RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CAMSAP1Q5T5Y3 1602 aa14.95□□□□□ -0.02
MSH5-218ENST00000494646 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
MSH5-218ENST00000494646 CHIC2Q9UKJ5 165 aa14.95□□□□□ -0.02
MSH5-218ENST00000494646 PTPN23Q9H3S7 1636 aa14.94□□□□□ -0.02
MSH5-218ENST00000494646 MAST1Q9Y2H9 1570 aa14.94□□□□□ -0.02
MSH5-218ENST00000494646 MYO3AQ8NEV4 1616 aa14.93□□□□□ -0.02
MSH5-218ENST00000494646 PTPRTO14522 1441 aa14.92□□□□□ -0.02
MSH5-218ENST00000494646 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
MSH5-218ENST00000494646 ABCC5O15440 1437 aa14.92□□□□□ -0.02
MSH5-218ENST00000494646 KDM5DQ9BY66 1539 aa14.91□□□□□ -0.02
MSH5-218ENST00000494646 CEP170BQ9Y4F5 1589 aaPredicted RBP14.9□□□□□ -0.02
MSH5-218ENST00000494646 TNRQ92752 1358 aa14.9□□□□□ -0.02
MSH5-218ENST00000494646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.021e-7■■■■□ 20.8
MSH5-218ENST00000494646 FGD6Q6ZV73 1430 aa14.9□□□□□ -0.02
MSH5-218ENST00000494646 FAM50AQ14320 339 aaKnown RBP14.89□□□□□ -0.03
MSH5-218ENST00000494646 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
MSH5-218ENST00000494646 ZNF142P52746 1687 aaPredicted RBP14.88□□□□□ -0.03
MSH5-218ENST00000494646 PZPP20742 1482 aa14.88□□□□□ -0.03
MSH5-218ENST00000494646 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
MSH5-218ENST00000494646 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
MSH5-218ENST00000494646 DAPK1P53355 1430 aa14.87□□□□□ -0.03
MSH5-218ENST00000494646 PKD2Q13563 968 aa14.87□□□□□ -0.03
MSH5-218ENST00000494646 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
MSH5-218ENST00000494646 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
MSH5-218ENST00000494646 DUOX2Q9NRD8 1548 aa14.87□□□□□ -0.03
MSH5-218ENST00000494646 CEP152O94986 1710 aa14.86□□□□□ -0.03
MSH5-218ENST00000494646 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
MSH5-218ENST00000494646 TCOF1Q13428 1488 aaKnown RBP14.86□□□□□ -0.03
MSH5-218ENST00000494646 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
MSH5-218ENST00000494646 ABCC3O15438 1527 aa14.84□□□□□ -0.03
MSH5-218ENST00000494646 THEMISQ8N1K5 641 aaPredicted RBP14.84□□□□□ -0.03
MSH5-218ENST00000494646 ZNF335Q9H4Z2 1342 aaPredicted RBP14.84□□□□□ -0.03
MSH5-218ENST00000494646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSH5-218ENST00000494646 PLA2R1Q13018 1463 aa14.83□□□□□ -0.03
MSH5-218ENST00000494646 FAM135AQ9P2D6 1515 aa14.83□□□□□ -0.04
MSH5-218ENST00000494646 LTBP4Q8N2S1 1624 aa14.83□□□□□ -0.04
MSH5-218ENST00000494646 MROH1Q8NDA8 1641 aa14.83□□□□□ -0.04
MSH5-218ENST00000494646 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
MSH5-218ENST00000494646 ANKLE2Q86XL3 938 aa14.82□□□□□ -0.04
MSH5-218ENST00000494646 ANKRD30AQ9BXX3 1397 aa14.82□□□□□ -0.04
MSH5-218ENST00000494646 ZC3H13Q5T200 1668 aaKnown RBP14.81□□□□□ -0.04
MSH5-218ENST00000494646 UGGT1Q9NYU2 1555 aa14.8□□□□□ -0.04
MSH5-218ENST00000494646 POLR1AO95602 1720 aaPredicted RBP14.79□□□□□ -0.04
MSH5-218ENST00000494646 ERBINQ96RT1 1412 aa14.79□□□□□ -0.04
MSH5-218ENST00000494646 NLRP1Q9C000 1473 aa14.78□□□□□ -0.04
MSH5-218ENST00000494646 ITGAEP38570 1179 aa14.78□□□□□ -0.04
MSH5-218ENST00000494646 ERVK-7P63135 1459 aa14.77□□□□□ -0.04
MSH5-218ENST00000494646 KANK1Q14678 1352 aa14.77□□□□□ -0.04
MSH5-218ENST00000494646 SPATA31D1Q6ZQQ2 1576 aa14.77□□□□□ -0.05
MSH5-218ENST00000494646 NEURL4Q96JN8 1562 aa14.75□□□□□ -0.05
MSH5-218ENST00000494646 DEPDC5O75140 1603 aa14.74□□□□□ -0.05
MSH5-218ENST00000494646 UBAP1LF5GYI3 381 aa14.74□□□□□ -0.05
MSH5-218ENST00000494646 PRDM15P57071 1507 aaPredicted RBP14.74□□□□□ -0.05
MSH5-218ENST00000494646 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
MSH5-218ENST00000494646 ARHGAP31Q2M1Z3 1444 aa14.73□□□□□ -0.05
MSH5-218ENST00000494646 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
MSH5-218ENST00000494646 ADGRL2O95490 1459 aa14.72□□□□□ -0.05
MSH5-218ENST00000494646 IDI1Q13907 227 aa14.72□□□□□ -0.05
MSH5-218ENST00000494646 TXNDC2Q86VQ3 553 aa14.72□□□□□ -0.05
MSH5-218ENST00000494646 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
MSH5-218ENST00000494646 LTKP29376 864 aa14.71□□□□□ -0.05
MSH5-218ENST00000494646 ANKRD50Q9ULJ7 1429 aa14.71□□□□□ -0.05
MSH5-218ENST00000494646 IQSEC2Q5JU85 1478 aa14.69□□□□□ -0.06
MSH5-218ENST00000494646 MED14O60244 1454 aa14.69□□□□□ -0.06
MSH5-218ENST00000494646 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
MSH5-218ENST00000494646 VWDEQ8N2E2 1590 aa14.68□□□□□ -0.06
MSH5-218ENST00000494646 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
MSH5-218ENST00000494646 LMTK2Q8IWU2 1503 aa14.67□□□□□ -0.06
MSH5-218ENST00000494646 EID1Q9Y6B2 187 aa14.67□□□□□ -0.06
MSH5-218ENST00000494646 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
MSH5-218ENST00000494646 PIP4K2BP78356 416 aa14.66□□□□□ -0.06
MSH5-218ENST00000494646 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
MSH5-218ENST00000494646 STRCP1A6NGW2 1772 aa14.65□□□□□ -0.06
MSH5-218ENST00000494646 SYNMO15061 1565 aa14.64□□□□□ -0.07
MSH5-218ENST00000494646 SCAF11Q99590 1463 aaKnown RBP14.63□□□□□ -0.07
MSH5-218ENST00000494646 CPS1P31327 1500 aa14.63□□□□□ -0.07
MSH5-218ENST00000494646 EFCAB6Q5THR3 1501 aa14.63□□□□□ -0.07
MSH5-218ENST00000494646 TOM1O60784 492 aa14.63□□□□□ -0.07
MSH5-218ENST00000494646 SLC52A1Q9NWF4 448 aa14.63□□□□□ -0.07
MSH5-218ENST00000494646 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
MSH5-218ENST00000494646 TMEM2Q9UHN6 1383 aa14.62□□□□□ -0.07
MSH5-218ENST00000494646 SLIT1O75093 1534 aa14.62□□□□□ -0.07
MSH5-218ENST00000494646 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
MSH5-218ENST00000494646 NOS1P29475 1434 aa14.62□□□□□ -0.07
MSH5-218ENST00000494646 BCANQ96GW7 911 aa14.62□□□□□ -0.07
MSH5-218ENST00000494646 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
MSH5-218ENST00000494646 ROCK1Q13464 1354 aa14.61□□□□□ -0.07
MSH5-218ENST00000494646 SLC26A8Q96RN1 970 aa14.61□□□□□ -0.07
MSH5-218ENST00000494646 TET3O43151 1660 aa14.6□□□□□ -0.07
MSH5-218ENST00000494646 NUP155O75694 1391 aa14.6□□□□□ -0.07
MSH5-218ENST00000494646 DISP3Q9P2K9 1392 aa14.6□□□□□ -0.07
MSH5-218ENST00000494646 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.07
MSH5-218ENST00000494646 UNC13BO14795 1591 aa14.58□□□□□ -0.08
MSH5-218ENST00000494646 E9PCH4 1651 aa14.58□□□□□ -0.08
MSH5-218ENST00000494646 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
MSH5-218ENST00000494646 HSPA1LP34931 641 aa14.57□□□□□ -0.08
MSH5-218ENST00000494646 NUTM2DQ5VT03 806 aaPredicted RBP14.57□□□□□ -0.08
MSH5-218ENST00000494646 KDM5AP29375 1690 aaKnown RBP14.57□□□□□ -0.08
MSH5-218ENST00000494646 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
MSH5-218ENST00000494646 RBM33Q96EV2 1170 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms