RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	ARHGEF5	Q12774	1597 aa		24.7	■■□□□ 1.54
PRKCZ-222	ENST00000496325	PTPRK	Q15262	1439 aa		24.69	■■□□□ 1.54
PRKCZ-222	ENST00000496325	PKD2	Q13563	968 aa		24.68	■■□□□ 1.54
PRKCZ-222	ENST00000496325	CCDC141	Q6ZP82	1450 aa		24.68	■■□□□ 1.54
PRKCZ-222	ENST00000496325	PTPN23	Q9H3S7	1636 aa		24.68	■■□□□ 1.54
PRKCZ-222	ENST00000496325	SCAF1	Q9H7N4	1312 aa	Known RBP	24.67	■■□□□ 1.54
PRKCZ-222	ENST00000496325	PIP4K2B	P78356	416 aa		24.67	■■□□□ 1.54
PRKCZ-222	ENST00000496325	ADGB	Q8N7X0	1667 aa		24.66	■■□□□ 1.54
PRKCZ-222	ENST00000496325	PPP6R1	Q9UPN7	881 aa		24.64	■■□□□ 1.54
PRKCZ-222	ENST00000496325	PLXNC1	O60486	1568 aa		24.63	■■□□□ 1.53
PRKCZ-222	ENST00000496325	RSPH4A	Q5TD94	716 aa		24.63	■■□□□ 1.53
PRKCZ-222	ENST00000496325	RTEL1-TNFRSF6B	F6WH68	1400 aa		24.62	■■□□□ 1.53
PRKCZ-222	ENST00000496325	FGD6	Q6ZV73	1430 aa		24.61	■■□□□ 1.53
PRKCZ-222	ENST00000496325	PPARGC1B	Q86YN6	1023 aa	Known RBP	24.61	■■□□□ 1.53
PRKCZ-222	ENST00000496325	DNMT1	P26358	1616 aa	Known RBP	24.6	■■□□□ 1.53
PRKCZ-222	ENST00000496325	A2M	P01023	1474 aa		24.59	■■□□□ 1.53
PRKCZ-222	ENST00000496325	CROCC2	H7BZ55	1655 aa		24.59	■■□□□ 1.53
PRKCZ-222	ENST00000496325	GGT6	Q6P531	493 aa		24.58	■■□□□ 1.53
PRKCZ-222	ENST00000496325	NEURL4	Q96JN8	1562 aa		24.58	■■□□□ 1.52
PRKCZ-222	ENST00000496325	MAST1	Q9Y2H9	1570 aa		24.57	■■□□□ 1.52
PRKCZ-222	ENST00000496325	POLR1A	O95602	1720 aa	Predicted RBP	24.57	■■□□□ 1.52
PRKCZ-222	ENST00000496325	ALK	Q9UM73	1620 aa		24.56	■■□□□ 1.52
PRKCZ-222	ENST00000496325	TSPY4	P0CV99	314 aa		24.55	■■□□□ 1.52
PRKCZ-222	ENST00000496325	TSPY10	P0CW01	314 aa		24.55	■■□□□ 1.52
PRKCZ-222	ENST00000496325	A2ML1	A8K2U0	1454 aa		24.55	■■□□□ 1.52
PRKCZ-222	ENST00000496325	ABCC5	O15440	1437 aa		24.52	■■□□□ 1.52
PRKCZ-222	ENST00000496325	SHANK2	Q9UPX8	1470 aa		24.51	■■□□□ 1.51
PRKCZ-222	ENST00000496325	CPS1	P31327	1500 aa		24.51	■■□□□ 1.51
PRKCZ-222	ENST00000496325	TOM1	O60784	492 aa		24.51	■■□□□ 1.51
PRKCZ-222	ENST00000496325	DHX29	Q7Z478	1369 aa	Known RBP	24.5	■■□□□ 1.51
PRKCZ-222	ENST00000496325	DAPK1	P53355	1430 aa		24.49	■■□□□ 1.51
PRKCZ-222	ENST00000496325	VWDE	Q8N2E2	1590 aa		24.48	■■□□□ 1.51
PRKCZ-222	ENST00000496325	SENP3	Q9H4L4	574 aa	Predicted RBP	24.48	■■□□□ 1.51
PRKCZ-222	ENST00000496325	FBXO31	Q5XUX0	539 aa	Predicted RBP	24.47	■■□□□ 1.51
PRKCZ-222	ENST00000496325	PHF23	Q9BUL5	403 aa	Predicted RBP	24.47	■■□□□ 1.51
PRKCZ-222	ENST00000496325	FAM50A	Q14320	339 aa	Known RBP	24.45	■■□□□ 1.5
PRKCZ-222	ENST00000496325	STRCP1	A6NGW2	1772 aa		24.42	■■□□□ 1.5
PRKCZ-222	ENST00000496325	KIF3B	O15066	747 aa		24.41	■■□□□ 1.5
PRKCZ-222	ENST00000496325	TNR	Q92752	1358 aa		24.41	■■□□□ 1.5
PRKCZ-222	ENST00000496325	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	24.41	■■□□□ 1.5
PRKCZ-222	ENST00000496325	CHIC2	Q9UKJ5	165 aa		24.39	■■□□□ 1.49
PRKCZ-222	ENST00000496325	DUOX2	Q9NRD8	1548 aa		24.37	■■□□□ 1.49
PRKCZ-222	ENST00000496325	EIF2AK4	Q9P2K8	1649 aa	Known RBP	24.37	■■□□□ 1.49
PRKCZ-222	ENST00000496325	RRP7BP	Q9NSQ0	103 aa		24.36	■■□□□ 1.49
PRKCZ-222	ENST00000496325	RGS17	Q9UGC6	210 aa	Predicted RBP	24.35	■■□□□ 1.49
PRKCZ-222	ENST00000496325	RNF17	Q9BXT8	1623 aa	Known RBP	24.35	■■□□□ 1.49
PRKCZ-222	ENST00000496325	KIF15	Q9NS87	1388 aa		24.34	■■□□□ 1.49
PRKCZ-222	ENST00000496325	PZP	P20742	1482 aa		24.33	■■□□□ 1.49
PRKCZ-222	ENST00000496325	ANKLE2	Q86XL3	938 aa		24.33	■■□□□ 1.49
PRKCZ-222	ENST00000496325	NPHP4	O75161	1426 aa	Predicted RBP	24.33	■■□□□ 1.49
PRKCZ-222	ENST00000496325	DEPDC5	O75140	1603 aa		24.32	■■□□□ 1.48
PRKCZ-222	ENST00000496325	IQGAP1	P46940	1657 aa		24.31	■■□□□ 1.48
PRKCZ-222	ENST00000496325	MROH1	Q8NDA8	1641 aa		24.31	■■□□□ 1.48
PRKCZ-222	ENST00000496325	MED14	O60244	1454 aa		24.31	■■□□□ 1.48
PRKCZ-222	ENST00000496325	ADGRL2	O95490	1459 aa		24.31	■■□□□ 1.48
PRKCZ-222	ENST00000496325	LRRC7	Q96NW7	1537 aa		24.3	■■□□□ 1.48
PRKCZ-222	ENST00000496325	ANKRD30A	Q9BXX3	1397 aa		24.3	■■□□□ 1.48
PRKCZ-222	ENST00000496325	CFAP65	Q6ZU64	1925 aa	Known RBP	24.3	■■□□□ 1.48
PRKCZ-222	ENST00000496325	KDM5D	Q9BY66	1539 aa		24.3	■■□□□ 1.48
PRKCZ-222	ENST00000496325	UGGT1	Q9NYU2	1555 aa		24.29	■■□□□ 1.48
PRKCZ-222	ENST00000496325	CEP152	O94986	1710 aa		24.29	■■□□□ 1.48
PRKCZ-222	ENST00000496325	ERBIN	Q96RT1	1412 aa		24.27	■■□□□ 1.48
PRKCZ-222	ENST00000496325	THEMIS	Q8N1K5	641 aa	Predicted RBP	24.26	■■□□□ 1.47
PRKCZ-222	ENST00000496325	RRBP1	Q9P2E9	1410 aa	Known RBP	24.26	■■□□□ 1.47
PRKCZ-222	ENST00000496325	ITGAE	P38570	1179 aa		24.24	■■□□□ 1.47
PRKCZ-222	ENST00000496325	WASHC2C	Q9Y4E1	1318 aa		24.24	■■□□□ 1.47
PRKCZ-222	ENST00000496325	NLRP1	Q9C000	1473 aa		24.24	■■□□□ 1.47
PRKCZ-222	ENST00000496325	FAM135A	Q9P2D6	1515 aa		24.24	■■□□□ 1.47
PRKCZ-222	ENST00000496325	ZC3H13	Q5T200	1668 aa	Known RBP	24.24	■■□□□ 1.47
PRKCZ-222	ENST00000496325	SYNM	O15061	1565 aa		24.21	■■□□□ 1.47
PRKCZ-222	ENST00000496325	ABCC3	O15438	1527 aa		24.21	■■□□□ 1.47
PRKCZ-222	ENST00000496325	XIRP1	Q702N8	1843 aa	Known RBP	24.21	■■□□□ 1.47
PRKCZ-222	ENST00000496325	PRDM15	P57071	1507 aa	Predicted RBP	24.2	■■□□□ 1.46
PRKCZ-222	ENST00000496325	ROCK1	Q13464	1354 aa		24.16	■■□□□ 1.46
PRKCZ-222	ENST00000496325	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	24.16	■■□□□ 1.46	2e-7	■■□□□ 13.4
PRKCZ-222	ENST00000496325	POTEA	Q6S8J7	498 aa		24.15	■■□□□ 1.46
PRKCZ-222	ENST00000496325	ANKRD50	Q9ULJ7	1429 aa		24.15	■■□□□ 1.46
PRKCZ-222	ENST00000496325	SETD1A	O15047	1707 aa	Known RBP	24.11	■■□□□ 1.45
PRKCZ-222	ENST00000496325	UBR1	Q8IWV7	1749 aa		24.1	■■□□□ 1.45
PRKCZ-222	ENST00000496325	ERVK-7	P63135	1459 aa		24.07	■■□□□ 1.44
PRKCZ-222	ENST00000496325	KANK1	Q14678	1352 aa		24.07	■■□□□ 1.44
PRKCZ-222	ENST00000496325	UNC13B	O14795	1591 aa		24.07	■■□□□ 1.44
PRKCZ-222	ENST00000496325	LTK	P29376	864 aa		24.06	■■□□□ 1.44
PRKCZ-222	ENST00000496325	LMTK2	Q8IWU2	1503 aa		24.05	■■□□□ 1.44
PRKCZ-222	ENST00000496325	SCAF11	Q99590	1463 aa	Known RBP	24.04	■■□□□ 1.44
PRKCZ-222	ENST00000496325	GCC2	Q8IWJ2	1684 aa		24.04	■■□□□ 1.44
PRKCZ-222	ENST00000496325	ARHGAP31	Q2M1Z3	1444 aa		24.02	■■□□□ 1.44
PRKCZ-222	ENST00000496325	TET3	O43151	1660 aa		23.99	■■□□□ 1.43
PRKCZ-222	ENST00000496325	FAM135B	Q49AJ0	1406 aa		23.99	■■□□□ 1.43
PRKCZ-222	ENST00000496325	ARHGAP23	Q9P227	1491 aa		23.99	■■□□□ 1.43
PRKCZ-222	ENST00000496325	EFCAB6	Q5THR3	1501 aa		23.99	■■□□□ 1.43
PRKCZ-222	ENST00000496325	ROBO1	Q9Y6N7	1651 aa		23.99	■■□□□ 1.43
PRKCZ-222	ENST00000496325	NAIP	Q13075	1403 aa		23.98	■■□□□ 1.43
PRKCZ-222	ENST00000496325	IQGAP3	Q86VI3	1631 aa		23.98	■■□□□ 1.43
PRKCZ-222	ENST00000496325	TXNDC2	Q86VQ3	553 aa		23.97	■■□□□ 1.43
PRKCZ-222	ENST00000496325	SLIT1	O75093	1534 aa		23.96	■■□□□ 1.43
PRKCZ-222	ENST00000496325	RBM33	Q96EV2	1170 aa	Known RBP	23.95	■■□□□ 1.42
PRKCZ-222	ENST00000496325		E9PCH4	1651 aa		23.95	■■□□□ 1.42
PRKCZ-222	ENST00000496325	TMEM94	Q12767	1356 aa		23.92	■■□□□ 1.42
PRKCZ-222	ENST00000496325	NUP155	O75694	1391 aa		23.91	■■□□□ 1.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms