RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 MAST1Q9Y2H9 1570 aa25.67■■□□□ 1.7
C9orf78-206ENST00000492991 WASHC2CQ9Y4E1 1318 aa25.66■■□□□ 1.7
C9orf78-206ENST00000492991 APLP2Q06481 763 aa25.66■■□□□ 1.7
C9orf78-206ENST00000492991 ZNF142P52746 1687 aaPredicted RBP25.66■■□□□ 1.7
C9orf78-206ENST00000492991 KDM5DQ9BY66 1539 aa25.65■■□□□ 1.7
C9orf78-206ENST00000492991 CEP170BQ9Y4F5 1589 aaPredicted RBP25.65■■□□□ 1.7
C9orf78-206ENST00000492991 MYO3AQ8NEV4 1616 aa25.64■■□□□ 1.7
C9orf78-206ENST00000492991 PZPP20742 1482 aa25.63■■□□□ 1.69
C9orf78-206ENST00000492991 A2ML1A8K2U0 1454 aa25.62■■□□□ 1.69
C9orf78-206ENST00000492991 TCOF1Q13428 1488 aaKnown RBP25.61■■□□□ 1.69
C9orf78-206ENST00000492991 NCKAP5LQ9HCH0 1330 aa25.61■■□□□ 1.69
C9orf78-206ENST00000492991 TNRQ92752 1358 aa25.6■■□□□ 1.69
C9orf78-206ENST00000492991 LTBP4Q8N2S1 1624 aa25.59■■□□□ 1.69
C9orf78-206ENST00000492991 FBXO31Q5XUX0 539 aaPredicted RBP25.59■■□□□ 1.69
C9orf78-206ENST00000492991 IQSEC2Q5JU85 1478 aa25.58■■□□□ 1.69
C9orf78-206ENST00000492991 RNF17Q9BXT8 1623 aaKnown RBP25.55■■□□□ 1.68
C9orf78-206ENST00000492991 DNMT1P26358 1616 aaKnown RBP25.54■■□□□ 1.68
C9orf78-206ENST00000492991 EIF2AK4Q9P2K8 1649 aaKnown RBP25.54■■□□□ 1.68
C9orf78-206ENST00000492991 NLRP1Q9C000 1473 aa25.52■■□□□ 1.68
C9orf78-206ENST00000492991 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
C9orf78-206ENST00000492991 THEMISQ8N1K5 641 aaPredicted RBP25.51■■□□□ 1.67
C9orf78-206ENST00000492991 ABCC5O15440 1437 aa25.51■■□□□ 1.67
C9orf78-206ENST00000492991 SHANK2Q9UPX8 1470 aa25.51■■□□□ 1.67
C9orf78-206ENST00000492991 ABCC3O15438 1527 aa25.48■■□□□ 1.67
C9orf78-206ENST00000492991 ZC3H13Q5T200 1668 aaKnown RBP25.48■■□□□ 1.67
C9orf78-206ENST00000492991 FGD6Q6ZV73 1430 aa25.47■■□□□ 1.67
C9orf78-206ENST00000492991 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
C9orf78-206ENST00000492991 KIF15Q9NS87 1388 aa25.46■■□□□ 1.67
C9orf78-206ENST00000492991 ZNF335Q9H4Z2 1342 aaPredicted RBP25.46■■□□□ 1.67
C9orf78-206ENST00000492991 ANKLE2Q86XL3 938 aa25.45■■□□□ 1.66
C9orf78-206ENST00000492991 ERBINQ96RT1 1412 aa25.45■■□□□ 1.66
C9orf78-206ENST00000492991 DAPK1P53355 1430 aa25.44■■□□□ 1.66
C9orf78-206ENST00000492991 MROH1Q8NDA8 1641 aa25.44■■□□□ 1.66
C9orf78-206ENST00000492991 SPATA31D1Q6ZQQ2 1576 aa25.43■■□□□ 1.66
C9orf78-206ENST00000492991 RRP7BPQ9NSQ0 103 aa25.42■■□□□ 1.66
C9orf78-206ENST00000492991 UGGT1Q9NYU2 1555 aa25.41■■□□□ 1.66
C9orf78-206ENST00000492991 ARHGAP31Q2M1Z3 1444 aa25.4■■□□□ 1.66
C9orf78-206ENST00000492991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.4■■□□□ 1.66
C9orf78-206ENST00000492991 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
C9orf78-206ENST00000492991 CROCC2H7BZ55 1655 aa25.39■■□□□ 1.66
C9orf78-206ENST00000492991 ANKRD30AQ9BXX3 1397 aa25.38■■□□□ 1.65
C9orf78-206ENST00000492991 MED14O60244 1454 aa25.38■■□□□ 1.65
C9orf78-206ENST00000492991 PRDM15P57071 1507 aaPredicted RBP25.37■■□□□ 1.65
C9orf78-206ENST00000492991 NEURL4Q96JN8 1562 aa25.36■■□□□ 1.65
C9orf78-206ENST00000492991 POLR1AO95602 1720 aaPredicted RBP25.35■■□□□ 1.65
C9orf78-206ENST00000492991 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
C9orf78-206ENST00000492991 KANK1Q14678 1352 aa25.32■■□□□ 1.64
C9orf78-206ENST00000492991 NPHP4O75161 1426 aaPredicted RBP25.31■■□□□ 1.64
C9orf78-206ENST00000492991 CPS1P31327 1500 aa25.31■■□□□ 1.64
C9orf78-206ENST00000492991 CEP152O94986 1710 aa25.3■■□□□ 1.64
C9orf78-206ENST00000492991 CHIC2Q9UKJ5 165 aa25.3■■□□□ 1.64
C9orf78-206ENST00000492991 ADGRL2O95490 1459 aa25.29■■□□□ 1.64
C9orf78-206ENST00000492991 UBAP1LF5GYI3 381 aa25.29■■□□□ 1.64
C9orf78-206ENST00000492991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.641e-13■■■□□ 14.9
C9orf78-206ENST00000492991 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
C9orf78-206ENST00000492991 VWDEQ8N2E2 1590 aa25.24■■□□□ 1.63
C9orf78-206ENST00000492991 FAM50AQ14320 339 aaKnown RBP25.23■■□□□ 1.63
C9orf78-206ENST00000492991 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
C9orf78-206ENST00000492991 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
C9orf78-206ENST00000492991 UBR1Q8IWV7 1749 aa25.21■■□□□ 1.63
C9orf78-206ENST00000492991 SLIT1O75093 1534 aa25.21■■□□□ 1.63
C9orf78-206ENST00000492991 TOM1O60784 492 aa25.2■■□□□ 1.62
C9orf78-206ENST00000492991 IQGAP1P46940 1657 aa25.2■■□□□ 1.62
C9orf78-206ENST00000492991 SCAF11Q99590 1463 aaKnown RBP25.19■■□□□ 1.62
C9orf78-206ENST00000492991 TXNDC2Q86VQ3 553 aa25.18■■□□□ 1.62
C9orf78-206ENST00000492991 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
C9orf78-206ENST00000492991 LTKP29376 864 aa25.17■■□□□ 1.62
C9orf78-206ENST00000492991 EID1Q9Y6B2 187 aa25.17■■□□□ 1.62
C9orf78-206ENST00000492991 NOS1P29475 1434 aa25.15■■□□□ 1.62
C9orf78-206ENST00000492991 IDI1Q13907 227 aa25.15■■□□□ 1.62
C9orf78-206ENST00000492991 DISP3Q9P2K9 1392 aa25.15■■□□□ 1.62
C9orf78-206ENST00000492991 SLC52A1Q9NWF4 448 aa25.14■■□□□ 1.62
C9orf78-206ENST00000492991 TMEM2Q9UHN6 1383 aa25.14■■□□□ 1.61
C9orf78-206ENST00000492991 KDM5AP29375 1690 aaKnown RBP25.13■■□□□ 1.61
C9orf78-206ENST00000492991 STAG3Q9UJ98 1225 aa25.12■■□□□ 1.61
C9orf78-206ENST00000492991 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
C9orf78-206ENST00000492991 RPRD2Q5VT52 1461 aaKnown RBP25.11■■□□□ 1.61
C9orf78-206ENST00000492991 ROCK1Q13464 1354 aa25.11■■□□□ 1.61
C9orf78-206ENST00000492991 PIK3C2BO00750 1634 aa25.1■■□□□ 1.61
C9orf78-206ENST00000492991 LRRC7Q96NW7 1537 aa25.07■■□□□ 1.6
C9orf78-206ENST00000492991 SYNMO15061 1565 aa25.06■■□□□ 1.6
C9orf78-206ENST00000492991 PIP4K2BP78356 416 aa25.04■■□□□ 1.6
C9orf78-206ENST00000492991 STRCP1A6NGW2 1772 aa25.03■■□□□ 1.6
C9orf78-206ENST00000492991 HSPA1LP34931 641 aa25.01■■□□□ 1.59
C9orf78-206ENST00000492991 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
C9orf78-206ENST00000492991 TET3O43151 1660 aa25.01■■□□□ 1.59
C9orf78-206ENST00000492991 ADGRB3O60242 1522 aa25■■□□□ 1.59
C9orf78-206ENST00000492991 UNC13BO14795 1591 aa24.99■■□□□ 1.59
C9orf78-206ENST00000492991 ALKQ9UM73 1620 aa24.99■■□□□ 1.59
C9orf78-206ENST00000492991 HDGFP51858 240 aaKnown RBP24.98■■□□□ 1.59
C9orf78-206ENST00000492991 ILDR2Q71H61 639 aa24.98■■□□□ 1.59
C9orf78-206ENST00000492991 KCNA6P17658 529 aa24.96■■□□□ 1.59
C9orf78-206ENST00000492991 GCC2Q8IWJ2 1684 aa24.94■■□□□ 1.58
C9orf78-206ENST00000492991 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
C9orf78-206ENST00000492991 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
C9orf78-206ENST00000492991 NUP155O75694 1391 aa24.91■■□□□ 1.58
C9orf78-206ENST00000492991 SOCS7O14512 581 aa24.9■■□□□ 1.58
C9orf78-206ENST00000492991 IQGAP3Q86VI3 1631 aa24.9■■□□□ 1.58
C9orf78-206ENST00000492991 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.89■■□□□ 1.58
C9orf78-206ENST00000492991 PLEKHG1Q9ULL1 1385 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms