RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 APLP2Q06481 763 aa12.16□□□□□ -0.46
PTPRK-214ENST00000495748 LRRC9Q6ZRR7 1453 aa12.15□□□□□ -0.46
PTPRK-214ENST00000495748 ARHGEF5Q12774 1597 aa12.15□□□□□ -0.46
PTPRK-214ENST00000495748 MAP3K1Q13233 1512 aa12.15□□□□□ -0.46
PTPRK-214ENST00000495748 TNRQ92752 1358 aa12.15□□□□□ -0.46
PTPRK-214ENST00000495748 LTBP4Q8N2S1 1624 aa12.15□□□□□ -0.47
PTPRK-214ENST00000495748 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
PTPRK-214ENST00000495748 KDM5DQ9BY66 1539 aa12.14□□□□□ -0.47
PTPRK-214ENST00000495748 PZPP20742 1482 aa12.14□□□□□ -0.47
PTPRK-214ENST00000495748 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
PTPRK-214ENST00000495748 LOC105371045A0A1W2PR82 267 aa12.13□□□□□ -0.47
PTPRK-214ENST00000495748 THEMISQ8N1K5 641 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-214ENST00000495748 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
PTPRK-214ENST00000495748 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-214ENST00000495748 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-214ENST00000495748 MYOM3Q5VTT5 1437 aa12.11□□□□□ -0.47
PTPRK-214ENST00000495748 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
PTPRK-214ENST00000495748 DISP3Q9P2K9 1392 aa12.1□□□□□ -0.47
PTPRK-214ENST00000495748 UBAP1LF5GYI3 381 aa12.1□□□□□ -0.47
PTPRK-214ENST00000495748 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
PTPRK-214ENST00000495748 DNMT1P26358 1616 aaKnown RBP12.09□□□□□ -0.47
PTPRK-214ENST00000495748 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-214ENST00000495748 EIF2AK4Q9P2K8 1649 aaKnown RBP12.06□□□□□ -0.48
PTPRK-214ENST00000495748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
PTPRK-214ENST00000495748 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
PTPRK-214ENST00000495748 RNF17Q9BXT8 1623 aaKnown RBP12.05□□□□□ -0.48
PTPRK-214ENST00000495748 TOM1O60784 492 aa12.05□□□□□ -0.48
PTPRK-214ENST00000495748 ZC3H13Q5T200 1668 aaKnown RBP12.05□□□□□ -0.48
PTPRK-214ENST00000495748 CPS1P31327 1500 aa12.05□□□□□ -0.48
PTPRK-214ENST00000495748 DUOX2Q9NRD8 1548 aa12.05□□□□□ -0.48
PTPRK-214ENST00000495748 NPHP4O75161 1426 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-214ENST00000495748 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-214ENST00000495748 SHANK2Q9UPX8 1470 aa12.03□□□□□ -0.48
PTPRK-214ENST00000495748 ABCC3O15438 1527 aa12.03□□□□□ -0.48
PTPRK-214ENST00000495748 KANK1Q14678 1352 aa12.03□□□□□ -0.48
PTPRK-214ENST00000495748 KIF15Q9NS87 1388 aa12.03□□□□□ -0.48
PTPRK-214ENST00000495748 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-214ENST00000495748 ERBINQ96RT1 1412 aa12.02□□□□□ -0.49
PTPRK-214ENST00000495748 MED14O60244 1454 aa12.02□□□□□ -0.49
PTPRK-214ENST00000495748 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
PTPRK-214ENST00000495748 DEPDC5O75140 1603 aa12.01□□□□□ -0.49
PTPRK-214ENST00000495748 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
PTPRK-214ENST00000495748 NEURL4Q96JN8 1562 aa12.01□□□□□ -0.49
PTPRK-214ENST00000495748 RRP7BPQ9NSQ0 103 aa12□□□□□ -0.49
PTPRK-214ENST00000495748 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
PTPRK-214ENST00000495748 ANKRD30AQ9BXX3 1397 aa12□□□□□ -0.49
PTPRK-214ENST00000495748 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
PTPRK-214ENST00000495748 ABCC5O15440 1437 aa11.99□□□□□ -0.49
PTPRK-214ENST00000495748 PTPN23Q9H3S7 1636 aa11.99□□□□□ -0.49
PTPRK-214ENST00000495748 DAPK1P53355 1430 aa11.98□□□□□ -0.49
PTPRK-214ENST00000495748 FGD6Q6ZV73 1430 aa11.98□□□□□ -0.49
PTPRK-214ENST00000495748 SOCS7O14512 581 aa11.98□□□□□ -0.49
PTPRK-214ENST00000495748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.499e-7■■□□□ 11.9
PTPRK-214ENST00000495748 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
PTPRK-214ENST00000495748 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
PTPRK-214ENST00000495748 PIP4K2BP78356 416 aa11.97□□□□□ -0.49
PTPRK-214ENST00000495748 MROH1Q8NDA8 1641 aa11.97□□□□□ -0.49
PTPRK-214ENST00000495748 ILDR2Q71H61 639 aa11.96□□□□□ -0.49
PTPRK-214ENST00000495748 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.49
PTPRK-214ENST00000495748 PRDM15P57071 1507 aaPredicted RBP11.96□□□□□ -0.5
PTPRK-214ENST00000495748 CEP152O94986 1710 aa11.95□□□□□ -0.5
PTPRK-214ENST00000495748 IQGAP1P46940 1657 aa11.95□□□□□ -0.5
PTPRK-214ENST00000495748 CHIC2Q9UKJ5 165 aa11.95□□□□□ -0.5
PTPRK-214ENST00000495748 VWDEQ8N2E2 1590 aa11.95□□□□□ -0.5
PTPRK-214ENST00000495748 SCAF11Q99590 1463 aaKnown RBP11.95□□□□□ -0.5
PTPRK-214ENST00000495748 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
PTPRK-214ENST00000495748 CFAP65Q6ZU64 1925 aaKnown RBP11.94□□□□□ -0.5
PTPRK-214ENST00000495748 HSPA1LP34931 641 aa11.93□□□□□ -0.5
PTPRK-214ENST00000495748 SLIT1O75093 1534 aa11.92□□□□□ -0.5
PTPRK-214ENST00000495748 ARHGAP23Q9P227 1491 aa11.92□□□□□ -0.5
PTPRK-214ENST00000495748 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
PTPRK-214ENST00000495748 SLC52A1Q9NWF4 448 aa11.92□□□□□ -0.5
PTPRK-214ENST00000495748 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
PTPRK-214ENST00000495748 LMTK2Q8IWU2 1503 aa11.91□□□□□ -0.5
PTPRK-214ENST00000495748 LTKP29376 864 aa11.91□□□□□ -0.5
PTPRK-214ENST00000495748 TMEM2Q9UHN6 1383 aa11.91□□□□□ -0.5
PTPRK-214ENST00000495748 SYNMO15061 1565 aa11.9□□□□□ -0.5
PTPRK-214ENST00000495748 HDGFP51858 240 aaKnown RBP11.9□□□□□ -0.5
PTPRK-214ENST00000495748 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
PTPRK-214ENST00000495748 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
PTPRK-214ENST00000495748 IDI1Q13907 227 aa11.89□□□□□ -0.51
PTPRK-214ENST00000495748 ANKRD50Q9ULJ7 1429 aa11.88□□□□□ -0.51
PTPRK-214ENST00000495748 EFCAB6Q5THR3 1501 aa11.88□□□□□ -0.51
PTPRK-214ENST00000495748 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
PTPRK-214ENST00000495748 NOS1P29475 1434 aa11.86□□□□□ -0.51
PTPRK-214ENST00000495748 PIK3C2BO00750 1634 aa11.86□□□□□ -0.51
PTPRK-214ENST00000495748 KCNA6P17658 529 aa11.86□□□□□ -0.51
PTPRK-214ENST00000495748 BCANQ96GW7 911 aa11.86□□□□□ -0.51
PTPRK-214ENST00000495748 RPRD2Q5VT52 1461 aaKnown RBP11.86□□□□□ -0.51
PTPRK-214ENST00000495748 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
PTPRK-214ENST00000495748 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-214ENST00000495748 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTPRK-214ENST00000495748 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-214ENST00000495748 MED1Q15648 1581 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-214ENST00000495748 ADGRB3O60242 1522 aa11.82□□□□□ -0.52
PTPRK-214ENST00000495748 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-214ENST00000495748 TMEM94Q12767 1356 aa11.81□□□□□ -0.52
PTPRK-214ENST00000495748 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
PTPRK-214ENST00000495748 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
PTPRK-214ENST00000495748 ALKQ9UM73 1620 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms