RNA–Protein interactions for RNA: ENST00000497582.5

TMEM9-211, Transcript of transmembrane protein 9, humanhuman

TSL 3

Gene TMEM9, Length 1,075 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-211ENST00000497582 ZNF142P52746 1687 aaPredicted RBP35.41■■■■□ 3.26
TMEM9-211ENST00000497582 KDM5DQ9BY66 1539 aa35.39■■■■□ 3.26
TMEM9-211ENST00000497582 CEP170BQ9Y4F5 1589 aaPredicted RBP35.38■■■■□ 3.25
TMEM9-211ENST00000497582 WASHC2CQ9Y4E1 1318 aa35.37■■■■□ 3.25
TMEM9-211ENST00000497582 FBXO31Q5XUX0 539 aaPredicted RBP35.37■■■■□ 3.25
TMEM9-211ENST00000497582 NCKAP5LQ9HCH0 1330 aa35.35■■■■□ 3.25
TMEM9-211ENST00000497582 FAM135AQ9P2D6 1515 aa35.34■■■■□ 3.25
TMEM9-211ENST00000497582 PTPN23Q9H3S7 1636 aa35.32■■■■□ 3.25
TMEM9-211ENST00000497582 PZPP20742 1482 aa35.31■■■■□ 3.24
TMEM9-211ENST00000497582 RNF17Q9BXT8 1623 aaKnown RBP35.29■■■■□ 3.24
TMEM9-211ENST00000497582 A2ML1A8K2U0 1454 aa35.29■■■■□ 3.24
TMEM9-211ENST00000497582 TNRQ92752 1358 aa35.28■■■■□ 3.24
TMEM9-211ENST00000497582 ABCC5O15440 1437 aa35.28■■■■□ 3.24
TMEM9-211ENST00000497582 PLA2R1Q13018 1463 aa35.27■■■■□ 3.24
TMEM9-211ENST00000497582 DNMT1P26358 1616 aaKnown RBP35.25■■■■□ 3.23
TMEM9-211ENST00000497582 EIF2AK4Q9P2K8 1649 aaKnown RBP35.25■■■■□ 3.23
TMEM9-211ENST00000497582 CROCC2H7BZ55 1655 aa35.25■■■■□ 3.23
TMEM9-211ENST00000497582 FGD6Q6ZV73 1430 aa35.24■■■■□ 3.23
TMEM9-211ENST00000497582 TCOF1Q13428 1488 aaKnown RBP35.23■■■■□ 3.23
TMEM9-211ENST00000497582 LTBP4Q8N2S1 1624 aa35.23■■■■□ 3.23
TMEM9-211ENST00000497582 PKD2Q13563 968 aa35.22■■■■□ 3.23
TMEM9-211ENST00000497582 ABCC3O15438 1527 aa35.22■■■■□ 3.23
TMEM9-211ENST00000497582 DUOX2Q9NRD8 1548 aa35.22■■■■□ 3.23
TMEM9-211ENST00000497582 MROH1Q8NDA8 1641 aa35.21■■■■□ 3.23
TMEM9-211ENST00000497582 SHANK2Q9UPX8 1470 aa35.2■■■■□ 3.23
TMEM9-211ENST00000497582 DAPK1P53355 1430 aa35.19■■■■□ 3.22
TMEM9-211ENST00000497582 KIF15Q9NS87 1388 aa35.19■■■■□ 3.22
TMEM9-211ENST00000497582 RRP7BPQ9NSQ0 103 aa35.19■■■■□ 3.22
TMEM9-211ENST00000497582 ZC3H13Q5T200 1668 aaKnown RBP35.16■■■■□ 3.22
TMEM9-211ENST00000497582 CEP152O94986 1710 aa35.15■■■■□ 3.22
TMEM9-211ENST00000497582 CFAP65Q6ZU64 1925 aaKnown RBP35.13■■■■□ 3.21
TMEM9-211ENST00000497582 ZNF335Q9H4Z2 1342 aaPredicted RBP35.12■■■■□ 3.21
TMEM9-211ENST00000497582 CHIC2Q9UKJ5 165 aa35.11■■■■□ 3.21
TMEM9-211ENST00000497582 NLRP1Q9C000 1473 aa35.09■■■■□ 3.21
TMEM9-211ENST00000497582 ERBINQ96RT1 1412 aa35.08■■■■□ 3.21
TMEM9-211ENST00000497582 SPATA31D1Q6ZQQ2 1576 aa35.07■■■■□ 3.2
TMEM9-211ENST00000497582 POLR1AO95602 1720 aaPredicted RBP35.06■■■■□ 3.2
TMEM9-211ENST00000497582 ERVK-7P63135 1459 aa35.05■■■■□ 3.2
TMEM9-211ENST00000497582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.05■■■■□ 3.23e-7■□□□□ 11
TMEM9-211ENST00000497582 THEMISQ8N1K5 641 aaPredicted RBP35.04■■■■□ 3.2
TMEM9-211ENST00000497582 NEURL4Q96JN8 1562 aa35.04■■■■□ 3.2
TMEM9-211ENST00000497582 UGGT1Q9NYU2 1555 aa35.04■■■■□ 3.2
TMEM9-211ENST00000497582 PRDM15P57071 1507 aaPredicted RBP35.03■■■■□ 3.2
TMEM9-211ENST00000497582 ANKRD30AQ9BXX3 1397 aa35.02■■■■□ 3.2
TMEM9-211ENST00000497582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.02■■■■□ 3.2
TMEM9-211ENST00000497582 FAM50AQ14320 339 aaKnown RBP35■■■■□ 3.19
TMEM9-211ENST00000497582 IQSEC2Q5JU85 1478 aa35■■■■□ 3.19
TMEM9-211ENST00000497582 ANKLE2Q86XL3 938 aa34.99■■■■□ 3.19
TMEM9-211ENST00000497582 DEPDC5O75140 1603 aa34.99■■■■□ 3.19
TMEM9-211ENST00000497582 ARHGAP31Q2M1Z3 1444 aa34.93■■■■□ 3.18
TMEM9-211ENST00000497582 ADGRL2O95490 1459 aa34.91■■■■□ 3.18
TMEM9-211ENST00000497582 KANK1Q14678 1352 aa34.9■■■■□ 3.18
TMEM9-211ENST00000497582 NPHP4O75161 1426 aaPredicted RBP34.88■■■■□ 3.17
TMEM9-211ENST00000497582 UBR1Q8IWV7 1749 aa34.87■■■■□ 3.17
TMEM9-211ENST00000497582 MED14O60244 1454 aa34.87■■■■□ 3.17
TMEM9-211ENST00000497582 VWDEQ8N2E2 1590 aa34.85■■■■□ 3.17
TMEM9-211ENST00000497582 LMTK2Q8IWU2 1503 aa34.82■■■■□ 3.16
TMEM9-211ENST00000497582 UBAP1LF5GYI3 381 aa34.81■■■■□ 3.16
TMEM9-211ENST00000497582 PPARGC1BQ86YN6 1023 aaKnown RBP34.81■■■■□ 3.16
TMEM9-211ENST00000497582 IQGAP1P46940 1657 aa34.81■■■■□ 3.16
TMEM9-211ENST00000497582 ANKRD50Q9ULJ7 1429 aa34.78■■■■□ 3.16
TMEM9-211ENST00000497582 CPS1P31327 1500 aa34.76■■■■□ 3.16
TMEM9-211ENST00000497582 PIK3C2BO00750 1634 aa34.76■■■■□ 3.15
TMEM9-211ENST00000497582 LTKP29376 864 aa34.73■■■■□ 3.15
TMEM9-211ENST00000497582 ARHGAP23Q9P227 1491 aa34.72■■■■□ 3.15
TMEM9-211ENST00000497582 EFCAB6Q5THR3 1501 aa34.72■■■■□ 3.15
TMEM9-211ENST00000497582 SCAF11Q99590 1463 aaKnown RBP34.71■■■■□ 3.15
TMEM9-211ENST00000497582 SLIT1O75093 1534 aa34.71■■■■□ 3.15
TMEM9-211ENST00000497582 SYNMO15061 1565 aa34.7■■■■□ 3.15
TMEM9-211ENST00000497582 IDI1Q13907 227 aa34.7■■■■□ 3.15
TMEM9-211ENST00000497582 TXNDC2Q86VQ3 553 aa34.7■■■■□ 3.15
TMEM9-211ENST00000497582 STRCP1A6NGW2 1772 aa34.68■■■■□ 3.14
TMEM9-211ENST00000497582 NOS1P29475 1434 aa34.67■■■■□ 3.14
TMEM9-211ENST00000497582 STAG3Q9UJ98 1225 aa34.66■■■■□ 3.14
TMEM9-211ENST00000497582 ITGAEP38570 1179 aa34.63■■■■□ 3.13
TMEM9-211ENST00000497582 ROCK1Q13464 1354 aa34.62■■■■□ 3.13
TMEM9-211ENST00000497582 TMEM2Q9UHN6 1383 aa34.62■■■■□ 3.13
TMEM9-211ENST00000497582 EID1Q9Y6B2 187 aa34.62■■■■□ 3.13
TMEM9-211ENST00000497582 KDM5AP29375 1690 aaKnown RBP34.6■■■■□ 3.13
TMEM9-211ENST00000497582 TET3O43151 1660 aa34.6■■■■□ 3.13
TMEM9-211ENST00000497582 UNC13BO14795 1591 aa34.59■■■■□ 3.13
TMEM9-211ENST00000497582 TOM1O60784 492 aa34.56■■■■□ 3.12
TMEM9-211ENST00000497582 PIP4K2BP78356 416 aa34.56■■■■□ 3.12
TMEM9-211ENST00000497582 RPRD2Q5VT52 1461 aaKnown RBP34.56■■■■□ 3.12
TMEM9-211ENST00000497582 SCAF1Q9H7N4 1312 aaKnown RBP34.55■■■■□ 3.12
TMEM9-211ENST00000497582 LRRC7Q96NW7 1537 aa34.55■■■■□ 3.12
TMEM9-211ENST00000497582 DISP3Q9P2K9 1392 aa34.55■■■■□ 3.12
TMEM9-211ENST00000497582 SLC52A1Q9NWF4 448 aa34.55■■■■□ 3.12
TMEM9-211ENST00000497582 ADGRB3O60242 1522 aa34.54■■■■□ 3.12
TMEM9-211ENST00000497582 GCC2Q8IWJ2 1684 aa34.54■■■■□ 3.12
TMEM9-211ENST00000497582 ALKQ9UM73 1620 aa34.5■■■■□ 3.11
TMEM9-211ENST00000497582 MYO5BQ9ULV0 1848 aa34.48■■■■□ 3.11
TMEM9-211ENST00000497582 E9PCH4 1651 aa34.47■■■■□ 3.11
TMEM9-211ENST00000497582 IQGAP3Q86VI3 1631 aa34.46■■■■□ 3.11
TMEM9-211ENST00000497582 HSPA1LP34931 641 aa34.45■■■■□ 3.11
TMEM9-211ENST00000497582 NUP155O75694 1391 aa34.43■■■■□ 3.1
TMEM9-211ENST00000497582 SLC26A8Q96RN1 970 aa34.42■■■■□ 3.1
TMEM9-211ENST00000497582 XIRP1Q702N8 1843 aaKnown RBP34.4■■■■□ 3.1
TMEM9-211ENST00000497582 TMEM131LA2VDJ0 1609 aa34.4■■■■□ 3.1
TMEM9-211ENST00000497582 ILDR2Q71H61 639 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms