RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 AEBP2Q6ZN18 517 aaPredicted RBP36.89■■■■□ 3.5
RAB11FIP3-211ENST00000495663 CHIC1Q5VXU3 224 aa35.18■■■■□ 3.22
RAB11FIP3-211ENST00000495663 SENP3Q9H4L4 574 aaPredicted RBP31.35■■■□□ 2.61
RAB11FIP3-211ENST00000495663 PHF23Q9BUL5 403 aaPredicted RBP31.02■■■□□ 2.56
RAB11FIP3-211ENST00000495663 FOXD1Q16676 465 aa29.25■■■□□ 2.27
RAB11FIP3-211ENST00000495663 PLPPR3Q6T4P5 718 aa28.19■■■□□ 2.1
RAB11FIP3-211ENST00000495663 PPP6R1Q9UPN7 881 aa27.55■■■□□ 2
RAB11FIP3-211ENST00000495663 ADRA2BP18089 450 aa27.5■■□□□ 1.99
RAB11FIP3-211ENST00000495663 PIAS4Q8N2W9 510 aaPredicted RBP27.41■■□□□ 1.98
RAB11FIP3-211ENST00000495663 MSH5O43196 834 aa27.22■■□□□ 1.95
RAB11FIP3-211ENST00000495663 POTEDQ86YR6 584 aa26.27■■□□□ 1.8
RAB11FIP3-211ENST00000495663 MAPK8IP2Q13387 824 aaPredicted RBP25.21■■□□□ 1.63
RAB11FIP3-211ENST00000495663 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
RAB11FIP3-211ENST00000495663 DMRT2Q9Y5R5 561 aa24.9■■□□□ 1.58
RAB11FIP3-211ENST00000495663 PPP4R3CPQ6ZMV5 832 aa24.78■■□□□ 1.56
RAB11FIP3-211ENST00000495663 CNKSR2Q8WXI2 1034 aa24.22■■□□□ 1.47
RAB11FIP3-211ENST00000495663 HOXD11P31277 338 aaPredicted RBP24.04■■□□□ 1.44
RAB11FIP3-211ENST00000495663 DCAF8L1A6NGE4 600 aa24.01■■□□□ 1.43
RAB11FIP3-211ENST00000495663 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
RAB11FIP3-211ENST00000495663 RNF216Q9NWF9 866 aaPredicted RBP23.93■■□□□ 1.42
RAB11FIP3-211ENST00000495663 NCBP3Q53F19 620 aaKnown RBP23.84■■□□□ 1.41
RAB11FIP3-211ENST00000495663 NPM3O75607 178 aaKnown RBP23.57■■□□□ 1.36
RAB11FIP3-211ENST00000495663 KCNA4P22459 653 aa23.35■■□□□ 1.33
RAB11FIP3-211ENST00000495663 CACNB1Q02641 598 aaPredicted RBP23.3■■□□□ 1.32
RAB11FIP3-211ENST00000495663 RNF39Q9H2S5 420 aa23.27■■□□□ 1.32
RAB11FIP3-211ENST00000495663 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
RAB11FIP3-211ENST00000495663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.272e-9■□□□□ 10
RAB11FIP3-211ENST00000495663 C1QBPQ07021 282 aaKnown RBP22.9■■□□□ 1.26
RAB11FIP3-211ENST00000495663 U3KPZ7 1027 aaPredicted RBP22.53■■□□□ 1.2
RAB11FIP3-211ENST00000495663 SLC4A2P04920 1241 aa22.45■■□□□ 1.18
RAB11FIP3-211ENST00000495663 SPINK5Q9NQ38 1064 aaPredicted RBP22.18■■□□□ 1.14
RAB11FIP3-211ENST00000495663 CAPN15O75808 1086 aa22.13■■□□□ 1.13
RAB11FIP3-211ENST00000495663 SLC4A1APQ9BWU0 796 aaKnown RBP22.07■■□□□ 1.12
RAB11FIP3-211ENST00000495663 DSG3P32926 999 aa21.89■■□□□ 1.09
RAB11FIP3-211ENST00000495663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
RAB11FIP3-211ENST00000495663 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
RAB11FIP3-211ENST00000495663 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
RAB11FIP3-211ENST00000495663 APLP2Q06481 763 aa21.82■■□□□ 1.08
RAB11FIP3-211ENST00000495663 SAMD1Q6SPF0 538 aaPredicted RBP21.79■■□□□ 1.08
RAB11FIP3-211ENST00000495663 MYCNP04198 464 aaPredicted RBP21.75■■□□□ 1.07
RAB11FIP3-211ENST00000495663 ZNF219Q9P2Y4 722 aaPredicted RBP21.71■■□□□ 1.07
RAB11FIP3-211ENST00000495663 ABCB7O75027 752 aa21.68■■□□□ 1.06
RAB11FIP3-211ENST00000495663 FOXD4L1Q9NU39 408 aa21.67■■□□□ 1.06
RAB11FIP3-211ENST00000495663 ZBTB22O15209 634 aa21.49■■□□□ 1.03
RAB11FIP3-211ENST00000495663 ATF5Q9Y2D1 282 aaPredicted RBP21.32■■□□□ 1
RAB11FIP3-211ENST00000495663 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
RAB11FIP3-211ENST00000495663 POLA2Q14181 598 aa21.26■□□□□ 0.99
RAB11FIP3-211ENST00000495663 ATXN8OSP0DMR3 200 aa20.88■□□□□ 0.93
RAB11FIP3-211ENST00000495663 RBM42Q9BTD8 480 aaKnown RBP20.82■□□□□ 0.92
RAB11FIP3-211ENST00000495663 ZBTB12Q9Y330 459 aaPredicted RBP20.76■□□□□ 0.91
RAB11FIP3-211ENST00000495663 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
RAB11FIP3-211ENST00000495663 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
RAB11FIP3-211ENST00000495663 POTEHQ6S545 545 aa20.62■□□□□ 0.89
RAB11FIP3-211ENST00000495663 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
RAB11FIP3-211ENST00000495663 ABCC9O60706 1549 aa20.48■□□□□ 0.87
RAB11FIP3-211ENST00000495663 FBLN2P98095 1184 aa20.41■□□□□ 0.86
RAB11FIP3-211ENST00000495663 AKT1S1Q96B36 256 aa20.4■□□□□ 0.86
RAB11FIP3-211ENST00000495663 CHRDL2Q6WN34 429 aa20.34■□□□□ 0.85
RAB11FIP3-211ENST00000495663 MKRN4PQ13434 485 aaPredicted RBP20.32■□□□□ 0.84
RAB11FIP3-211ENST00000495663 REM2Q8IYK8 340 aaPredicted RBP20.27■□□□□ 0.84
RAB11FIP3-211ENST00000495663 SPDYE2BA6NHP3 402 aa20.16■□□□□ 0.82
RAB11FIP3-211ENST00000495663 SPDYE6P0CI01 402 aa20.16■□□□□ 0.82
RAB11FIP3-211ENST00000495663 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
RAB11FIP3-211ENST00000495663 PITPNM1O00562 1244 aa20.08■□□□□ 0.81
RAB11FIP3-211ENST00000495663 ZCCHC6Q5VYS8 1495 aaKnown RBP20.04■□□□□ 0.8
RAB11FIP3-211ENST00000495663 ZNF692Q9BU19 519 aaPredicted RBP20.02■□□□□ 0.8
RAB11FIP3-211ENST00000495663 SSUH2Q9Y2M2 353 aa19.93■□□□□ 0.78
RAB11FIP3-211ENST00000495663 PIP4P2Q8N4L2 257 aa19.92■□□□□ 0.78
RAB11FIP3-211ENST00000495663 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
RAB11FIP3-211ENST00000495663 NACADO15069 1562 aa19.89■□□□□ 0.77
RAB11FIP3-211ENST00000495663 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
RAB11FIP3-211ENST00000495663 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
RAB11FIP3-211ENST00000495663 MYO15BQ96JP2 1530 aa19.85■□□□□ 0.77
RAB11FIP3-211ENST00000495663 CLEC11AQ9Y240 323 aa19.82■□□□□ 0.76
RAB11FIP3-211ENST00000495663 FXR2P51116 673 aaKnown RBP eCLIP19.79■□□□□ 0.76
RAB11FIP3-211ENST00000495663 SPDYE1Q8NFV5 336 aaPredicted RBP19.78■□□□□ 0.76
RAB11FIP3-211ENST00000495663 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
RAB11FIP3-211ENST00000495663 PRKAR2AP13861 404 aaKnown RBP19.56■□□□□ 0.72
RAB11FIP3-211ENST00000495663 HAX1O00165 279 aa19.52■□□□□ 0.72
RAB11FIP3-211ENST00000495663 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
RAB11FIP3-211ENST00000495663 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
RAB11FIP3-211ENST00000495663 PRR29P0C7W0 189 aa19.46■□□□□ 0.71
RAB11FIP3-211ENST00000495663 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
RAB11FIP3-211ENST00000495663 SP7Q8TDD2 431 aaPredicted RBP19.42■□□□□ 0.7
RAB11FIP3-211ENST00000495663 SCRIBQ14160 1630 aa19.39■□□□□ 0.69
RAB11FIP3-211ENST00000495663 EVX2Q03828 476 aa19.32■□□□□ 0.68
RAB11FIP3-211ENST00000495663 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
RAB11FIP3-211ENST00000495663 C19orf67A6NJJ6 358 aa19.15■□□□□ 0.66
RAB11FIP3-211ENST00000495663 STAG3Q9UJ98 1225 aa19.14■□□□□ 0.65
RAB11FIP3-211ENST00000495663 FARP1Q9Y4F1 1045 aaPredicted RBP19.09■□□□□ 0.65
RAB11FIP3-211ENST00000495663 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
RAB11FIP3-211ENST00000495663 CREBZFQ9NS37 354 aa19.04■□□□□ 0.64
RAB11FIP3-211ENST00000495663 CD44P16070 742 aaKnown RBP18.95■□□□□ 0.62
RAB11FIP3-211ENST00000495663 PROM2Q8N271 834 aa18.95■□□□□ 0.62
RAB11FIP3-211ENST00000495663 GABBR2O75899 941 aa18.85■□□□□ 0.61
RAB11FIP3-211ENST00000495663 FKBP8Q14318 412 aa18.77■□□□□ 0.6
RAB11FIP3-211ENST00000495663 ZRANB1Q9UGI0 708 aa18.73■□□□□ 0.59
RAB11FIP3-211ENST00000495663 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
RAB11FIP3-211ENST00000495663 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
RAB11FIP3-211ENST00000495663 NPM1P06748 294 aaKnown RBP eCLIP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms