RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 KANK4Q5T7N3 995 aaPredicted RBP27.43■■□□□ 1.98
PBX3-209ENST00000491787 PKD2Q13563 968 aa27.42■■□□□ 1.98
PBX3-209ENST00000491787 NCKAP5LQ9HCH0 1330 aa27.41■■□□□ 1.98
PBX3-209ENST00000491787 TCOF1Q13428 1488 aaKnown RBP27.41■■□□□ 1.98
PBX3-209ENST00000491787 IQSEC2Q5JU85 1478 aa27.39■■□□□ 1.98
PBX3-209ENST00000491787 MAST1Q9Y2H9 1570 aa27.39■■□□□ 1.97
PBX3-209ENST00000491787 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
PBX3-209ENST00000491787 KDM5DQ9BY66 1539 aa27.38■■□□□ 1.97
PBX3-209ENST00000491787 MIA2Q96PC5 1412 aa27.38■■□□□ 1.97
PBX3-209ENST00000491787 PZPP20742 1482 aa27.38■■□□□ 1.97
PBX3-209ENST00000491787 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
PBX3-209ENST00000491787 MYOM3Q5VTT5 1437 aa27.34■■□□□ 1.97
PBX3-209ENST00000491787 FBXO31Q5XUX0 539 aaPredicted RBP27.34■■□□□ 1.97
PBX3-209ENST00000491787 WASHC2CQ9Y4E1 1318 aa27.34■■□□□ 1.97
PBX3-209ENST00000491787 TNRQ92752 1358 aa27.33■■□□□ 1.97
PBX3-209ENST00000491787 RNF17Q9BXT8 1623 aaKnown RBP27.3■■□□□ 1.96
PBX3-209ENST00000491787 ZNF335Q9H4Z2 1342 aaPredicted RBP27.27■■□□□ 1.96
PBX3-209ENST00000491787 EIF2AK4Q9P2K8 1649 aaKnown RBP27.27■■□□□ 1.96
PBX3-209ENST00000491787 ABCC3O15438 1527 aa27.23■■□□□ 1.95
PBX3-209ENST00000491787 NLRP1Q9C000 1473 aa27.23■■□□□ 1.95
PBX3-209ENST00000491787 ZC3H13Q5T200 1668 aaKnown RBP27.22■■□□□ 1.95
PBX3-209ENST00000491787 POLR1AO95602 1720 aaPredicted RBP27.21■■□□□ 1.95
PBX3-209ENST00000491787 MROH1Q8NDA8 1641 aa27.21■■□□□ 1.95
PBX3-209ENST00000491787 THEMISQ8N1K5 641 aaPredicted RBP27.2■■□□□ 1.94
PBX3-209ENST00000491787 NEURL4Q96JN8 1562 aa27.2■■□□□ 1.94
PBX3-209ENST00000491787 DUOX2Q9NRD8 1548 aa27.19■■□□□ 1.94
PBX3-209ENST00000491787 SPATA31D1Q6ZQQ2 1576 aa27.18■■□□□ 1.94
PBX3-209ENST00000491787 ABCC5O15440 1437 aa27.17■■□□□ 1.94
PBX3-209ENST00000491787 SHANK2Q9UPX8 1470 aa27.17■■□□□ 1.94
PBX3-209ENST00000491787 PTPN23Q9H3S7 1636 aa27.16■■□□□ 1.94
PBX3-209ENST00000491787 APLP2Q06481 763 aa27.15■■□□□ 1.94
PBX3-209ENST00000491787 ANKLE2Q86XL3 938 aa27.15■■□□□ 1.94
PBX3-209ENST00000491787 CROCC2H7BZ55 1655 aa27.14■■□□□ 1.94
PBX3-209ENST00000491787 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.94
PBX3-209ENST00000491787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.14■■□□□ 1.94
PBX3-209ENST00000491787 MED14O60244 1454 aa27.13■■□□□ 1.93
PBX3-209ENST00000491787 DEPDC5O75140 1603 aa27.13■■□□□ 1.93
PBX3-209ENST00000491787 CFAP65Q6ZU64 1925 aaKnown RBP27.13■■□□□ 1.93
PBX3-209ENST00000491787 ERVK-7P63135 1459 aa27.12■■□□□ 1.93
PBX3-209ENST00000491787 KIF15Q9NS87 1388 aa27.11■■□□□ 1.93
PBX3-209ENST00000491787 CEP152O94986 1710 aa27.1■■□□□ 1.93
PBX3-209ENST00000491787 FGD6Q6ZV73 1430 aa27.09■■□□□ 1.93
PBX3-209ENST00000491787 ERBINQ96RT1 1412 aa27.09■■□□□ 1.93
PBX3-209ENST00000491787 DAPK1P53355 1430 aa27.08■■□□□ 1.93
PBX3-209ENST00000491787 UBAP1LF5GYI3 381 aa27.08■■□□□ 1.93
PBX3-209ENST00000491787 ARHGAP31Q2M1Z3 1444 aa27.07■■□□□ 1.92
PBX3-209ENST00000491787 CPS1P31327 1500 aa27.07■■□□□ 1.92
PBX3-209ENST00000491787 PRDM15P57071 1507 aaPredicted RBP27.07■■□□□ 1.92
PBX3-209ENST00000491787 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
PBX3-209ENST00000491787 VWDEQ8N2E2 1590 aa27.05■■□□□ 1.92
PBX3-209ENST00000491787 NPHP4O75161 1426 aaPredicted RBP27.05■■□□□ 1.92
PBX3-209ENST00000491787 UBR1Q8IWV7 1749 aa27.02■■□□□ 1.92
PBX3-209ENST00000491787 DISP3Q9P2K9 1392 aa27.01■■□□□ 1.91
PBX3-209ENST00000491787 IQGAP1P46940 1657 aa27.01■■□□□ 1.91
PBX3-209ENST00000491787 ANKRD30AQ9BXX3 1397 aa26.97■■□□□ 1.91
PBX3-209ENST00000491787 LMTK2Q8IWU2 1503 aa26.95■■□□□ 1.91
PBX3-209ENST00000491787 ARHGAP23Q9P227 1491 aa26.95■■□□□ 1.91
PBX3-209ENST00000491787 ILDR2Q71H61 639 aa26.94■■□□□ 1.9
PBX3-209ENST00000491787 SLIT1O75093 1534 aa26.94■■□□□ 1.9
PBX3-209ENST00000491787 CHIC2Q9UKJ5 165 aa26.93■■□□□ 1.9
PBX3-209ENST00000491787 KANK1Q14678 1352 aa26.93■■□□□ 1.9
PBX3-209ENST00000491787 ADGRL2O95490 1459 aa26.93■■□□□ 1.9
PBX3-209ENST00000491787 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
PBX3-209ENST00000491787 TOM1O60784 492 aa26.92■■□□□ 1.9
PBX3-209ENST00000491787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.92■■□□□ 1.9
PBX3-209ENST00000491787 SCAF11Q99590 1463 aaKnown RBP26.9■■□□□ 1.9
PBX3-209ENST00000491787 LTKP29376 864 aa26.9■■□□□ 1.9
PBX3-209ENST00000491787 KDM5AP29375 1690 aaKnown RBP26.88■■□□□ 1.89
PBX3-209ENST00000491787 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
PBX3-209ENST00000491787 TXNDC2Q86VQ3 553 aa26.86■■□□□ 1.89
PBX3-209ENST00000491787 PIK3C2BO00750 1634 aa26.86■■□□□ 1.89
PBX3-209ENST00000491787 LRRC7Q96NW7 1537 aa26.85■■□□□ 1.89
PBX3-209ENST00000491787 NOS1P29475 1434 aa26.83■■□□□ 1.89
PBX3-209ENST00000491787 IDI1Q13907 227 aa26.83■■□□□ 1.89
PBX3-209ENST00000491787 TMEM2Q9UHN6 1383 aa26.83■■□□□ 1.88
PBX3-209ENST00000491787 HSPA1LP34931 641 aa26.82■■□□□ 1.88
PBX3-209ENST00000491787 SYNMO15061 1565 aa26.81■■□□□ 1.88
PBX3-209ENST00000491787 PIP4K2BP78356 416 aa26.81■■□□□ 1.88
PBX3-209ENST00000491787 EID1Q9Y6B2 187 aa26.81■■□□□ 1.88
PBX3-209ENST00000491787 EFCAB6Q5THR3 1501 aa26.8■■□□□ 1.88
PBX3-209ENST00000491787 FAM50AQ14320 339 aaKnown RBP26.8■■□□□ 1.88
PBX3-209ENST00000491787 SOCS7O14512 581 aa26.79■■□□□ 1.88
PBX3-209ENST00000491787 ANKRD50Q9ULJ7 1429 aa26.79■■□□□ 1.88
PBX3-209ENST00000491787 SCAF1Q9H7N4 1312 aaKnown RBP26.76■■□□□ 1.87
PBX3-209ENST00000491787 SLC52A1Q9NWF4 448 aa26.76■■□□□ 1.87
PBX3-209ENST00000491787 RPRD2Q5VT52 1461 aaKnown RBP26.74■■□□□ 1.87
PBX3-209ENST00000491787 STAG3Q9UJ98 1225 aa26.74■■□□□ 1.87
PBX3-209ENST00000491787 XIRP1Q702N8 1843 aaKnown RBP26.73■■□□□ 1.87
PBX3-209ENST00000491787 TET3O43151 1660 aa26.72■■□□□ 1.87
PBX3-209ENST00000491787 ADGRB3O60242 1522 aa26.7■■□□□ 1.86
PBX3-209ENST00000491787 ROCK1Q13464 1354 aa26.69■■□□□ 1.86
PBX3-209ENST00000491787 UNC13BO14795 1591 aa26.67■■□□□ 1.86
PBX3-209ENST00000491787 GCC2Q8IWJ2 1684 aa26.65■■□□□ 1.86
PBX3-209ENST00000491787 MED1Q15648 1581 aaPredicted RBP26.64■■□□□ 1.86
PBX3-209ENST00000491787 KCNA6P17658 529 aa26.64■■□□□ 1.86
PBX3-209ENST00000491787 MYO5BQ9ULV0 1848 aa26.62■■□□□ 1.85
PBX3-209ENST00000491787 ZFYVE9O95405 1425 aa26.61■■□□□ 1.85
PBX3-209ENST00000491787 SLC26A8Q96RN1 970 aa26.6■■□□□ 1.85
PBX3-209ENST00000491787 TMEM131LA2VDJ0 1609 aa26.6■■□□□ 1.85
PBX3-209ENST00000491787 E9PCH4 1651 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms