ILDR2Q71H61 639 aa24.84■■□□□ 1.57
LRCH4-210ENST00000498539 PRDM15P57071 1507 aaPredicted RBP24.84■■□□□ 1.57
LRCH4-210ENST00000498539 ABCC5O15440 1437 aa24.84■■□□□ 1.57
LRCH4-210ENST00000498539 IQGAP1P46940 1657 aa24.84■■□□□ 1.57
LRCH4-210ENST00000498539 UBR1Q8IWV7 1749 aa24.82■■□□□ 1.56
LRCH4-210ENST00000498539 CPS1P31327 1500 aa24.81■■□□□ 1.56
LRCH4-210ENST00000498539 KIF15Q9NS87 1388 aa24.81■■□□□ 1.56
LRCH4-210ENST00000498539 NPHP4O75161 1426 aaPredicted RBP24.81■■□□□ 1.56
LRCH4-210ENST00000498539 MED14O60244 1454 aa24.8■■□□□ 1.56
LRCH4-210ENST00000498539 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
LRCH4-210ENST00000498539 DAPK1P53355 1430 aa24.78■■□□□ 1.56
LRCH4-210ENST00000498539 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
LRCH4-210ENST00000498539 ANKLE2Q86XL3 938 aa24.77■■□□□ 1.56
LRCH4-210ENST00000498539 THEMISQ8N1K5 641 aaPredicted RBP24.77■■□□□ 1.56
LRCH4-210ENST00000498539 ERBINQ96RT1 1412 aa24.77■■□□□ 1.56
LRCH4-210ENST00000498539 RRP7BPQ9NSQ0 103 aa24.74■■□□□ 1.55
LRCH4-210ENST00000498539 ALKQ9UM73 1620 aa24.73■■□□□ 1.55
LRCH4-210ENST00000498539 PIK3C2BO00750 1634 aa24.71■■□□□ 1.55
LRCH4-210ENST00000498539 APLP2Q06481 763 aa24.7■■□□□ 1.54
LRCH4-210ENST00000498539 SCAF1Q9H7N4 1312 aaKnown RBP24.69■■□□□ 1.54
LRCH4-210ENST00000498539 ARHGAP31Q2M1Z3 1444 aa24.69■■□□□ 1.54
LRCH4-210ENST00000498539 SYNMO15061 1565 aa24.68■■□□□ 1.54
LRCH4-210ENST00000498539 PIP4K2BP78356 416 aa24.68■■□□□ 1.54
LRCH4-210ENST00000498539 SCAF11Q99590 1463 aaKnown RBP24.67■■□□□ 1.54
LRCH4-210ENST00000498539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.67■■□□□ 1.54
LRCH4-210ENST00000498539 ARHGAP23Q9P227 1491 aa24.66■■□□□ 1.54
LRCH4-210ENST00000498539 SLIT1O75093 1534 aa24.66■■□□□ 1.54
LRCH4-210ENST00000498539 CHIC2Q9UKJ5 165 aa24.65■■□□□ 1.54
LRCH4-210ENST00000498539 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.53
LRCH4-210ENST00000498539 HSPA1LP34931 641 aa24.63■■□□□ 1.53
LRCH4-210ENST00000498539 LMTK2Q8IWU2 1503 aa24.62■■□□□ 1.53
LRCH4-210ENST00000498539 EFCAB6Q5THR3 1501 aa24.61■■□□□ 1.53
LRCH4-210ENST00000498539 ANKRD30AQ9BXX3 1397 aa24.61■■□□□ 1.53
LRCH4-210ENST00000498539 MED1Q15648 1581 aaPredicted RBP24.61■■□□□ 1.53
LRCH4-210ENST00000498539 ADGRL2O95490 1459 aa24.59■■□□□ 1.53
LRCH4-210ENST00000498539 XIRP1Q702N8 1843 aaKnown RBP24.59■■□□□ 1.53
LRCH4-210ENST00000498539 SOCS7O14512 581 aa24.59■■□□□ 1.53
LRCH4-210ENST00000498539 TOM1O60784 492 aa24.59■■□□□ 1.53
LRCH4-210ENST00000498539 LTKP29376 864 aa24.59■■□□□ 1.53
LRCH4-210ENST00000498539 KANK1Q14678 1352 aa24.58■■□□□ 1.53
LRCH4-210ENST00000498539 KDM5AP29375 1690 aaKnown RBP24.56■■□□□ 1.52
LRCH4-210ENST00000498539 TXNDC2Q86VQ3 553 aa24.54■■□□□ 1.52
LRCH4-210ENST00000498539 ADGRB3O60242 1522 aa24.54■■□□□ 1.52
LRCH4-210ENST00000498539 TMEM2Q9UHN6 1383 aa24.53■■□□□ 1.52
LRCH4-210ENST00000498539 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
LRCH4-210ENST00000498539 NOS1P29475 1434 aa24.51■■□□□ 1.51
LRCH4-210ENST00000498539 MYO5BQ9ULV0 1848 aa24.5■■□□□ 1.51
LRCH4-210ENST00000498539 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
LRCH4-210ENST00000498539 TET3O43151 1660 aa24.48■■□□□ 1.51
LRCH4-210ENST00000498539 IDI1Q13907 227 aa24.48■■□□□ 1.51
LRCH4-210ENST00000498539 ANKRD50Q9ULJ7 1429 aa24.47■■□□□ 1.51
LRCH4-210ENST00000498539 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
LRCH4-210ENST00000498539 STAG3Q9UJ98 1225 aa24.46■■□□□ 1.51
LRCH4-210ENST00000498539 EID1Q9Y6B2 187 aa24.46■■□□□ 1.51
LRCH4-210ENST00000498539 UNC13BO14795 1591 aa24.46■■□□□ 1.51
LRCH4-210ENST00000498539 RPRD2Q5VT52 1461 aaKnown RBP24.4■■□□□ 1.5
LRCH4-210ENST00000498539 NWD1Q149M9 1564 aa24.4■■□□□ 1.5
LRCH4-210ENST00000498539 E9PCH4 1651 aa24.4■■□□□ 1.5
LRCH4-210ENST00000498539 SLC26A8Q96RN1 970 aa24.38■■□□□ 1.49
LRCH4-210ENST00000498539 TMEM131LA2VDJ0 1609 aa24.38■■□□□ 1.49
LRCH4-210ENST00000498539 TMEM94Q12767 1356 aa24.36■■□□□ 1.49
LRCH4-210ENST00000498539 ZFYVE9O95405 1425 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms