RNA–Protein interactions for RNA: ENST00000497183.5

PRKCZ-223, Transcript of protein kinase C zeta, human

TSL 3

Gene PRKCZ, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-223	ENST00000497183	KDM5D	Q9BY66	1539 aa		12.12	□□□□□ -0.47
PRKCZ-223	ENST00000497183	XIRP1	Q702N8	1843 aa	Known RBP	12.12	□□□□□ -0.47
PRKCZ-223	ENST00000497183	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.12	□□□□□ -0.47
PRKCZ-223	ENST00000497183	PZP	P20742	1482 aa		12.12	□□□□□ -0.47
PRKCZ-223	ENST00000497183	ZC3H13	Q5T200	1668 aa	Known RBP	12.12	□□□□□ -0.47
PRKCZ-223	ENST00000497183	ZNF644	Q9H582	1327 aa	Predicted RBP	12.11	□□□□□ -0.47
PRKCZ-223	ENST00000497183	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.11	□□□□□ -0.47
PRKCZ-223	ENST00000497183	RNF17	Q9BXT8	1623 aa	Known RBP	12.11	□□□□□ -0.47
PRKCZ-223	ENST00000497183	IQGAP1	P46940	1657 aa		12.11	□□□□□ -0.47
PRKCZ-223	ENST00000497183	MROH1	Q8NDA8	1641 aa		12.1	□□□□□ -0.47
PRKCZ-223	ENST00000497183	SCAF1	Q9H7N4	1312 aa	Known RBP	12.1	□□□□□ -0.47
PRKCZ-223	ENST00000497183	MED14	O60244	1454 aa		12.09	□□□□□ -0.47
PRKCZ-223	ENST00000497183	SHANK2	Q9UPX8	1470 aa		12.09	□□□□□ -0.47
PRKCZ-223	ENST00000497183	CCNB3	Q8WWL7	1395 aa		12.09	□□□□□ -0.47
PRKCZ-223	ENST00000497183	CFDP1	Q9UEE9	299 aa	Predicted RBP	12.08	□□□□□ -0.48
PRKCZ-223	ENST00000497183	CEP162	Q5TB80	1403 aa		12.08	□□□□□ -0.48
PRKCZ-223	ENST00000497183	ARHGEF5	Q12774	1597 aa		12.08	□□□□□ -0.48
PRKCZ-223	ENST00000497183	CAMSAP2	Q08AD1	1489 aa		12.08	□□□□□ -0.48
PRKCZ-223	ENST00000497183	DHX29	Q7Z478	1369 aa	Known RBP	12.07	□□□□□ -0.48
PRKCZ-223	ENST00000497183	PIP4K2B	P78356	416 aa		12.07	□□□□□ -0.48
PRKCZ-223	ENST00000497183	GGT6	Q6P531	493 aa		12.07	□□□□□ -0.48
PRKCZ-223	ENST00000497183	UBR1	Q8IWV7	1749 aa		12.07	□□□□□ -0.48
PRKCZ-223	ENST00000497183	PPP6R1	Q9UPN7	881 aa		12.07	□□□□□ -0.48
PRKCZ-223	ENST00000497183	CEP152	O94986	1710 aa		12.06	□□□□□ -0.48
PRKCZ-223	ENST00000497183	SYNM	O15061	1565 aa		12.06	□□□□□ -0.48
PRKCZ-223	ENST00000497183	CCDC141	Q6ZP82	1450 aa		12.06	□□□□□ -0.48
PRKCZ-223	ENST00000497183	TNR	Q92752	1358 aa		12.05	□□□□□ -0.48
PRKCZ-223	ENST00000497183	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.05	□□□□□ -0.48
PRKCZ-223	ENST00000497183	RGS17	Q9UGC6	210 aa	Predicted RBP	12.05	□□□□□ -0.48
PRKCZ-223	ENST00000497183	CFAP65	Q6ZU64	1925 aa	Known RBP	12.05	□□□□□ -0.48
PRKCZ-223	ENST00000497183	UGGT1	Q9NYU2	1555 aa		12.05	□□□□□ -0.48
PRKCZ-223	ENST00000497183	MAST1	Q9Y2H9	1570 aa		12.05	□□□□□ -0.48
PRKCZ-223	ENST00000497183	MTUS2	Q5JR59	1369 aa		12.05	□□□□□ -0.48
PRKCZ-223	ENST00000497183	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.04	□□□□□ -0.48
PRKCZ-223	ENST00000497183	NLRP1	Q9C000	1473 aa		12.04	□□□□□ -0.48
PRKCZ-223	ENST00000497183	ABCC3	O15438	1527 aa		12.04	□□□□□ -0.48
PRKCZ-223	ENST00000497183	NCOA2	Q15596	1464 aa		12.03	□□□□□ -0.48
PRKCZ-223	ENST00000497183	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
PRKCZ-223	ENST00000497183	LRRC7	Q96NW7	1537 aa		12.02	□□□□□ -0.48
PRKCZ-223	ENST00000497183	MIA2	Q96PC5	1412 aa		12.02	□□□□□ -0.49
PRKCZ-223	ENST00000497183	NPHP4	O75161	1426 aa	Predicted RBP	12.01	□□□□□ -0.49
PRKCZ-223	ENST00000497183	ERVK-7	P63135	1459 aa		11.99	□□□□□ -0.49
PRKCZ-223	ENST00000497183	CROCC2	H7BZ55	1655 aa		11.99	□□□□□ -0.49
PRKCZ-223	ENST00000497183	KIF3B	O15066	747 aa		11.98	□□□□□ -0.49
PRKCZ-223	ENST00000497183	ARHGAP23	Q9P227	1491 aa		11.97	□□□□□ -0.49
PRKCZ-223	ENST00000497183	SLIT1	O75093	1534 aa		11.96	□□□□□ -0.49
PRKCZ-223	ENST00000497183	PRDM15	P57071	1507 aa	Predicted RBP	11.96	□□□□□ -0.5
PRKCZ-223	ENST00000497183	KDM5A	P29375	1690 aa	Known RBP	11.95	□□□□□ -0.5
PRKCZ-223	ENST00000497183	TOM1	O60784	492 aa		11.95	□□□□□ -0.5
PRKCZ-223	ENST00000497183	SENP3	Q9H4L4	574 aa	Predicted RBP	11.95	□□□□□ -0.5
PRKCZ-223	ENST00000497183	PIK3C2B	O00750	1634 aa		11.95	□□□□□ -0.5
PRKCZ-223	ENST00000497183	ANKLE2	Q86XL3	938 aa		11.94	□□□□□ -0.5
PRKCZ-223	ENST00000497183	WASHC2C	Q9Y4E1	1318 aa		11.93	□□□□□ -0.5
PRKCZ-223	ENST00000497183	POTEA	Q6S8J7	498 aa		11.93	□□□□□ -0.5
PRKCZ-223	ENST00000497183	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.93	□□□□□ -0.5
PRKCZ-223	ENST00000497183	LRRC9	Q6ZRR7	1453 aa		11.92	□□□□□ -0.5
PRKCZ-223	ENST00000497183	SCAF11	Q99590	1463 aa	Known RBP	11.92	□□□□□ -0.5
PRKCZ-223	ENST00000497183	MAP3K1	Q13233	1512 aa		11.91	□□□□□ -0.5
PRKCZ-223	ENST00000497183	SRCAP	Q6ZRS2	3230 aa		11.9	□□□□□ -0.5
PRKCZ-223	ENST00000497183	MYO5B	Q9ULV0	1848 aa		11.9	□□□□□ -0.5
PRKCZ-223	ENST00000497183	TET3	O43151	1660 aa		11.9	□□□□□ -0.5
PRKCZ-223	ENST00000497183	DUOX2	Q9NRD8	1548 aa		11.9	□□□□□ -0.5
PRKCZ-223	ENST00000497183	SETD1A	O15047	1707 aa	Known RBP	11.89	□□□□□ -0.51
PRKCZ-223	ENST00000497183	ARHGAP31	Q2M1Z3	1444 aa		11.89	□□□□□ -0.51
PRKCZ-223	ENST00000497183	RSPH4A	Q5TD94	716 aa		11.89	□□□□□ -0.51
PRKCZ-223	ENST00000497183	ROBO1	Q9Y6N7	1651 aa		11.89	□□□□□ -0.51
PRKCZ-223	ENST00000497183	NWD1	Q149M9	1564 aa		11.88	□□□□□ -0.51
PRKCZ-223	ENST00000497183	LTK	P29376	864 aa		11.88	□□□□□ -0.51
PRKCZ-223	ENST00000497183	CHD2	O14647	1828 aa	Known RBP	11.85	□□□□□ -0.51
PRKCZ-223	ENST00000497183	LMTK2	Q8IWU2	1503 aa		11.85	□□□□□ -0.51
PRKCZ-223	ENST00000497183	MYOM3	Q5VTT5	1437 aa		11.85	□□□□□ -0.51
PRKCZ-223	ENST00000497183	VPS8	Q8N3P4	1428 aa		11.85	□□□□□ -0.51
PRKCZ-223	ENST00000497183	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
PRKCZ-223	ENST00000497183	PTPN23	Q9H3S7	1636 aa		11.84	□□□□□ -0.51
PRKCZ-223	ENST00000497183	ERBIN	Q96RT1	1412 aa		11.84	□□□□□ -0.51
PRKCZ-223	ENST00000497183	FAM135B	Q49AJ0	1406 aa		11.83	□□□□□ -0.52
PRKCZ-223	ENST00000497183	EFCAB6	Q5THR3	1501 aa		11.82	□□□□□ -0.52
PRKCZ-223	ENST00000497183	KANK4	Q5T7N3	995 aa	Predicted RBP	11.82	□□□□□ -0.52
PRKCZ-223	ENST00000497183	ABCC5	O15440	1437 aa		11.82	□□□□□ -0.52
PRKCZ-223	ENST00000497183	ADGRB3	O60242	1522 aa		11.81	□□□□□ -0.52
PRKCZ-223	ENST00000497183	TMEM2	Q9UHN6	1383 aa		11.81	□□□□□ -0.52
PRKCZ-223	ENST00000497183	PHLPP1	O60346	1717 aa		11.81	□□□□□ -0.52
PRKCZ-223	ENST00000497183	TSPY4	P0CV99	314 aa		11.81	□□□□□ -0.52
PRKCZ-223	ENST00000497183	TSPY10	P0CW01	314 aa		11.81	□□□□□ -0.52
PRKCZ-223	ENST00000497183	COL16A1	Q07092	1604 aa	Predicted RBP	11.81	□□□□□ -0.52
PRKCZ-223	ENST00000497183	GCC2	Q8IWJ2	1684 aa		11.81	□□□□□ -0.52
PRKCZ-223	ENST00000497183	KIF15	Q9NS87	1388 aa		11.8	□□□□□ -0.52
PRKCZ-223	ENST00000497183	NOS1	P29475	1434 aa		11.79	□□□□□ -0.52
PRKCZ-223	ENST00000497183	NKTR	P30414	1462 aa	Known RBP	11.79	□□□□□ -0.52
PRKCZ-223	ENST00000497183	TMEM94	Q12767	1356 aa		11.79	□□□□□ -0.52
PRKCZ-223	ENST00000497183	TXNDC2	Q86VQ3	553 aa		11.78	□□□□□ -0.52
PRKCZ-223	ENST00000497183	DAPK1	P53355	1430 aa		11.77	□□□□□ -0.52
PRKCZ-223	ENST00000497183	TMEM131L	A2VDJ0	1609 aa		11.77	□□□□□ -0.53
PRKCZ-223	ENST00000497183	ZFYVE9	O95405	1425 aa		11.76	□□□□□ -0.53
PRKCZ-223	ENST00000497183	SHPRH	Q149N8	1683 aa		11.75	□□□□□ -0.53
PRKCZ-223	ENST00000497183	LRP6	O75581	1613 aa		11.75	□□□□□ -0.53
PRKCZ-223	ENST00000497183	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKCZ-223	ENST00000497183	ADGRL2	O95490	1459 aa		11.73	□□□□□ -0.53
PRKCZ-223	ENST00000497183	IDI1	Q13907	227 aa		11.73	□□□□□ -0.53
PRKCZ-223	ENST00000497183	FGD6	Q6ZV73	1430 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms