RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 ZNF608Q9ULD9 1512 aaPredicted RBP8.87□□□□□ -0.99
EWSR1-220ENST00000493426 MBD5Q9P267 1494 aa8.87□□□□□ -0.99
EWSR1-220ENST00000493426 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
EWSR1-220ENST00000493426 SUPT6HQ7KZ85 1726 aaKnown RBP8.86□□□□□ -0.99
EWSR1-220ENST00000493426 UHRF1BP1Q6BDS2 1440 aa8.86□□□□□ -0.99
EWSR1-220ENST00000493426 KDM2BQ8NHM5 1336 aa8.85□□□□□ -0.99
EWSR1-220ENST00000493426 MYBBP1AQ9BQG0 1328 aaKnown RBP8.85□□□□□ -0.99
EWSR1-220ENST00000493426 L1TD1Q5T7N2 865 aaKnown RBP8.85□□□□□ -0.99
EWSR1-220ENST00000493426 TMC1Q8TDI8 760 aa8.85□□□□□ -0.99
EWSR1-220ENST00000493426 PKNOX2Q96KN3 472 aa8.85□□□□□ -0.99
EWSR1-220ENST00000493426 SAMD9Q5K651 1589 aa8.85□□□□□ -0.99
EWSR1-220ENST00000493426 PLEKHH2Q8IVE3 1493 aa8.83□□□□□ -1
EWSR1-220ENST00000493426 RRP9O43818 475 aaKnown RBP8.83□□□□□ -1
EWSR1-220ENST00000493426 FAM161AQ3B820 660 aa8.83□□□□□ -1
EWSR1-220ENST00000493426 CENPQQ7L2Z9 268 aaPredicted RBP8.83□□□□□ -1
EWSR1-220ENST00000493426 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
EWSR1-220ENST00000493426 OSCARQ8IYS5 282 aa8.83□□□□□ -1
EWSR1-220ENST00000493426 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
EWSR1-220ENST00000493426 FBLN2P98095 1184 aa8.81□□□□□ -1
EWSR1-220ENST00000493426 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
EWSR1-220ENST00000493426 CLCN1P35523 988 aa8.8□□□□□ -1
EWSR1-220ENST00000493426 NLRP13Q86W25 1043 aa8.8□□□□□ -1
EWSR1-220ENST00000493426 DCAF11Q8TEB1 546 aa8.8□□□□□ -1
EWSR1-220ENST00000493426 TDRD9Q8NDG6 1382 aaKnown RBP8.8□□□□□ -1
EWSR1-220ENST00000493426 USP47Q96K76 1375 aa8.8□□□□□ -1
EWSR1-220ENST00000493426 CHD1O14646 1710 aa8.8□□□□□ -1
EWSR1-220ENST00000493426 CCDC144AA2RUR9 1427 aa8.8□□□□□ -1
EWSR1-220ENST00000493426 RALGAPBQ86X10 1494 aa8.79□□□□□ -1
EWSR1-220ENST00000493426 MAGI1Q96QZ7 1491 aaPredicted RBP8.79□□□□□ -1
EWSR1-220ENST00000493426 ZMYM3Q14202 1370 aa8.79□□□□□ -1
EWSR1-220ENST00000493426 PARD3Q8TEW0 1356 aa8.79□□□□□ -1
EWSR1-220ENST00000493426 C8orf34Q49A92 452 aa8.79□□□□□ -1
EWSR1-220ENST00000493426 RRP7BPQ9NSQ0 103 aa8.79□□□□□ -1
EWSR1-220ENST00000493426 ISY1Q9ULR0 285 aaKnown RBP8.79□□□□□ -1
EWSR1-220ENST00000493426 BLMP54132 1417 aaPredicted RBP8.79□□□□□ -1
EWSR1-220ENST00000493426 CENPJQ9HC77 1338 aaPredicted RBP8.79□□□□□ -1
EWSR1-220ENST00000493426 KDM5CP41229 1560 aa8.78□□□□□ -1
EWSR1-220ENST00000493426 FSD2A1L4K1 749 aa8.78□□□□□ -1
EWSR1-220ENST00000493426 P3H3Q8IVL6 736 aa8.78□□□□□ -1
EWSR1-220ENST00000493426 BCORL1Q5H9F3 1711 aa8.77□□□□□ -1
EWSR1-220ENST00000493426 ARHGEF12Q9NZN5 1544 aa8.77□□□□□ -1.01
EWSR1-220ENST00000493426 FRAT2O75474 233 aaPredicted RBP8.77□□□□□ -1.01
EWSR1-220ENST00000493426 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
EWSR1-220ENST00000493426 KDM6BO15054 1643 aa8.76□□□□□ -1.01
EWSR1-220ENST00000493426 PBRM1Q86U86 1689 aa8.76□□□□□ -1.01
EWSR1-220ENST00000493426 CRBNQ96SW2 442 aa8.76□□□□□ -1.01
EWSR1-220ENST00000493426 RRAGDQ9NQL2 400 aaPredicted RBP8.76□□□□□ -1.01
EWSR1-220ENST00000493426 KIAA1107Q9UPP5 1409 aa8.76□□□□□ -1.01
EWSR1-220ENST00000493426 PZPP20742 1482 aa8.76□□□□□ -1.01
EWSR1-220ENST00000493426 KIF14Q15058 1648 aa8.76□□□□□ -1.01
EWSR1-220ENST00000493426 ADAMTS12P58397 1594 aa8.75□□□□□ -1.01
EWSR1-220ENST00000493426 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
EWSR1-220ENST00000493426 EIF3AQ14152 1382 aaKnown RBP8.74□□□□□ -1.01
EWSR1-220ENST00000493426 IQGAP2Q13576 1575 aa8.74□□□□□ -1.01
EWSR1-220ENST00000493426 ABCC5O15440 1437 aa8.74□□□□□ -1.01
EWSR1-220ENST00000493426 DAPK1P53355 1430 aa8.74□□□□□ -1.01
EWSR1-220ENST00000493426 PER1O15534 1290 aaPredicted RBP8.74□□□□□ -1.01
EWSR1-220ENST00000493426 MAGI3Q5TCQ9 1506 aa8.74□□□□□ -1.01
EWSR1-220ENST00000493426 KIAA0586Q9BVV6 1533 aa8.74□□□□□ -1.01
EWSR1-220ENST00000493426 LRRIQ1Q96JM4 1722 aa8.74□□□□□ -1.01
EWSR1-220ENST00000493426 RIMBP3CA6NJZ7 1639 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 RIMBP3BA6NNM3 1639 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 RIMBP3Q9UFD9 1639 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 E9PCH4 1651 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 SYNJ2O15056 1496 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 AAMPQ13685 434 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 BECN1Q14457 450 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 HSP90AA2PQ14568 343 aaPredicted RBP8.73□□□□□ -1.01
EWSR1-220ENST00000493426 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.73□□□□□ -1.01
EWSR1-220ENST00000493426 ANTXR1Q9H6X2 564 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 USP19O94966 1318 aa8.73□□□□□ -1.01
EWSR1-220ENST00000493426 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
EWSR1-220ENST00000493426 NGEFQ8N5V2 710 aa8.72□□□□□ -1.01
EWSR1-220ENST00000493426 PNNQ9H307 717 aaKnown RBP8.72□□□□□ -1.01
EWSR1-220ENST00000493426 DNMT1P26358 1616 aaKnown RBP8.72□□□□□ -1.01
EWSR1-220ENST00000493426 ADGRL2O95490 1459 aa8.71□□□□□ -1.01
EWSR1-220ENST00000493426 TPM2P07951 284 aa8.71□□□□□ -1.02
EWSR1-220ENST00000493426 TERF1P54274 439 aa8.71□□□□□ -1.02
EWSR1-220ENST00000493426 TRMT2AQ8IZ69 625 aaKnown RBP8.71□□□□□ -1.02
EWSR1-220ENST00000493426 ZNF521Q96K83 1311 aa8.71□□□□□ -1.02
EWSR1-220ENST00000493426 EPRSP07814 1512 aaKnown RBP8.7□□□□□ -1.02
EWSR1-220ENST00000493426 XRCC6P12956 609 aaKnown RBP eCLIP8.7□□□□□ -1.02
EWSR1-220ENST00000493426 SLC4A3P48751 1232 aa8.7□□□□□ -1.02
EWSR1-220ENST00000493426 MRE11P49959 708 aa8.7□□□□□ -1.02
EWSR1-220ENST00000493426 CHIC2Q9UKJ5 165 aa8.7□□□□□ -1.02
EWSR1-220ENST00000493426 MAPK8IP3Q9UPT6 1336 aa8.7□□□□□ -1.02
EWSR1-220ENST00000493426 CDCA7LQ96GN5 454 aa8.69□□□□□ -1.02
EWSR1-220ENST00000493426 POGKQ9P215 609 aa8.69□□□□□ -1.02
EWSR1-220ENST00000493426 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
EWSR1-220ENST00000493426 NINLQ9Y2I6 1382 aa8.69□□□□□ -1.02
EWSR1-220ENST00000493426 GOLGA6L3A6NEY3 463 aa8.68□□□□□ -1.02
EWSR1-220ENST00000493426 DUSP27Q5VZP5 1158 aa8.68□□□□□ -1.02
EWSR1-220ENST00000493426 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
EWSR1-220ENST00000493426 PDCL3Q9H2J4 239 aa8.68□□□□□ -1.02
EWSR1-220ENST00000493426 SCAPERQ9BY12 1400 aa8.68□□□□□ -1.02
EWSR1-220ENST00000493426 RBM42Q9BTD8 480 aaKnown RBP8.67□□□□□ -1.02
EWSR1-220ENST00000493426 CARD11Q9BXL7 1154 aa8.67□□□□□ -1.02
EWSR1-220ENST00000493426 KDM5DQ9BY66 1539 aa8.67□□□□□ -1.02
EWSR1-220ENST00000493426 GRIN2AQ12879 1464 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms