RNA–Protein interactions for RNA: ENST00000497183.5

PRKCZ-223, Transcript of protein kinase C zeta, humanhuman

TSL 3

Gene PRKCZ, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-223ENST00000497183 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
PRKCZ-223ENST00000497183 ABCC9O60706 1549 aa17.47■□□□□ 0.39
PRKCZ-223ENST00000497183 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
PRKCZ-223ENST00000497183 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
PRKCZ-223ENST00000497183 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
PRKCZ-223ENST00000497183 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
PRKCZ-223ENST00000497183 NACADO15069 1562 aa16.42■□□□□ 0.22
PRKCZ-223ENST00000497183 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
PRKCZ-223ENST00000497183 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
PRKCZ-223ENST00000497183 MYO15BQ96JP2 1530 aa16.15■□□□□ 0.18
PRKCZ-223ENST00000497183 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRKCZ-223ENST00000497183 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
PRKCZ-223ENST00000497183 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
PRKCZ-223ENST00000497183 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
PRKCZ-223ENST00000497183 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
PRKCZ-223ENST00000497183 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
PRKCZ-223ENST00000497183 SCRIBQ14160 1630 aa15.77■□□□□ 0.12
PRKCZ-223ENST00000497183 EIF4G1Q04637 1599 aaKnown RBP15.77■□□□□ 0.11
PRKCZ-223ENST00000497183 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
PRKCZ-223ENST00000497183 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
PRKCZ-223ENST00000497183 CUX2O14529 1486 aa15.17■□□□□ 0.02
PRKCZ-223ENST00000497183 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
PRKCZ-223ENST00000497183 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
PRKCZ-223ENST00000497183 HMGXB3Q12766 1538 aa15.07■□□□□ 0
PRKCZ-223ENST00000497183 SMARCA4P51532 1647 aa15.06■□□□□ 0
PRKCZ-223ENST00000497183 ERCC6Q03468 1493 aa15.02■□□□□ -0
PRKCZ-223ENST00000497183 NESP48681 1621 aa15.01□□□□□ -0.01
PRKCZ-223ENST00000497183 SMARCA2P51531 1590 aa15□□□□□ -0.01
PRKCZ-223ENST00000497183 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
PRKCZ-223ENST00000497183 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
PRKCZ-223ENST00000497183 KIF21AQ7Z4S6 1674 aa14.91□□□□□ -0.02
PRKCZ-223ENST00000497183 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
PRKCZ-223ENST00000497183 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
PRKCZ-223ENST00000497183 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
PRKCZ-223ENST00000497183 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
PRKCZ-223ENST00000497183 WDR62O43379 1518 aa14.67□□□□□ -0.06
PRKCZ-223ENST00000497183 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
PRKCZ-223ENST00000497183 WIZO95785 1651 aa14.65□□□□□ -0.06
PRKCZ-223ENST00000497183 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
PRKCZ-223ENST00000497183 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
PRKCZ-223ENST00000497183 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
PRKCZ-223ENST00000497183 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
PRKCZ-223ENST00000497183 PRDM2Q13029 1718 aa14.48□□□□□ -0.09
PRKCZ-223ENST00000497183 FANCD2Q9BXW9 1451 aa14.48□□□□□ -0.09
PRKCZ-223ENST00000497183 CFTRP13569 1480 aa14.46□□□□□ -0.09
PRKCZ-223ENST00000497183 URB2Q14146 1524 aaKnown RBP14.45□□□□□ -0.1
PRKCZ-223ENST00000497183 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
PRKCZ-223ENST00000497183 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
PRKCZ-223ENST00000497183 RIMBP3CA6NJZ7 1639 aa14.36□□□□□ -0.11
PRKCZ-223ENST00000497183 RIMBP3BA6NNM3 1639 aa14.36□□□□□ -0.11
PRKCZ-223ENST00000497183 RIMBP3Q9UFD9 1639 aa14.36□□□□□ -0.11
PRKCZ-223ENST00000497183 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
PRKCZ-223ENST00000497183 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
PRKCZ-223ENST00000497183 EIF4G3O43432 1585 aaKnown RBP14.25□□□□□ -0.13
PRKCZ-223ENST00000497183 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
PRKCZ-223ENST00000497183 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
PRKCZ-223ENST00000497183 CHD1O14646 1710 aa14.23□□□□□ -0.13
PRKCZ-223ENST00000497183 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
PRKCZ-223ENST00000497183 IFT140Q96RY7 1462 aa14.21□□□□□ -0.13
PRKCZ-223ENST00000497183 CCDC88BA6NC98 1476 aa14.2□□□□□ -0.14
PRKCZ-223ENST00000497183 TARBP1Q13395 1621 aaKnown RBP14.2□□□□□ -0.14
PRKCZ-223ENST00000497183 ILDR1Q86SU0 546 aaPredicted RBP14.16□□□□□ -0.14
PRKCZ-223ENST00000497183 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
PRKCZ-223ENST00000497183 ARAP1Q96P48 1450 aa14.1□□□□□ -0.15
PRKCZ-223ENST00000497183 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
PRKCZ-223ENST00000497183 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
PRKCZ-223ENST00000497183 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
PRKCZ-223ENST00000497183 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
PRKCZ-223ENST00000497183 CLASP1Q7Z460 1538 aa14.03□□□□□ -0.16
PRKCZ-223ENST00000497183 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
PRKCZ-223ENST00000497183 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
PRKCZ-223ENST00000497183 SNAPC4Q5SXM2 1469 aa13.93□□□□□ -0.18
PRKCZ-223ENST00000497183 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
PRKCZ-223ENST00000497183 CUX1P39880 1505 aa13.93□□□□□ -0.18
PRKCZ-223ENST00000497183 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
PRKCZ-223ENST00000497183 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
PRKCZ-223ENST00000497183 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
PRKCZ-223ENST00000497183 SOGA1O94964 1423 aa13.89□□□□□ -0.19
PRKCZ-223ENST00000497183 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
PRKCZ-223ENST00000497183 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
PRKCZ-223ENST00000497183 SYNJ2O15056 1496 aa13.84□□□□□ -0.19
PRKCZ-223ENST00000497183 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
PRKCZ-223ENST00000497183 FBLN2P98095 1184 aa13.83□□□□□ -0.2
PRKCZ-223ENST00000497183 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
PRKCZ-223ENST00000497183 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
PRKCZ-223ENST00000497183 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
PRKCZ-223ENST00000497183 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
PRKCZ-223ENST00000497183 CEP170Q5SW79 1584 aa13.74□□□□□ -0.21
PRKCZ-223ENST00000497183 KIF13AQ9H1H9 1805 aa13.74□□□□□ -0.21
PRKCZ-223ENST00000497183 ADAMTS12P58397 1594 aa13.73□□□□□ -0.21
PRKCZ-223ENST00000497183 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
PRKCZ-223ENST00000497183 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
PRKCZ-223ENST00000497183 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
PRKCZ-223ENST00000497183 NUP160Q12769 1436 aa13.68□□□□□ -0.22
PRKCZ-223ENST00000497183 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
PRKCZ-223ENST00000497183 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
PRKCZ-223ENST00000497183 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
PRKCZ-223ENST00000497183 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
PRKCZ-223ENST00000497183 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
PRKCZ-223ENST00000497183 KDM4FA0A1W2PPD8 638 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms