RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 RPS28P62857 69 aaKnown RBP4.28□□□□□ -1.72
RAB11FIP3-211ENST00000495663 Q1T7F1 81 aa4.26□□□□□ -1.73
RAB11FIP3-211ENST00000495663 A0A0D9SG42 100 aa4.25□□□□□ -1.73
RAB11FIP3-211ENST00000495663 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
RAB11FIP3-211ENST00000495663 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
RAB11FIP3-211ENST00000495663 A8MU10 97 aa4.22□□□□□ -1.73
RAB11FIP3-211ENST00000495663 UQCR11O14957 56 aa4.22□□□□□ -1.73
RAB11FIP3-211ENST00000495663 PSPHP1O15172 72 aa4.21□□□□□ -1.74
RAB11FIP3-211ENST00000495663 MT1XP80297 61 aa4.21□□□□□ -1.74
RAB11FIP3-211ENST00000495663 SPINT4Q6UDR6 99 aa4.19□□□□□ -1.74
RAB11FIP3-211ENST00000495663 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
RAB11FIP3-211ENST00000495663 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
RAB11FIP3-211ENST00000495663 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
RAB11FIP3-211ENST00000495663 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
RAB11FIP3-211ENST00000495663 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
RAB11FIP3-211ENST00000495663 A6NED7 52 aa4.09□□□□□ -1.75
RAB11FIP3-211ENST00000495663 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.76
RAB11FIP3-211ENST00000495663 NEBP20929 6669 aa4.05□□□□□ -1.76
RAB11FIP3-211ENST00000495663 K7ERS5 55 aa4.04□□□□□ -1.76
RAB11FIP3-211ENST00000495663 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
RAB11FIP3-211ENST00000495663 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
RAB11FIP3-211ENST00000495663 KMT2DO14686 5537 aa3.95□□□□□ -1.78
RAB11FIP3-211ENST00000495663 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
RAB11FIP3-211ENST00000495663 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
RAB11FIP3-211ENST00000495663 TNP1P09430 55 aa3.92□□□□□ -1.78
RAB11FIP3-211ENST00000495663 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
RAB11FIP3-211ENST00000495663 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
RAB11FIP3-211ENST00000495663 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
RAB11FIP3-211ENST00000495663 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
RAB11FIP3-211ENST00000495663 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
RAB11FIP3-211ENST00000495663 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
RAB11FIP3-211ENST00000495663 ROMO1P60602 79 aa3.79□□□□□ -1.8
RAB11FIP3-211ENST00000495663 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
RAB11FIP3-211ENST00000495663 SPRR2EP22531 72 aa3.75□□□□□ -1.81
RAB11FIP3-211ENST00000495663 SPRR2BP35325 72 aa3.75□□□□□ -1.81
RAB11FIP3-211ENST00000495663 SPRR2AP35326 72 aa3.75□□□□□ -1.81
RAB11FIP3-211ENST00000495663 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
RAB11FIP3-211ENST00000495663 MT1EP04732 61 aa3.71□□□□□ -1.82
RAB11FIP3-211ENST00000495663 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
RAB11FIP3-211ENST00000495663 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
RAB11FIP3-211ENST00000495663 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
RAB11FIP3-211ENST00000495663 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
RAB11FIP3-211ENST00000495663 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
RAB11FIP3-211ENST00000495663 SPRR2DP22532 72 aa3.63□□□□□ -1.83
RAB11FIP3-211ENST00000495663 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
RAB11FIP3-211ENST00000495663 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
RAB11FIP3-211ENST00000495663 MT1GP13640 62 aa3.59□□□□□ -1.83
RAB11FIP3-211ENST00000495663 MT1LQ93083 61 aa3.59□□□□□ -1.83
RAB11FIP3-211ENST00000495663 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
RAB11FIP3-211ENST00000495663 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
RAB11FIP3-211ENST00000495663 MT1MQ8N339 61 aa3.52□□□□□ -1.85
RAB11FIP3-211ENST00000495663 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
RAB11FIP3-211ENST00000495663 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
RAB11FIP3-211ENST00000495663 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
RAB11FIP3-211ENST00000495663 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
RAB11FIP3-211ENST00000495663 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
RAB11FIP3-211ENST00000495663 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
RAB11FIP3-211ENST00000495663 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
RAB11FIP3-211ENST00000495663 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.9
RAB11FIP3-211ENST00000495663 MT4P47944 62 aa3.14□□□□□ -1.91
RAB11FIP3-211ENST00000495663 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
RAB11FIP3-211ENST00000495663 MT1AP04731 61 aa3.07□□□□□ -1.92
RAB11FIP3-211ENST00000495663 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
RAB11FIP3-211ENST00000495663 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
RAB11FIP3-211ENST00000495663 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
RAB11FIP3-211ENST00000495663 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
RAB11FIP3-211ENST00000495663 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
RAB11FIP3-211ENST00000495663 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
RAB11FIP3-211ENST00000495663 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
RAB11FIP3-211ENST00000495663 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
RAB11FIP3-211ENST00000495663 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
RAB11FIP3-211ENST00000495663 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
RAB11FIP3-211ENST00000495663 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
RAB11FIP3-211ENST00000495663 INE1O15225 51 aa2.1□□□□□ -2.07
RAB11FIP3-211ENST00000495663 PRM1P04553 51 aa1.95□□□□□ -2.1
RAB11FIP3-211ENST00000495663 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
RAB11FIP3-211ENST00000495663 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
RAB11FIP3-211ENST00000495663 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms