RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
APTX-233ENST00000496030 RSPH4AQ5TD94 716 aa18.33■□□□□ 0.52
APTX-233ENST00000496030 CCDC141Q6ZP82 1450 aa18.32■□□□□ 0.52
APTX-233ENST00000496030 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
APTX-233ENST00000496030 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
APTX-233ENST00000496030 PIP4K2BP78356 416 aa18.31■□□□□ 0.52
APTX-233ENST00000496030 PKD2Q13563 968 aa18.31■□□□□ 0.52
APTX-233ENST00000496030 ABCC5O15440 1437 aa18.3■□□□□ 0.52
APTX-233ENST00000496030 INO80Q9ULG1 1556 aaPredicted RBP18.3■□□□□ 0.52
APTX-233ENST00000496030 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
APTX-233ENST00000496030 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
APTX-233ENST00000496030 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
APTX-233ENST00000496030 RRBP1Q9P2E9 1410 aaKnown RBP18.28■□□□□ 0.52
APTX-233ENST00000496030 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
APTX-233ENST00000496030 FAM50AQ14320 339 aaKnown RBP18.27■□□□□ 0.52
APTX-233ENST00000496030 DNMT1P26358 1616 aaKnown RBP18.27■□□□□ 0.51
APTX-233ENST00000496030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.51
APTX-233ENST00000496030 DAPK1P53355 1430 aa18.25■□□□□ 0.51
APTX-233ENST00000496030 MAST1Q9Y2H9 1570 aa18.25■□□□□ 0.51
APTX-233ENST00000496030 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
APTX-233ENST00000496030 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
APTX-233ENST00000496030 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
APTX-233ENST00000496030 PLXNC1O60486 1568 aa18.23■□□□□ 0.51
APTX-233ENST00000496030 CROCC2H7BZ55 1655 aa18.22■□□□□ 0.51
APTX-233ENST00000496030 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
APTX-233ENST00000496030 POLR1AO95602 1720 aaPredicted RBP18.22■□□□□ 0.51
APTX-233ENST00000496030 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
APTX-233ENST00000496030 TOM1O60784 492 aa18.21■□□□□ 0.51
APTX-233ENST00000496030 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
APTX-233ENST00000496030 CPS1P31327 1500 aa18.21■□□□□ 0.51
APTX-233ENST00000496030 A2ML1A8K2U0 1454 aa18.2■□□□□ 0.5
APTX-233ENST00000496030 A2MP01023 1474 aa18.18■□□□□ 0.5
APTX-233ENST00000496030 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
APTX-233ENST00000496030 GGT6Q6P531 493 aa18.17■□□□□ 0.5
APTX-233ENST00000496030 CHIC2Q9UKJ5 165 aa18.17■□□□□ 0.5
APTX-233ENST00000496030 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
APTX-233ENST00000496030 VWDEQ8N2E2 1590 aa18.16■□□□□ 0.5
APTX-233ENST00000496030 ADGRL2O95490 1459 aa18.14■□□□□ 0.5
APTX-233ENST00000496030 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
APTX-233ENST00000496030 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
APTX-233ENST00000496030 ITGAEP38570 1179 aa18.12■□□□□ 0.49
APTX-233ENST00000496030 ANKRD30AQ9BXX3 1397 aa18.12■□□□□ 0.49
APTX-233ENST00000496030 KIF15Q9NS87 1388 aa18.11■□□□□ 0.49
APTX-233ENST00000496030 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
APTX-233ENST00000496030 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
APTX-233ENST00000496030 RGS17Q9UGC6 210 aaPredicted RBP18.1■□□□□ 0.49
APTX-233ENST00000496030 DUOX2Q9NRD8 1548 aa18.09■□□□□ 0.49
APTX-233ENST00000496030 FBXO31Q5XUX0 539 aaPredicted RBP18.09■□□□□ 0.49
APTX-233ENST00000496030 TNRQ92752 1358 aa18.07■□□□□ 0.48
APTX-233ENST00000496030 KIF3BO15066 747 aa18.06■□□□□ 0.48
APTX-233ENST00000496030 DEPDC5O75140 1603 aa18.04■□□□□ 0.48
APTX-233ENST00000496030 NPHP4O75161 1426 aaPredicted RBP18.04■□□□□ 0.48
APTX-233ENST00000496030 ERBINQ96RT1 1412 aa18.04■□□□□ 0.48
APTX-233ENST00000496030 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
APTX-233ENST00000496030 MED14O60244 1454 aa18.03■□□□□ 0.48
APTX-233ENST00000496030 ANKLE2Q86XL3 938 aa18.03■□□□□ 0.48
APTX-233ENST00000496030 PZPP20742 1482 aa18.02■□□□□ 0.48
APTX-233ENST00000496030 RNF17Q9BXT8 1623 aaKnown RBP18.02■□□□□ 0.48
APTX-233ENST00000496030 EIF2AK4Q9P2K8 1649 aaKnown RBP18.02■□□□□ 0.48
APTX-233ENST00000496030 IQGAP1P46940 1657 aa18.02■□□□□ 0.47
APTX-233ENST00000496030 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
APTX-233ENST00000496030 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
APTX-233ENST00000496030 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
APTX-233ENST00000496030 NAIPQ13075 1403 aa17.99■□□□□ 0.47
APTX-233ENST00000496030 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
APTX-233ENST00000496030 SYNMO15061 1565 aa17.98■□□□□ 0.47
APTX-233ENST00000496030 THEMISQ8N1K5 641 aaPredicted RBP17.97■□□□□ 0.47
APTX-233ENST00000496030 HFM1A2PYH4 1435 aa17.97■□□□□ 0.47
APTX-233ENST00000496030 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
APTX-233ENST00000496030 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
APTX-233ENST00000496030 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
APTX-233ENST00000496030 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
APTX-233ENST00000496030 XIRP1Q702N8 1843 aaKnown RBP17.94■□□□□ 0.46
APTX-233ENST00000496030 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
APTX-233ENST00000496030 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
APTX-233ENST00000496030 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
APTX-233ENST00000496030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
APTX-233ENST00000496030 ABCC3O15438 1527 aa17.91■□□□□ 0.46
APTX-233ENST00000496030 WASHC2CQ9Y4E1 1318 aa17.91■□□□□ 0.46
APTX-233ENST00000496030 UNC13BO14795 1591 aa17.9■□□□□ 0.46
APTX-233ENST00000496030 CEP152O94986 1710 aa17.87■□□□□ 0.45
APTX-233ENST00000496030 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
APTX-233ENST00000496030 LMTK2Q8IWU2 1503 aa17.86■□□□□ 0.45
APTX-233ENST00000496030 KANK1Q14678 1352 aa17.85■□□□□ 0.45
APTX-233ENST00000496030 UBR1Q8IWV7 1749 aa17.84■□□□□ 0.45
APTX-233ENST00000496030 NUP155O75694 1391 aa17.84■□□□□ 0.45
APTX-233ENST00000496030 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
APTX-233ENST00000496030 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
APTX-233ENST00000496030 ARHGAP31Q2M1Z3 1444 aa17.82■□□□□ 0.44
APTX-233ENST00000496030 IQGAP3Q86VI3 1631 aa17.82■□□□□ 0.44
APTX-233ENST00000496030 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
APTX-233ENST00000496030 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
APTX-233ENST00000496030 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
APTX-233ENST00000496030 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
APTX-233ENST00000496030 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
APTX-233ENST00000496030 LTKP29376 864 aa17.79■□□□□ 0.44
APTX-233ENST00000496030 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
APTX-233ENST00000496030 TET3O43151 1660 aa17.78■□□□□ 0.44
APTX-233ENST00000496030 HRCP23327 699 aa17.77■□□□□ 0.44
APTX-233ENST00000496030 ARHGAP23Q9P227 1491 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms