RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 SF3B4Q15427 424 aaKnown RBP eCLIP9.08□□□□□ -0.962e-38■■■■■ 144.8
RAB11FIP3-211ENST00000495663 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.34□□□□□ -1.076e-35■■■■□ 21.5
RAB11FIP3-211ENST00000495663 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.638e-25■■□□□ 12.7
RAB11FIP3-211ENST00000495663 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.45□□□□□ -0.582e-18■□□□□ 8.2
RAB11FIP3-211ENST00000495663 SF3A3Q12874 501 aaKnown RBP eCLIP9.43□□□□□ -0.93e-17■■□□□ 12.6
RAB11FIP3-211ENST00000495663 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.773e-16■■■■□ 25.3
RAB11FIP3-211ENST00000495663 PCBP2Q15366 365 aaKnown RBP eCLIP9.7□□□□□ -0.863e-13■□□□□ 11
RAB11FIP3-211ENST00000495663 RBFOX2O43251 390 aaKnown RBP eCLIP8.04□□□□□ -1.122e-11■■■■■ 39
RAB11FIP3-211ENST00000495663 TBRG4Q969Z0 631 aaKnown RBP eCLIP10□□□□□ -0.813e-11■■■■■ 28.8
RAB11FIP3-211ENST00000495663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.272e-9■□□□□ 10
RAB11FIP3-211ENST00000495663 SMNDC1O75940 238 aaKnown RBP eCLIP10.87□□□□□ -0.672e-9■■□□□ 12.2
RAB11FIP3-211ENST00000495663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.53□□□□□ -0.721e-8■■□□□ 11.9
RAB11FIP3-211ENST00000495663 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.362e-8■■□□□ 12.1
RAB11FIP3-211ENST00000495663 HNRNPLP14866 589 aaKnown RBP eCLIP10.3□□□□□ -0.762e-8■■□□□ 13.1
RAB11FIP3-211ENST00000495663 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.29□□□□□ -0.924e-8■■■□□ 14.8
RAB11FIP3-211ENST00000495663 EFTUD2Q15029 972 aaKnown RBP eCLIP9.89□□□□□ -0.834e-8■□□□□ 9.6
RAB11FIP3-211ENST00000495663 NCBP2P52298 156 aaKnown RBP eCLIP9.41□□□□□ -0.95e-8■■■□□ 15.2
RAB11FIP3-211ENST00000495663 PRPF4O43172 522 aaKnown RBP eCLIP9.7□□□□□ -0.867e-8■■■■□ 21.4
RAB11FIP3-211ENST00000495663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.6□□□□□ -0.717e-8■■■■■ 29.7
RAB11FIP3-211ENST00000495663 RBM5P52756 815 aaKnown RBP eCLIP12.21□□□□□ -0.451e-7■■□□□ 11.6
RAB11FIP3-211ENST00000495663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.58□□□□□ -0.723e-7■■□□□ 13.3
RAB11FIP3-211ENST00000495663 U2AF2P26368 475 aaKnown RBP eCLIP11.48□□□□□ -0.575e-7■□□□□ 9.1
RAB11FIP3-211ENST00000495663 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.068e-7■■■□□ 17.3
RAB11FIP3-211ENST00000495663 TIA1P31483 386 aaKnown RBP eCLIP9.51□□□□□ -0.899e-7■■■■□ 22.9
RAB11FIP3-211ENST00000495663 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■□□□□ 8
RAB11FIP3-211ENST00000495663 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.49□□□□□ -0.731e-6■■■□□ 15.1
RAB11FIP3-211ENST00000495663 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.691e-6■■■■■ 28.8
RAB11FIP3-211ENST00000495663 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■□□□□ 9
RAB11FIP3-211ENST00000495663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.77□□□□□ -1.012e-6■■□□□ 11.5
RAB11FIP3-211ENST00000495663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■■■□□ 19.1
RAB11FIP3-211ENST00000495663 CDC40O60508 579 aaKnown RBP eCLIP9.15□□□□□ -0.942e-6■□□□□ 10.4
RAB11FIP3-211ENST00000495663 ILF3Q12906 894 aaKnown RBP eCLIP9.93□□□□□ -0.822e-6■■■□□ 19.2
RAB11FIP3-211ENST00000495663 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■□□□□ 9.9
RAB11FIP3-211ENST00000495663 SFPQP23246 707 aaKnown RBP eCLIP11.12□□□□□ -0.636e-6■□□□□ 8.7
RAB11FIP3-211ENST00000495663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.94□□□□□ -0.57e-6■■■□□ 18.9
Retrieved 35 of 35 RNA–protein pairs in 9.4 ms