RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 EIF2AK4Q9P2K8 1649 aaKnown RBP37.71■■■■□ 3.63
HLA-C-209ENST00000495835 WASHC2CQ9Y4E1 1318 aa37.69■■■■□ 3.62
HLA-C-209ENST00000495835 ABCC5O15440 1437 aa37.69■■■■□ 3.62
HLA-C-209ENST00000495835 CROCC2H7BZ55 1655 aa37.68■■■■□ 3.62
HLA-C-209ENST00000495835 RNF17Q9BXT8 1623 aaKnown RBP37.67■■■■□ 3.62
HLA-C-209ENST00000495835 DUOX2Q9NRD8 1548 aa37.66■■■■□ 3.62
HLA-C-209ENST00000495835 DNMT1P26358 1616 aaKnown RBP37.65■■■■□ 3.62
HLA-C-209ENST00000495835 ZNF142P52746 1687 aaPredicted RBP37.64■■■■□ 3.62
HLA-C-209ENST00000495835 DAPK1P53355 1430 aa37.63■■■■□ 3.61
HLA-C-209ENST00000495835 MYO3AQ8NEV4 1616 aa37.63■■■■□ 3.61
HLA-C-209ENST00000495835 PZPP20742 1482 aa37.62■■■■□ 3.61
HLA-C-209ENST00000495835 PTPRTO14522 1441 aa37.61■■■■□ 3.61
HLA-C-209ENST00000495835 NCOA1Q15788 1441 aa37.6■■■■□ 3.61
HLA-C-209ENST00000495835 FBXO41Q8TF61 875 aa37.59■■■■□ 3.61
HLA-C-209ENST00000495835 ZC3H13Q5T200 1668 aaKnown RBP37.58■■■■□ 3.61
HLA-C-209ENST00000495835 CEP170BQ9Y4F5 1589 aaPredicted RBP37.58■■■■□ 3.61
HLA-C-209ENST00000495835 KIF15Q9NS87 1388 aa37.56■■■■□ 3.6
HLA-C-209ENST00000495835 CAMSAP1Q5T5Y3 1602 aa37.56■■■■□ 3.6
HLA-C-209ENST00000495835 ERBINQ96RT1 1412 aa37.55■■■■□ 3.6
HLA-C-209ENST00000495835 PLA2R1Q13018 1463 aa37.52■■■■□ 3.6
HLA-C-209ENST00000495835 A2ML1A8K2U0 1454 aa37.52■■■■□ 3.6
HLA-C-209ENST00000495835 TNRQ92752 1358 aa37.51■■■■□ 3.59
HLA-C-209ENST00000495835 RRP7BPQ9NSQ0 103 aa37.5■■■■□ 3.59
HLA-C-209ENST00000495835 ANKRD30AQ9BXX3 1397 aa37.5■■■■□ 3.59
HLA-C-209ENST00000495835 ABCC3O15438 1527 aa37.5■■■■□ 3.59
HLA-C-209ENST00000495835 MROH1Q8NDA8 1641 aa37.5■■■■□ 3.59
HLA-C-209ENST00000495835 FBXO31Q5XUX0 539 aaPredicted RBP37.49■■■■□ 3.59
HLA-C-209ENST00000495835 PKD2Q13563 968 aa37.47■■■■□ 3.59
HLA-C-209ENST00000495835 CERKQ8TCT0 537 aa37.47■■■■□ 3.59
HLA-C-209ENST00000495835 PRDM15P57071 1507 aaPredicted RBP37.42■■■■□ 3.58
HLA-C-209ENST00000495835 ADGRL2O95490 1459 aa37.42■■■■□ 3.58
HLA-C-209ENST00000495835 NLRP1Q9C000 1473 aa37.42■■■■□ 3.58
HLA-C-209ENST00000495835 FAM50AQ14320 339 aaKnown RBP37.41■■■■□ 3.58
HLA-C-209ENST00000495835 CHIC2Q9UKJ5 165 aa37.4■■■■□ 3.58
HLA-C-209ENST00000495835 DEPDC5O75140 1603 aa37.39■■■■□ 3.58
HLA-C-209ENST00000495835 CEP152O94986 1710 aa37.37■■■■□ 3.57
HLA-C-209ENST00000495835 SPATA31D1Q6ZQQ2 1576 aa37.37■■■■□ 3.57
HLA-C-209ENST00000495835 NCKAP5LQ9HCH0 1330 aa37.36■■■■□ 3.57
HLA-C-209ENST00000495835 ARHGAP31Q2M1Z3 1444 aa37.35■■■■□ 3.57
HLA-C-209ENST00000495835 KANK1Q14678 1352 aa37.33■■■■□ 3.57
HLA-C-209ENST00000495835 THEMISQ8N1K5 641 aaPredicted RBP37.33■■■■□ 3.57
HLA-C-209ENST00000495835 ERVK-7P63135 1459 aa37.31■■■■□ 3.56
HLA-C-209ENST00000495835 UGGT1Q9NYU2 1555 aa37.28■■■■□ 3.56
HLA-C-209ENST00000495835 LTBP4Q8N2S1 1624 aa37.25■■■■□ 3.55
HLA-C-209ENST00000495835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.25■■■■□ 3.55
HLA-C-209ENST00000495835 LMTK2Q8IWU2 1503 aa37.25■■■■□ 3.55
HLA-C-209ENST00000495835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.24■■■■□ 3.55
HLA-C-209ENST00000495835 VWDEQ8N2E2 1590 aa37.24■■■■□ 3.55
HLA-C-209ENST00000495835 POLR1AO95602 1720 aaPredicted RBP37.23■■■■□ 3.55
HLA-C-209ENST00000495835 CFAP65Q6ZU64 1925 aaKnown RBP37.22■■■■□ 3.55
HLA-C-209ENST00000495835 ANKLE2Q86XL3 938 aa37.21■■■■□ 3.55
HLA-C-209ENST00000495835 ANKRD50Q9ULJ7 1429 aa37.2■■■■□ 3.55
HLA-C-209ENST00000495835 IQSEC2Q5JU85 1478 aa37.2■■■■□ 3.54
HLA-C-209ENST00000495835 ROCK1Q13464 1354 aa37.18■■■■□ 3.54
HLA-C-209ENST00000495835 NEURL4Q96JN8 1562 aa37.13■■■■□ 3.53
HLA-C-209ENST00000495835 MED14O60244 1454 aa37.13■■■■□ 3.53
HLA-C-209ENST00000495835 UBR1Q8IWV7 1749 aa37.09■■■■□ 3.53
HLA-C-209ENST00000495835 ZNF335Q9H4Z2 1342 aaPredicted RBP37.09■■■■□ 3.53
HLA-C-209ENST00000495835 PPARGC1BQ86YN6 1023 aaKnown RBP37.07■■■■□ 3.52
HLA-C-209ENST00000495835 EFCAB6Q5THR3 1501 aa37.06■■■■□ 3.52
HLA-C-209ENST00000495835 NPHP4O75161 1426 aaPredicted RBP37.03■■■■□ 3.52
HLA-C-209ENST00000495835 RPRD2Q5VT52 1461 aaKnown RBP37.03■■■■□ 3.52
HLA-C-209ENST00000495835 KDM5AP29375 1690 aaKnown RBP37.02■■■■□ 3.52
HLA-C-209ENST00000495835 NOS1P29475 1434 aa37.01■■■■□ 3.51
HLA-C-209ENST00000495835 UNC13BO14795 1591 aa37■■■■□ 3.51
HLA-C-209ENST00000495835 SLIT1O75093 1534 aa36.99■■■■□ 3.51
HLA-C-209ENST00000495835 RRBP1Q9P2E9 1410 aaKnown RBP36.98■■■■□ 3.51
HLA-C-209ENST00000495835 ARHGAP23Q9P227 1491 aa36.98■■■■□ 3.51
HLA-C-209ENST00000495835 TET3O43151 1660 aa36.97■■■■□ 3.51
HLA-C-209ENST00000495835 IQGAP1P46940 1657 aa36.97■■■■□ 3.51
HLA-C-209ENST00000495835 PIK3C2BO00750 1634 aa36.96■■■■□ 3.51
HLA-C-209ENST00000495835 SLC52A1Q9NWF4 448 aa36.95■■■■□ 3.51
HLA-C-209ENST00000495835 CPS1P31327 1500 aa36.94■■■■□ 3.5
HLA-C-209ENST00000495835 SYNMO15061 1565 aa36.93■■■■□ 3.5
HLA-C-209ENST00000495835 ITGAEP38570 1179 aa36.93■■■■□ 3.5
HLA-C-209ENST00000495835 IDI1Q13907 227 aa36.93■■■■□ 3.5
HLA-C-209ENST00000495835 GCC2Q8IWJ2 1684 aa36.93■■■■□ 3.5
HLA-C-209ENST00000495835 SCAF11Q99590 1463 aaKnown RBP36.92■■■■□ 3.5
HLA-C-209ENST00000495835 STAG3Q9UJ98 1225 aa36.91■■■■□ 3.5
HLA-C-209ENST00000495835 EID1Q9Y6B2 187 aa36.9■■■■□ 3.5
HLA-C-209ENST00000495835 TXNDC2Q86VQ3 553 aa36.88■■■■□ 3.49
HLA-C-209ENST00000495835 TMEM2Q9UHN6 1383 aa36.88■■■■□ 3.49
HLA-C-209ENST00000495835 IQGAP3Q86VI3 1631 aa36.87■■■■□ 3.49
HLA-C-209ENST00000495835 LTKP29376 864 aa36.85■■■■□ 3.49
HLA-C-209ENST00000495835 ADGRB3O60242 1522 aa36.8■■■■□ 3.48
HLA-C-209ENST00000495835 NUP155O75694 1391 aa36.8■■■■□ 3.48
HLA-C-209ENST00000495835 E9PCH4 1651 aa36.77■■■■□ 3.48
HLA-C-209ENST00000495835 UBAP1LF5GYI3 381 aa36.75■■■■□ 3.47
HLA-C-209ENST00000495835 HDGFP51858 240 aaKnown RBP36.69■■■■□ 3.46
HLA-C-209ENST00000495835 STRCP1A6NGW2 1772 aa36.68■■■■□ 3.46
HLA-C-209ENST00000495835 NAIPQ13075 1403 aa36.68■■■■□ 3.46
HLA-C-209ENST00000495835 TOM1O60784 492 aa36.66■■■■□ 3.46
HLA-C-209ENST00000495835 TMEM131LA2VDJ0 1609 aa36.66■■■■□ 3.46
HLA-C-209ENST00000495835 LRRC7Q96NW7 1537 aa36.63■■■■□ 3.45
HLA-C-209ENST00000495835 MYO5BQ9ULV0 1848 aa36.62■■■■□ 3.45
HLA-C-209ENST00000495835 HFM1A2PYH4 1435 aa36.6■■■■□ 3.45
HLA-C-209ENST00000495835 ZFYVE9O95405 1425 aa36.6■■■■□ 3.45
HLA-C-209ENST00000495835 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.57■■■■□ 3.44
HLA-C-209ENST00000495835 RIMS2Q9UQ26 1411 aa36.56■■■■□ 3.44
HLA-C-209ENST00000495835 PLEKHG1Q9ULL1 1385 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms