RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 HS3ST6Q96QI5 342 aa16.44■□□□□ 0.22
RAB11FIP3-211ENST00000495663 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
RAB11FIP3-211ENST00000495663 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
RAB11FIP3-211ENST00000495663 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
RAB11FIP3-211ENST00000495663 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
RAB11FIP3-211ENST00000495663 UGGT2Q9NYU1 1516 aa16.41■□□□□ 0.22
RAB11FIP3-211ENST00000495663 HOXB1P14653 301 aaPredicted RBP16.4■□□□□ 0.22
RAB11FIP3-211ENST00000495663 PRG4Q92954 1404 aaPredicted RBP16.39■□□□□ 0.21
RAB11FIP3-211ENST00000495663 RIMBP2O15034 1052 aa16.39■□□□□ 0.21
RAB11FIP3-211ENST00000495663 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
RAB11FIP3-211ENST00000495663 PPP1R37O75864 691 aa16.37■□□□□ 0.21
RAB11FIP3-211ENST00000495663 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
RAB11FIP3-211ENST00000495663 HS6ST3Q8IZP7 471 aa16.37■□□□□ 0.21
RAB11FIP3-211ENST00000495663 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
RAB11FIP3-211ENST00000495663 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
RAB11FIP3-211ENST00000495663 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
RAB11FIP3-211ENST00000495663 DISP1Q96F81 1524 aa16.34■□□□□ 0.21
RAB11FIP3-211ENST00000495663 SAMD9Q5K651 1589 aa16.33■□□□□ 0.2
RAB11FIP3-211ENST00000495663 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
RAB11FIP3-211ENST00000495663 C2orf72A6NCS6 295 aa16.32■□□□□ 0.2
RAB11FIP3-211ENST00000495663 ERBB3P21860 1342 aa16.32■□□□□ 0.2
RAB11FIP3-211ENST00000495663 EFCAB5A4FU69 1503 aa16.31■□□□□ 0.2
RAB11FIP3-211ENST00000495663 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
RAB11FIP3-211ENST00000495663 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
RAB11FIP3-211ENST00000495663 KIF3CO14782 793 aa16.28■□□□□ 0.2
RAB11FIP3-211ENST00000495663 KRTAP3-3Q9BYR6 98 aa16.28■□□□□ 0.2
RAB11FIP3-211ENST00000495663 KRTAP3-2Q9BYR7 98 aa16.28■□□□□ 0.2
RAB11FIP3-211ENST00000495663 ARSIQ5FYB1 569 aa16.27■□□□□ 0.2
RAB11FIP3-211ENST00000495663 GPR153Q6NV75 609 aa16.27■□□□□ 0.2
RAB11FIP3-211ENST00000495663 SPNS2Q8IVW8 549 aa16.26■□□□□ 0.19
RAB11FIP3-211ENST00000495663 ZSWIM6Q9HCJ5 1215 aa16.26■□□□□ 0.19
RAB11FIP3-211ENST00000495663 VARS2Q5ST30 1063 aaKnown RBP16.25■□□□□ 0.19
RAB11FIP3-211ENST00000495663 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■□□□□ 8
RAB11FIP3-211ENST00000495663 TMC2Q8TDI7 906 aa16.24■□□□□ 0.19
RAB11FIP3-211ENST00000495663 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
RAB11FIP3-211ENST00000495663 PTPRGP23470 1445 aa16.23■□□□□ 0.19
RAB11FIP3-211ENST00000495663 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
RAB11FIP3-211ENST00000495663 CLIP1P30622 1438 aa16.22■□□□□ 0.19
RAB11FIP3-211ENST00000495663 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
RAB11FIP3-211ENST00000495663 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
RAB11FIP3-211ENST00000495663 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
RAB11FIP3-211ENST00000495663 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
RAB11FIP3-211ENST00000495663 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
RAB11FIP3-211ENST00000495663 MMRN1Q13201 1228 aa16.19■□□□□ 0.18
RAB11FIP3-211ENST00000495663 FMN1Q68DA7 1419 aa16.14■□□□□ 0.17
RAB11FIP3-211ENST00000495663 UACAQ9BZF9 1416 aa16.14■□□□□ 0.17
RAB11FIP3-211ENST00000495663 ADCY10Q96PN6 1610 aa16.14■□□□□ 0.17
RAB11FIP3-211ENST00000495663 ABCA8O94911 1581 aa16.13■□□□□ 0.17
RAB11FIP3-211ENST00000495663 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
RAB11FIP3-211ENST00000495663 ABCC2Q92887 1545 aa16.13■□□□□ 0.17
RAB11FIP3-211ENST00000495663 UHRF1BP1LA0JNW5 1464 aa16.12■□□□□ 0.17
RAB11FIP3-211ENST00000495663 PLB1Q6P1J6 1458 aa16.12■□□□□ 0.17
RAB11FIP3-211ENST00000495663 NUDT7P0C024 238 aa16.1■□□□□ 0.17
RAB11FIP3-211ENST00000495663 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
RAB11FIP3-211ENST00000495663 PCDHGA4Q9Y5G9 962 aa16.07■□□□□ 0.16
RAB11FIP3-211ENST00000495663 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
RAB11FIP3-211ENST00000495663 ZCCHC11Q5TAX3 1644 aaKnown RBP16.05■□□□□ 0.16
RAB11FIP3-211ENST00000495663 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
RAB11FIP3-211ENST00000495663 ZNF687Q8N1G0 1237 aa16.05■□□□□ 0.16
RAB11FIP3-211ENST00000495663 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
RAB11FIP3-211ENST00000495663 SLC34A2O95436 690 aa16.03■□□□□ 0.16
RAB11FIP3-211ENST00000495663 NUP153P49790 1475 aaKnown RBP16.03■□□□□ 0.16
RAB11FIP3-211ENST00000495663 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
RAB11FIP3-211ENST00000495663 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.16
RAB11FIP3-211ENST00000495663 PLPP6Q8IY26 295 aa16.01■□□□□ 0.15
RAB11FIP3-211ENST00000495663 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
RAB11FIP3-211ENST00000495663 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
RAB11FIP3-211ENST00000495663 DSG2Q14126 1118 aa16■□□□□ 0.15
RAB11FIP3-211ENST00000495663 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
RAB11FIP3-211ENST00000495663 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
RAB11FIP3-211ENST00000495663 RYDENQ9NUL5 291 aaKnown RBP15.99■□□□□ 0.15
RAB11FIP3-211ENST00000495663 LHX6Q9UPM6 363 aa15.99■□□□□ 0.15
RAB11FIP3-211ENST00000495663 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
RAB11FIP3-211ENST00000495663 ATP10BO94823 1461 aa15.98■□□□□ 0.15
RAB11FIP3-211ENST00000495663 FOXK1P85037 733 aa15.98■□□□□ 0.15
RAB11FIP3-211ENST00000495663 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
RAB11FIP3-211ENST00000495663 EPRSP07814 1512 aaKnown RBP15.97■□□□□ 0.15
RAB11FIP3-211ENST00000495663 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
RAB11FIP3-211ENST00000495663 CDK13Q14004 1512 aaKnown RBP15.95■□□□□ 0.14
RAB11FIP3-211ENST00000495663 GTPBP6O43824 516 aaPredicted RBP15.93■□□□□ 0.14
RAB11FIP3-211ENST00000495663 ASXL2Q76L83 1435 aa15.93■□□□□ 0.14
RAB11FIP3-211ENST00000495663 CFAP43Q8NDM7 1665 aa15.91■□□□□ 0.14
RAB11FIP3-211ENST00000495663 WDR7Q9Y4E6 1490 aa15.91■□□□□ 0.14
RAB11FIP3-211ENST00000495663 ANKRD13DQ6ZTN6 518 aa15.89■□□□□ 0.13
RAB11FIP3-211ENST00000495663 PTCD2Q8WV60 388 aaKnown RBP15.89■□□□□ 0.13
RAB11FIP3-211ENST00000495663 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
RAB11FIP3-211ENST00000495663 KIF13AQ9H1H9 1805 aa15.88■□□□□ 0.13
RAB11FIP3-211ENST00000495663 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
RAB11FIP3-211ENST00000495663 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
RAB11FIP3-211ENST00000495663 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
RAB11FIP3-211ENST00000495663 AXIN2Q9Y2T1 843 aa15.87■□□□□ 0.13
RAB11FIP3-211ENST00000495663 DIP2BQ9P265 1576 aa15.87■□□□□ 0.13
RAB11FIP3-211ENST00000495663 ABCC10Q5T3U5 1492 aa15.86■□□□□ 0.13
RAB11FIP3-211ENST00000495663 MAP3K1Q13233 1512 aa15.85■□□□□ 0.13
RAB11FIP3-211ENST00000495663 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.13
RAB11FIP3-211ENST00000495663 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
RAB11FIP3-211ENST00000495663 KDM4FA0A1W2PPD8 638 aa15.83■□□□□ 0.12
RAB11FIP3-211ENST00000495663 LSM11P83369 360 aaKnown RBP eCLIP15.83■□□□□ 0.12
RAB11FIP3-211ENST00000495663 POTEEQ6S8J3 1075 aa15.83■□□□□ 0.12
RAB11FIP3-211ENST00000495663 TROQ12816 1431 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms