RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
PTPRK-214ENST00000495748 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
PTPRK-214ENST00000495748 ABCC9O60706 1549 aa17.18■□□□□ 0.34
PTPRK-214ENST00000495748 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
PTPRK-214ENST00000495748 NACADO15069 1562 aa16.3■□□□□ 0.2
PTPRK-214ENST00000495748 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
PTPRK-214ENST00000495748 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
PTPRK-214ENST00000495748 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
PTPRK-214ENST00000495748 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTPRK-214ENST00000495748 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
PTPRK-214ENST00000495748 ZCCHC6Q5VYS8 1495 aaKnown RBP15.87■□□□□ 0.13
PTPRK-214ENST00000495748 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
PTPRK-214ENST00000495748 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.12
PTPRK-214ENST00000495748 SHROOM4Q9ULL8 1493 aa15.77■□□□□ 0.11
PTPRK-214ENST00000495748 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
PTPRK-214ENST00000495748 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
PTPRK-214ENST00000495748 CC2D2AQ9P2K1 1620 aa15.51■□□□□ 0.07
PTPRK-214ENST00000495748 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
PTPRK-214ENST00000495748 NCAPD3P42695 1498 aa15.04■□□□□ -0
PTPRK-214ENST00000495748 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
PTPRK-214ENST00000495748 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
PTPRK-214ENST00000495748 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
PTPRK-214ENST00000495748 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
PTPRK-214ENST00000495748 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
PTPRK-214ENST00000495748 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
PTPRK-214ENST00000495748 CUX2O14529 1486 aa14.88□□□□□ -0.03
PTPRK-214ENST00000495748 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
PTPRK-214ENST00000495748 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
PTPRK-214ENST00000495748 PEG3Q9GZU2 1588 aa14.8□□□□□ -0.04
PTPRK-214ENST00000495748 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
PTPRK-214ENST00000495748 NESP48681 1621 aa14.72□□□□□ -0.05
PTPRK-214ENST00000495748 LAMC3Q9Y6N6 1575 aa14.7□□□□□ -0.06
PTPRK-214ENST00000495748 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
PTPRK-214ENST00000495748 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
PTPRK-214ENST00000495748 THOC2Q8NI27 1593 aaKnown RBP14.58□□□□□ -0.08
PTPRK-214ENST00000495748 WIZO95785 1651 aa14.52□□□□□ -0.08
PTPRK-214ENST00000495748 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.08
PTPRK-214ENST00000495748 MRC2Q9UBG0 1479 aa14.49□□□□□ -0.09
PTPRK-214ENST00000495748 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
PTPRK-214ENST00000495748 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
PTPRK-214ENST00000495748 WDR62O43379 1518 aa14.42□□□□□ -0.1
PTPRK-214ENST00000495748 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
PTPRK-214ENST00000495748 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
PTPRK-214ENST00000495748 CFTRP13569 1480 aa14.4□□□□□ -0.1
PTPRK-214ENST00000495748 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
PTPRK-214ENST00000495748 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
PTPRK-214ENST00000495748 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
PTPRK-214ENST00000495748 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
PTPRK-214ENST00000495748 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
PTPRK-214ENST00000495748 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
PTPRK-214ENST00000495748 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
PTPRK-214ENST00000495748 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-214ENST00000495748 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
PTPRK-214ENST00000495748 DNMBPQ6XZF7 1577 aa14.08□□□□□ -0.16
PTPRK-214ENST00000495748 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-214ENST00000495748 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
PTPRK-214ENST00000495748 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTPRK-214ENST00000495748 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-214ENST00000495748 TARBP1Q13395 1621 aaKnown RBP13.95□□□□□ -0.18
PTPRK-214ENST00000495748 SOGA1O94964 1423 aa13.95□□□□□ -0.18
PTPRK-214ENST00000495748 FBLN2P98095 1184 aa13.94□□□□□ -0.18
PTPRK-214ENST00000495748 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
PTPRK-214ENST00000495748 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
PTPRK-214ENST00000495748 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
PTPRK-214ENST00000495748 ARHGEF11O15085 1522 aa13.92□□□□□ -0.18
PTPRK-214ENST00000495748 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
PTPRK-214ENST00000495748 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
PTPRK-214ENST00000495748 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
PTPRK-214ENST00000495748 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
PTPRK-214ENST00000495748 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
PTPRK-214ENST00000495748 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-214ENST00000495748 CHD1O14646 1710 aa13.86□□□□□ -0.19
PTPRK-214ENST00000495748 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
PTPRK-214ENST00000495748 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-214ENST00000495748 CUX1P39880 1505 aa13.84□□□□□ -0.19
PTPRK-214ENST00000495748 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
PTPRK-214ENST00000495748 SNAPC4Q5SXM2 1469 aa13.82□□□□□ -0.2
PTPRK-214ENST00000495748 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
PTPRK-214ENST00000495748 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
PTPRK-214ENST00000495748 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
PTPRK-214ENST00000495748 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
PTPRK-214ENST00000495748 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
PTPRK-214ENST00000495748 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
PTPRK-214ENST00000495748 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
PTPRK-214ENST00000495748 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
PTPRK-214ENST00000495748 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
PTPRK-214ENST00000495748 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
PTPRK-214ENST00000495748 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
PTPRK-214ENST00000495748 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
PTPRK-214ENST00000495748 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
PTPRK-214ENST00000495748 FHAD1B1AJZ9 1412 aa13.62□□□□□ -0.23
PTPRK-214ENST00000495748 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
PTPRK-214ENST00000495748 ADAMTS12P58397 1594 aa13.58□□□□□ -0.23
PTPRK-214ENST00000495748 NUP160Q12769 1436 aa13.58□□□□□ -0.24
PTPRK-214ENST00000495748 CHIC1Q5VXU3 224 aa13.57□□□□□ -0.24
PTPRK-214ENST00000495748 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
PTPRK-214ENST00000495748 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
PTPRK-214ENST00000495748 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
PTPRK-214ENST00000495748 PRG4Q92954 1404 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-214ENST00000495748 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms