RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 AEBP2Q6ZN18 517 aaPredicted RBP15.02■□□□□ -0
EWSR1-220ENST00000493426 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
EWSR1-220ENST00000493426 SENP3Q9H4L4 574 aaPredicted RBP12.93□□□□□ -0.34
EWSR1-220ENST00000493426 PHF23Q9BUL5 403 aaPredicted RBP12.86□□□□□ -0.35
EWSR1-220ENST00000493426 NISCHQ9Y2I1 1504 aa12.83□□□□□ -0.36
EWSR1-220ENST00000493426 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
EWSR1-220ENST00000493426 FOXD1Q16676 465 aa11.89□□□□□ -0.51
EWSR1-220ENST00000493426 HRCP23327 699 aa11.45□□□□□ -0.58
EWSR1-220ENST00000493426 ADRA2BP18089 450 aa11.39□□□□□ -0.59
EWSR1-220ENST00000493426 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
EWSR1-220ENST00000493426 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
EWSR1-220ENST00000493426 PIAS4Q8N2W9 510 aaPredicted RBP11.27□□□□□ -0.61
EWSR1-220ENST00000493426 MSH5O43196 834 aa11.12□□□□□ -0.63
EWSR1-220ENST00000493426 CCDC180Q9P1Z9 1646 aa11.08□□□□□ -0.64
EWSR1-220ENST00000493426 MYT1Q01538 1121 aa11.04□□□□□ -0.64
EWSR1-220ENST00000493426 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
EWSR1-220ENST00000493426 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
EWSR1-220ENST00000493426 ZEB1P37275 1124 aaPredicted RBP10.92□□□□□ -0.66
EWSR1-220ENST00000493426 MYO15BQ96JP2 1530 aa10.92□□□□□ -0.66
EWSR1-220ENST00000493426 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
EWSR1-220ENST00000493426 SUPT5HO00267 1087 aaKnown RBP10.88□□□□□ -0.67
EWSR1-220ENST00000493426 ZCCHC6Q5VYS8 1495 aaKnown RBP10.83□□□□□ -0.68
EWSR1-220ENST00000493426 TRIM26Q12899 539 aaPredicted RBP10.83□□□□□ -0.68
EWSR1-220ENST00000493426 SHROOM4Q9ULL8 1493 aa10.8□□□□□ -0.68
EWSR1-220ENST00000493426 ABCC9O60706 1549 aa10.74□□□□□ -0.69
EWSR1-220ENST00000493426 SCAF1Q9H7N4 1312 aaKnown RBP10.73□□□□□ -0.69
EWSR1-220ENST00000493426 ACIN1Q9UKV3 1341 aaKnown RBP10.57□□□□□ -0.72
EWSR1-220ENST00000493426 LOC105371045A0A1W2PR82 267 aa10.54□□□□□ -0.72
EWSR1-220ENST00000493426 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
EWSR1-220ENST00000493426 TTBK1Q5TCY1 1321 aaPredicted RBP10.44□□□□□ -0.74
EWSR1-220ENST00000493426 CENPBP07199 599 aaPredicted RBP10.44□□□□□ -0.74
EWSR1-220ENST00000493426 NEUROD1Q13562 356 aa10.41□□□□□ -0.74
EWSR1-220ENST00000493426 RB1CC1Q8TDY2 1594 aa10.4□□□□□ -0.74
EWSR1-220ENST00000493426 NACADO15069 1562 aa10.39□□□□□ -0.75
EWSR1-220ENST00000493426 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
EWSR1-220ENST00000493426 GTF3C3Q9Y5Q9 886 aa10.34□□□□□ -0.75
EWSR1-220ENST00000493426 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
EWSR1-220ENST00000493426 MAPK8IP2Q13387 824 aaPredicted RBP10.32□□□□□ -0.76
EWSR1-220ENST00000493426 CNKSR2Q8WXI2 1034 aa10.29□□□□□ -0.76
EWSR1-220ENST00000493426 DIEXFQ68CQ4 756 aaKnown RBP10.27□□□□□ -0.77
EWSR1-220ENST00000493426 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
EWSR1-220ENST00000493426 DMRT2Q9Y5R5 561 aa10.26□□□□□ -0.77
EWSR1-220ENST00000493426 CLSPNQ9HAW4 1339 aa10.24□□□□□ -0.77
EWSR1-220ENST00000493426 RSF1Q96T23 1441 aaPredicted RBP10.19□□□□□ -0.78
EWSR1-220ENST00000493426 KCNA4P22459 653 aa10.18□□□□□ -0.78
EWSR1-220ENST00000493426 UNC13AQ9UPW8 1703 aa10.17□□□□□ -0.78
EWSR1-220ENST00000493426 CCER1Q8TC90 406 aaPredicted RBP10.17□□□□□ -0.78
EWSR1-220ENST00000493426 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
EWSR1-220ENST00000493426 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
EWSR1-220ENST00000493426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
EWSR1-220ENST00000493426 POTEDQ86YR6 584 aa10.09□□□□□ -0.79
EWSR1-220ENST00000493426 RNF216Q9NWF9 866 aaPredicted RBP10.09□□□□□ -0.79
EWSR1-220ENST00000493426 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
EWSR1-220ENST00000493426 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
EWSR1-220ENST00000493426 SCRIBQ14160 1630 aa10.05□□□□□ -0.8
EWSR1-220ENST00000493426 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
EWSR1-220ENST00000493426 ANP32EQ9BTT0 268 aa10.02□□□□□ -0.81
EWSR1-220ENST00000493426 FAM9AQ8IZU1 332 aaPredicted RBP9.97□□□□□ -0.81
EWSR1-220ENST00000493426 MIER1Q8N108 512 aa9.97□□□□□ -0.81
EWSR1-220ENST00000493426 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
EWSR1-220ENST00000493426 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
EWSR1-220ENST00000493426 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
EWSR1-220ENST00000493426 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
EWSR1-220ENST00000493426 EEA1Q15075 1411 aa9.92□□□□□ -0.82
EWSR1-220ENST00000493426 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
EWSR1-220ENST00000493426 SUPT16HQ9Y5B9 1047 aaKnown RBP9.91□□□□□ -0.82
EWSR1-220ENST00000493426 BAZ1AQ9NRL2 1556 aaPredicted RBP9.9□□□□□ -0.82
EWSR1-220ENST00000493426 EIF4G1Q04637 1599 aaKnown RBP9.89□□□□□ -0.83
EWSR1-220ENST00000493426 DCAF8L1A6NGE4 600 aa9.87□□□□□ -0.83
EWSR1-220ENST00000493426 CEP162Q5TB80 1403 aa9.87□□□□□ -0.83
EWSR1-220ENST00000493426 MROH2BQ7Z745 1585 aa9.85□□□□□ -0.83
EWSR1-220ENST00000493426 CECR2Q9BXF3 1484 aa9.85□□□□□ -0.83
EWSR1-220ENST00000493426 YTHDC1Q96MU7 727 aaKnown RBP9.83□□□□□ -0.84
EWSR1-220ENST00000493426 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
EWSR1-220ENST00000493426 CSRNP3Q8WYN3 585 aa9.77□□□□□ -0.85
EWSR1-220ENST00000493426 SLC4A1APQ9BWU0 796 aaKnown RBP9.77□□□□□ -0.85
EWSR1-220ENST00000493426 SMARCA4P51532 1647 aa9.76□□□□□ -0.85
EWSR1-220ENST00000493426 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
EWSR1-220ENST00000493426 WIZO95785 1651 aa9.74□□□□□ -0.85
EWSR1-220ENST00000493426 GOLGA3Q08378 1498 aa9.74□□□□□ -0.85
EWSR1-220ENST00000493426 MYT1LQ9UL68 1186 aa9.74□□□□□ -0.85
EWSR1-220ENST00000493426 PEG3Q9GZU2 1588 aa9.72□□□□□ -0.85
EWSR1-220ENST00000493426 CCDC88BA6NC98 1476 aa9.71□□□□□ -0.86
EWSR1-220ENST00000493426 DHX57Q6P158 1386 aaKnown RBP9.69□□□□□ -0.86
EWSR1-220ENST00000493426 VPS8Q8N3P4 1428 aa9.68□□□□□ -0.86
EWSR1-220ENST00000493426 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
EWSR1-220ENST00000493426 CUX2O14529 1486 aa9.67□□□□□ -0.86
EWSR1-220ENST00000493426 SOGA1O94964 1423 aa9.67□□□□□ -0.86
EWSR1-220ENST00000493426 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
EWSR1-220ENST00000493426 FANCIQ9NVI1 1328 aa9.66□□□□□ -0.86
EWSR1-220ENST00000493426 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
EWSR1-220ENST00000493426 KIF21BO75037 1637 aa9.66□□□□□ -0.86
EWSR1-220ENST00000493426 CEP164Q9UPV0 1460 aa9.66□□□□□ -0.86
EWSR1-220ENST00000493426 CLIP1P30622 1438 aa9.65□□□□□ -0.87
EWSR1-220ENST00000493426 SMARCA2P51531 1590 aa9.63□□□□□ -0.87
EWSR1-220ENST00000493426 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
EWSR1-220ENST00000493426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.87
EWSR1-220ENST00000493426 ABCC8Q09428 1581 aa9.63□□□□□ -0.87
EWSR1-220ENST00000493426 UBTFP17480 764 aaKnown RBP9.62□□□□□ -0.87
EWSR1-220ENST00000493426 CCER2I3L3R5 266 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms