RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TCOF1Q13428 1488 aaKnown RBP29.42■■■□□ 2.3
PRKCB-209ENST00000498058 KDM5DQ9BY66 1539 aa29.4■■■□□ 2.3
PRKCB-209ENST00000498058 DNMT1P26358 1616 aaKnown RBP29.4■■■□□ 2.3
PRKCB-209ENST00000498058 TSPY4P0CV99 314 aa29.39■■■□□ 2.3
PRKCB-209ENST00000498058 TSPY10P0CW01 314 aa29.39■■■□□ 2.3
PRKCB-209ENST00000498058 A2ML1A8K2U0 1454 aa29.39■■■□□ 2.3
PRKCB-209ENST00000498058 MAST1Q9Y2H9 1570 aa29.38■■■□□ 2.29
PRKCB-209ENST00000498058 PZPP20742 1482 aa29.37■■■□□ 2.29
PRKCB-209ENST00000498058 ZNF335Q9H4Z2 1342 aaPredicted RBP29.37■■■□□ 2.29
PRKCB-209ENST00000498058 PKD2Q13563 968 aa29.36■■■□□ 2.29
PRKCB-209ENST00000498058 MYOM3Q5VTT5 1437 aa29.36■■■□□ 2.29
PRKCB-209ENST00000498058 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
PRKCB-209ENST00000498058 WASHC2CQ9Y4E1 1318 aa29.35■■■□□ 2.29
PRKCB-209ENST00000498058 TNRQ92752 1358 aa29.35■■■□□ 2.29
PRKCB-209ENST00000498058 MIA2Q96PC5 1412 aa29.33■■■□□ 2.29
PRKCB-209ENST00000498058 RNF17Q9BXT8 1623 aaKnown RBP29.31■■■□□ 2.28
PRKCB-209ENST00000498058 IQSEC2Q5JU85 1478 aa29.3■■■□□ 2.28
PRKCB-209ENST00000498058 MROH1Q8NDA8 1641 aa29.27■■■□□ 2.28
PRKCB-209ENST00000498058 NEURL4Q96JN8 1562 aa29.26■■■□□ 2.28
PRKCB-209ENST00000498058 ABCC3O15438 1527 aa29.26■■■□□ 2.27
PRKCB-209ENST00000498058 EIF2AK4Q9P2K8 1649 aaKnown RBP29.24■■■□□ 2.27
PRKCB-209ENST00000498058 POLR1AO95602 1720 aaPredicted RBP29.24■■■□□ 2.27
PRKCB-209ENST00000498058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.2■■■□□ 2.26
PRKCB-209ENST00000498058 CEP152O94986 1710 aa29.2■■■□□ 2.26
PRKCB-209ENST00000498058 PTPN23Q9H3S7 1636 aa29.2■■■□□ 2.26
PRKCB-209ENST00000498058 ABCC5O15440 1437 aa29.2■■■□□ 2.26
PRKCB-209ENST00000498058 ZC3H13Q5T200 1668 aaKnown RBP29.19■■■□□ 2.26
PRKCB-209ENST00000498058 CROCC2H7BZ55 1655 aa29.18■■■□□ 2.26
PRKCB-209ENST00000498058 NLRP1Q9C000 1473 aa29.18■■■□□ 2.26
PRKCB-209ENST00000498058 SPATA31D1Q6ZQQ2 1576 aa29.18■■■□□ 2.26
PRKCB-209ENST00000498058 DUOX2Q9NRD8 1548 aa29.17■■■□□ 2.26
PRKCB-209ENST00000498058 UGGT1Q9NYU2 1555 aa29.17■■■□□ 2.26
PRKCB-209ENST00000498058 CFAP65Q6ZU64 1925 aaKnown RBP29.16■■■□□ 2.26
PRKCB-209ENST00000498058 ERVK-7P63135 1459 aa29.14■■■□□ 2.26
PRKCB-209ENST00000498058 SHANK2Q9UPX8 1470 aa29.13■■■□□ 2.25
PRKCB-209ENST00000498058 KIF15Q9NS87 1388 aa29.13■■■□□ 2.25
PRKCB-209ENST00000498058 THEMISQ8N1K5 641 aaPredicted RBP29.12■■■□□ 2.25
PRKCB-209ENST00000498058 UBAP1LF5GYI3 381 aa29.11■■■□□ 2.25
PRKCB-209ENST00000498058 ANKLE2Q86XL3 938 aa29.11■■■□□ 2.25
PRKCB-209ENST00000498058 RRP7BPQ9NSQ0 103 aa29.11■■■□□ 2.25
PRKCB-209ENST00000498058 DAPK1P53355 1430 aa29.11■■■□□ 2.25
PRKCB-209ENST00000498058 FGD6Q6ZV73 1430 aa29.11■■■□□ 2.25
PRKCB-209ENST00000498058 APLP2Q06481 763 aa29.1■■■□□ 2.25
PRKCB-209ENST00000498058 DEPDC5O75140 1603 aa29.09■■■□□ 2.25
PRKCB-209ENST00000498058 DISP3Q9P2K9 1392 aa29.08■■■□□ 2.25
PRKCB-209ENST00000498058 MED14O60244 1454 aa29.08■■■□□ 2.25
PRKCB-209ENST00000498058 VWDEQ8N2E2 1590 aa29.08■■■□□ 2.25
PRKCB-209ENST00000498058 PRDM15P57071 1507 aaPredicted RBP29.07■■■□□ 2.24
PRKCB-209ENST00000498058 NPHP4O75161 1426 aaPredicted RBP29.06■■■□□ 2.24
PRKCB-209ENST00000498058 ERBINQ96RT1 1412 aa29.05■■■□□ 2.24
PRKCB-209ENST00000498058 ILDR2Q71H61 639 aa29.05■■■□□ 2.24
PRKCB-209ENST00000498058 UBR1Q8IWV7 1749 aa29.03■■■□□ 2.24
PRKCB-209ENST00000498058 CHIC2Q9UKJ5 165 aa29.02■■■□□ 2.24
PRKCB-209ENST00000498058 CPS1P31327 1500 aa29.02■■■□□ 2.24
PRKCB-209ENST00000498058 IQGAP1P46940 1657 aa29.02■■■□□ 2.24
PRKCB-209ENST00000498058 ARHGAP31Q2M1Z3 1444 aa29■■■□□ 2.23
PRKCB-209ENST00000498058 STRCP1A6NGW2 1772 aa28.99■■■□□ 2.23
PRKCB-209ENST00000498058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.99■■■□□ 2.23
PRKCB-209ENST00000498058 ANKRD30AQ9BXX3 1397 aa28.93■■■□□ 2.22
PRKCB-209ENST00000498058 ALKQ9UM73 1620 aa28.93■■■□□ 2.22
PRKCB-209ENST00000498058 LTKP29376 864 aa28.92■■■□□ 2.22
PRKCB-209ENST00000498058 ARHGAP23Q9P227 1491 aa28.91■■■□□ 2.22
PRKCB-209ENST00000498058 PIK3C2BO00750 1634 aa28.91■■■□□ 2.22
PRKCB-209ENST00000498058 SLIT1O75093 1534 aa28.89■■■□□ 2.22
PRKCB-209ENST00000498058 LMTK2Q8IWU2 1503 aa28.89■■■□□ 2.22
PRKCB-209ENST00000498058 SCAF11Q99590 1463 aaKnown RBP28.89■■■□□ 2.22
PRKCB-209ENST00000498058 PIP4K2BP78356 416 aa28.88■■■□□ 2.21
PRKCB-209ENST00000498058 ADGRL2O95490 1459 aa28.88■■■□□ 2.21
PRKCB-209ENST00000498058 KANK1Q14678 1352 aa28.87■■■□□ 2.21
PRKCB-209ENST00000498058 HSPA1LP34931 641 aa28.86■■■□□ 2.21
PRKCB-209ENST00000498058 LRRC7Q96NW7 1537 aa28.85■■■□□ 2.21
PRKCB-209ENST00000498058 TOM1O60784 492 aa28.85■■■□□ 2.21
PRKCB-209ENST00000498058 SCAF1Q9H7N4 1312 aaKnown RBP28.85■■■□□ 2.21
PRKCB-209ENST00000498058 SYNMO15061 1565 aa28.84■■■□□ 2.21
PRKCB-209ENST00000498058 FAM50AQ14320 339 aaKnown RBP28.84■■■□□ 2.21
PRKCB-209ENST00000498058 TXNDC2Q86VQ3 553 aa28.84■■■□□ 2.21
PRKCB-209ENST00000498058 IDI1Q13907 227 aa28.81■■■□□ 2.2
PRKCB-209ENST00000498058 EFCAB6Q5THR3 1501 aa28.79■■■□□ 2.2
PRKCB-209ENST00000498058 NOS1P29475 1434 aa28.79■■■□□ 2.2
PRKCB-209ENST00000498058 TMEM2Q9UHN6 1383 aa28.79■■■□□ 2.2
PRKCB-209ENST00000498058 KDM5AP29375 1690 aaKnown RBP28.76■■■□□ 2.19
PRKCB-209ENST00000498058 ANKRD50Q9ULJ7 1429 aa28.76■■■□□ 2.19
PRKCB-209ENST00000498058 XIRP1Q702N8 1843 aaKnown RBP28.75■■■□□ 2.19
PRKCB-209ENST00000498058 SOCS7O14512 581 aa28.74■■■□□ 2.19
PRKCB-209ENST00000498058 EID1Q9Y6B2 187 aa28.73■■■□□ 2.19
PRKCB-209ENST00000498058 STAG3Q9UJ98 1225 aa28.72■■■□□ 2.19
PRKCB-209ENST00000498058 ADGRB3O60242 1522 aa28.69■■■□□ 2.18
PRKCB-209ENST00000498058 TET3O43151 1660 aa28.68■■■□□ 2.18
PRKCB-209ENST00000498058 MED1Q15648 1581 aaPredicted RBP28.67■■■□□ 2.18
PRKCB-209ENST00000498058 MYO5BQ9ULV0 1848 aa28.65■■■□□ 2.18
PRKCB-209ENST00000498058 UNC13BO14795 1591 aa28.64■■■□□ 2.18
PRKCB-209ENST00000498058 RPRD2Q5VT52 1461 aaKnown RBP28.64■■■□□ 2.17
PRKCB-209ENST00000498058 SENP3Q9H4L4 574 aaPredicted RBP28.63■■■□□ 2.17
PRKCB-209ENST00000498058 SLC52A1Q9NWF4 448 aa28.63■■■□□ 2.17
PRKCB-209ENST00000498058 SLC26A8Q96RN1 970 aa28.62■■■□□ 2.17
PRKCB-209ENST00000498058 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
PRKCB-209ENST00000498058 GCC2Q8IWJ2 1684 aa28.61■■■□□ 2.17
PRKCB-209ENST00000498058 ROCK1Q13464 1354 aa28.58■■■□□ 2.17
PRKCB-209ENST00000498058 E9PCH4 1651 aa28.58■■■□□ 2.16
PRKCB-209ENST00000498058 KCNA6P17658 529 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms