RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 TSPY10P0CW01 314 aa29.12■■■□□ 2.25
CHD1L-209ENST00000492728 DMRT2Q9Y5R5 561 aa29.12■■■□□ 2.25
CHD1L-209ENST00000492728 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
CHD1L-209ENST00000492728 RNF17Q9BXT8 1623 aaKnown RBP29.08■■■□□ 2.25
CHD1L-209ENST00000492728 PZPP20742 1482 aa29.07■■■□□ 2.24
CHD1L-209ENST00000492728 PTPN23Q9H3S7 1636 aa29.05■■■□□ 2.24
CHD1L-209ENST00000492728 FBXO31Q5XUX0 539 aaPredicted RBP29.05■■■□□ 2.24
CHD1L-209ENST00000492728 MROH1Q8NDA8 1641 aa29.05■■■□□ 2.24
CHD1L-209ENST00000492728 LTBP4Q8N2S1 1624 aa29.04■■■□□ 2.24
CHD1L-209ENST00000492728 PLA2R1Q13018 1463 aa29.04■■■□□ 2.24
CHD1L-209ENST00000492728 CROCC2H7BZ55 1655 aa29.03■■■□□ 2.24
CHD1L-209ENST00000492728 NCKAP5LQ9HCH0 1330 aa29.03■■■□□ 2.24
CHD1L-209ENST00000492728 A2ML1A8K2U0 1454 aa29.03■■■□□ 2.24
CHD1L-209ENST00000492728 TCOF1Q13428 1488 aaKnown RBP29.03■■■□□ 2.24
CHD1L-209ENST00000492728 ABCC5O15440 1437 aa29.03■■■□□ 2.24
CHD1L-209ENST00000492728 EIF2AK4Q9P2K8 1649 aaKnown RBP29.02■■■□□ 2.24
CHD1L-209ENST00000492728 DNMT1P26358 1616 aaKnown RBP29.02■■■□□ 2.24
CHD1L-209ENST00000492728 WASHC2CQ9Y4E1 1318 aa29.01■■■□□ 2.23
CHD1L-209ENST00000492728 TNRQ92752 1358 aa29.01■■■□□ 2.23
CHD1L-209ENST00000492728 ABCC3O15438 1527 aa29■■■□□ 2.23
CHD1L-209ENST00000492728 FGD6Q6ZV73 1430 aa29■■■□□ 2.23
CHD1L-209ENST00000492728 SHANK2Q9UPX8 1470 aa28.99■■■□□ 2.23
CHD1L-209ENST00000492728 APLP2Q06481 763 aa28.99■■■□□ 2.23
CHD1L-209ENST00000492728 DUOX2Q9NRD8 1548 aa28.97■■■□□ 2.23
CHD1L-209ENST00000492728 DAPK1P53355 1430 aa28.95■■■□□ 2.23
CHD1L-209ENST00000492728 ZC3H13Q5T200 1668 aaKnown RBP28.95■■■□□ 2.22
CHD1L-209ENST00000492728 KIF15Q9NS87 1388 aa28.93■■■□□ 2.22
CHD1L-209ENST00000492728 PKD2Q13563 968 aa28.91■■■□□ 2.22
CHD1L-209ENST00000492728 CEP152O94986 1710 aa28.91■■■□□ 2.22
CHD1L-209ENST00000492728 SPATA31D1Q6ZQQ2 1576 aa28.89■■■□□ 2.22
CHD1L-209ENST00000492728 NEURL4Q96JN8 1562 aa28.89■■■□□ 2.22
CHD1L-209ENST00000492728 ZNF335Q9H4Z2 1342 aaPredicted RBP28.89■■■□□ 2.21
CHD1L-209ENST00000492728 PRDM15P57071 1507 aaPredicted RBP28.88■■■□□ 2.21
CHD1L-209ENST00000492728 ERBINQ96RT1 1412 aa28.87■■■□□ 2.21
CHD1L-209ENST00000492728 ERVK-7P63135 1459 aa28.86■■■□□ 2.21
CHD1L-209ENST00000492728 NLRP1Q9C000 1473 aa28.86■■■□□ 2.21
CHD1L-209ENST00000492728 RRP7BPQ9NSQ0 103 aa28.86■■■□□ 2.21
CHD1L-209ENST00000492728 POLR1AO95602 1720 aaPredicted RBP28.85■■■□□ 2.21
CHD1L-209ENST00000492728 UGGT1Q9NYU2 1555 aa28.83■■■□□ 2.21
CHD1L-209ENST00000492728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.82■■■□□ 2.2
CHD1L-209ENST00000492728 DEPDC5O75140 1603 aa28.82■■■□□ 2.2
CHD1L-209ENST00000492728 IQSEC2Q5JU85 1478 aa28.81■■■□□ 2.2
CHD1L-209ENST00000492728 CHIC2Q9UKJ5 165 aa28.79■■■□□ 2.2
CHD1L-209ENST00000492728 ADGRL2O95490 1459 aa28.75■■■□□ 2.19
CHD1L-209ENST00000492728 ANKRD30AQ9BXX3 1397 aa28.75■■■□□ 2.19
CHD1L-209ENST00000492728 ARHGAP31Q2M1Z3 1444 aa28.74■■■□□ 2.19
CHD1L-209ENST00000492728 VWDEQ8N2E2 1590 aa28.73■■■□□ 2.19
CHD1L-209ENST00000492728 CFAP65Q6ZU64 1925 aaKnown RBP28.71■■■□□ 2.19
CHD1L-209ENST00000492728 THEMISQ8N1K5 641 aaPredicted RBP28.71■■■□□ 2.19
CHD1L-209ENST00000492728 MED14O60244 1454 aa28.71■■■□□ 2.19
CHD1L-209ENST00000492728 UBR1Q8IWV7 1749 aa28.7■■■□□ 2.19
CHD1L-209ENST00000492728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.7■■■□□ 2.182e-9■■□□□ 12.2
CHD1L-209ENST00000492728 FAM50AQ14320 339 aaKnown RBP28.69■■■□□ 2.18
CHD1L-209ENST00000492728 ANKLE2Q86XL3 938 aa28.69■■■□□ 2.18
CHD1L-209ENST00000492728 LMTK2Q8IWU2 1503 aa28.69■■■□□ 2.18
CHD1L-209ENST00000492728 NPHP4O75161 1426 aaPredicted RBP28.69■■■□□ 2.18
CHD1L-209ENST00000492728 IQGAP1P46940 1657 aa28.64■■■□□ 2.18
CHD1L-209ENST00000492728 KANK1Q14678 1352 aa28.62■■■□□ 2.17
CHD1L-209ENST00000492728 EFCAB6Q5THR3 1501 aa28.61■■■□□ 2.17
CHD1L-209ENST00000492728 PIK3C2BO00750 1634 aa28.61■■■□□ 2.17
CHD1L-209ENST00000492728 ARHGAP23Q9P227 1491 aa28.6■■■□□ 2.17
CHD1L-209ENST00000492728 CPS1P31327 1500 aa28.59■■■□□ 2.17
CHD1L-209ENST00000492728 SYNMO15061 1565 aa28.59■■■□□ 2.17
CHD1L-209ENST00000492728 ANKRD50Q9ULJ7 1429 aa28.59■■■□□ 2.17
CHD1L-209ENST00000492728 SLIT1O75093 1534 aa28.58■■■□□ 2.17
CHD1L-209ENST00000492728 UBAP1LF5GYI3 381 aa28.56■■■□□ 2.16
CHD1L-209ENST00000492728 SCAF11Q99590 1463 aaKnown RBP28.56■■■□□ 2.16
CHD1L-209ENST00000492728 STRCP1A6NGW2 1772 aa28.55■■■□□ 2.16
CHD1L-209ENST00000492728 NOS1P29475 1434 aa28.54■■■□□ 2.16
CHD1L-209ENST00000492728 LTKP29376 864 aa28.54■■■□□ 2.16
CHD1L-209ENST00000492728 PPARGC1BQ86YN6 1023 aaKnown RBP28.53■■■□□ 2.16
CHD1L-209ENST00000492728 UNC13BO14795 1591 aa28.5■■■□□ 2.15
CHD1L-209ENST00000492728 ALKQ9UM73 1620 aa28.48■■■□□ 2.15
CHD1L-209ENST00000492728 IDI1Q13907 227 aa28.48■■■□□ 2.15
CHD1L-209ENST00000492728 TMEM2Q9UHN6 1383 aa28.48■■■□□ 2.15
CHD1L-209ENST00000492728 KDM5AP29375 1690 aaKnown RBP28.47■■■□□ 2.15
CHD1L-209ENST00000492728 TET3O43151 1660 aa28.46■■■□□ 2.15
CHD1L-209ENST00000492728 ROCK1Q13464 1354 aa28.46■■■□□ 2.15
CHD1L-209ENST00000492728 ADGRB3O60242 1522 aa28.45■■■□□ 2.15
CHD1L-209ENST00000492728 TXNDC2Q86VQ3 553 aa28.45■■■□□ 2.14
CHD1L-209ENST00000492728 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
CHD1L-209ENST00000492728 RPRD2Q5VT52 1461 aaKnown RBP28.43■■■□□ 2.14
CHD1L-209ENST00000492728 GCC2Q8IWJ2 1684 aa28.4■■■□□ 2.14
CHD1L-209ENST00000492728 DISP3Q9P2K9 1392 aa28.39■■■□□ 2.14
CHD1L-209ENST00000492728 STAG3Q9UJ98 1225 aa28.38■■■□□ 2.13
CHD1L-209ENST00000492728 ITGAEP38570 1179 aa28.37■■■□□ 2.13
CHD1L-209ENST00000492728 IQGAP3Q86VI3 1631 aa28.36■■■□□ 2.13
CHD1L-209ENST00000492728 E9PCH4 1651 aa28.36■■■□□ 2.13
CHD1L-209ENST00000492728 EID1Q9Y6B2 187 aa28.36■■■□□ 2.13
CHD1L-209ENST00000492728 PIP4K2BP78356 416 aa28.35■■■□□ 2.13
CHD1L-209ENST00000492728 TOM1O60784 492 aa28.33■■■□□ 2.13
CHD1L-209ENST00000492728 SLC52A1Q9NWF4 448 aa28.33■■■□□ 2.13
CHD1L-209ENST00000492728 SCAF1Q9H7N4 1312 aaKnown RBP28.33■■■□□ 2.13
CHD1L-209ENST00000492728 MYO5BQ9ULV0 1848 aa28.32■■■□□ 2.12
CHD1L-209ENST00000492728 HSPA1LP34931 641 aa28.31■■■□□ 2.12
CHD1L-209ENST00000492728 XIRP1Q702N8 1843 aaKnown RBP28.3■■■□□ 2.12
CHD1L-209ENST00000492728 TMEM131LA2VDJ0 1609 aa28.3■■■□□ 2.12
CHD1L-209ENST00000492728 ZFYVE9O95405 1425 aa28.3■■■□□ 2.12
CHD1L-209ENST00000492728 ILDR2Q71H61 639 aa28.3■■■□□ 2.12
CHD1L-209ENST00000492728 RRBP1Q9P2E9 1410 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms