RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 KIF15Q9NS87 1388 aa24.66■■□□□ 1.54
PFDN6-207ENST00000491382 KDM5DQ9BY66 1539 aa24.66■■□□□ 1.54
PFDN6-207ENST00000491382 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
PFDN6-207ENST00000491382 ANKRD30AQ9BXX3 1397 aa24.65■■□□□ 1.54
PFDN6-207ENST00000491382 NPATQ14207 1427 aa24.62■■□□□ 1.53
PFDN6-207ENST00000491382 UHRF1BP1Q6BDS2 1440 aa24.62■■□□□ 1.53
PFDN6-207ENST00000491382 ERBINQ96RT1 1412 aa24.62■■□□□ 1.53
PFDN6-207ENST00000491382 RRP7BPQ9NSQ0 103 aa24.61■■□□□ 1.53
PFDN6-207ENST00000491382 ZC3H13Q5T200 1668 aaKnown RBP24.61■■□□□ 1.53
PFDN6-207ENST00000491382 ADGRL2O95490 1459 aa24.6■■□□□ 1.53
PFDN6-207ENST00000491382 CHIC2Q9UKJ5 165 aa24.6■■□□□ 1.53
PFDN6-207ENST00000491382 WASHC2CQ9Y4E1 1318 aa24.59■■□□□ 1.53
PFDN6-207ENST00000491382 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
PFDN6-207ENST00000491382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.55■■□□□ 1.52
PFDN6-207ENST00000491382 MROH1Q8NDA8 1641 aa24.55■■□□□ 1.52
PFDN6-207ENST00000491382 PTPRKQ15262 1439 aa24.54■■□□□ 1.52
PFDN6-207ENST00000491382 HSPA2P54652 639 aa24.54■■□□□ 1.52
PFDN6-207ENST00000491382 PRDM15P57071 1507 aaPredicted RBP24.53■■□□□ 1.52
PFDN6-207ENST00000491382 DEPDC5O75140 1603 aa24.53■■□□□ 1.52
PFDN6-207ENST00000491382 ABCC3O15438 1527 aa24.52■■□□□ 1.52
PFDN6-207ENST00000491382 MYO3AQ8NEV4 1616 aa24.52■■□□□ 1.52
PFDN6-207ENST00000491382 PZPP20742 1482 aa24.51■■□□□ 1.51
PFDN6-207ENST00000491382 CEP152O94986 1710 aa24.51■■□□□ 1.51
PFDN6-207ENST00000491382 ZNF142P52746 1687 aaPredicted RBP24.49■■□□□ 1.51
PFDN6-207ENST00000491382 CAMSAP1Q5T5Y3 1602 aa24.48■■□□□ 1.51
PFDN6-207ENST00000491382 RRBP1Q9P2E9 1410 aaKnown RBP24.48■■□□□ 1.51
PFDN6-207ENST00000491382 ROCK1Q13464 1354 aa24.46■■□□□ 1.51
PFDN6-207ENST00000491382 KANK1Q14678 1352 aa24.46■■□□□ 1.51
PFDN6-207ENST00000491382 ANKRD50Q9ULJ7 1429 aa24.45■■□□□ 1.51
PFDN6-207ENST00000491382 CEP170BQ9Y4F5 1589 aaPredicted RBP24.45■■□□□ 1.5
PFDN6-207ENST00000491382 ITGAEP38570 1179 aa24.44■■□□□ 1.5
PFDN6-207ENST00000491382 TNRQ92752 1358 aa24.42■■□□□ 1.5
PFDN6-207ENST00000491382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.42■■□□□ 1.52e-9■□□□□ 9.3
PFDN6-207ENST00000491382 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
PFDN6-207ENST00000491382 STRCQ7RTU9 1775 aa24.39■■□□□ 1.5
PFDN6-207ENST00000491382 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
PFDN6-207ENST00000491382 SPATA31D1Q6ZQQ2 1576 aa24.38■■□□□ 1.49
PFDN6-207ENST00000491382 VWDEQ8N2E2 1590 aa24.38■■□□□ 1.49
PFDN6-207ENST00000491382 ARHGAP31Q2M1Z3 1444 aa24.37■■□□□ 1.49
PFDN6-207ENST00000491382 LMTK2Q8IWU2 1503 aa24.37■■□□□ 1.49
PFDN6-207ENST00000491382 ERVK-7P63135 1459 aa24.36■■□□□ 1.49
PFDN6-207ENST00000491382 NLRP1Q9C000 1473 aa24.36■■□□□ 1.49
PFDN6-207ENST00000491382 UNC13BO14795 1591 aa24.35■■□□□ 1.49
PFDN6-207ENST00000491382 DMRT2Q9Y5R5 561 aa24.35■■□□□ 1.49
PFDN6-207ENST00000491382 CFAP65Q6ZU64 1925 aaKnown RBP24.35■■□□□ 1.49
PFDN6-207ENST00000491382 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
PFDN6-207ENST00000491382 EFCAB6Q5THR3 1501 aa24.31■■□□□ 1.48
PFDN6-207ENST00000491382 UGGT1Q9NYU2 1555 aa24.29■■□□□ 1.48
PFDN6-207ENST00000491382 TET3O43151 1660 aa24.28■■□□□ 1.48
PFDN6-207ENST00000491382 GCC2Q8IWJ2 1684 aa24.27■■□□□ 1.48
PFDN6-207ENST00000491382 PTPRTO14522 1441 aa24.27■■□□□ 1.48
PFDN6-207ENST00000491382 IQGAP3Q86VI3 1631 aa24.25■■□□□ 1.47
PFDN6-207ENST00000491382 RPRD2Q5VT52 1461 aaKnown RBP24.25■■□□□ 1.47
PFDN6-207ENST00000491382 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
PFDN6-207ENST00000491382 PKD2Q13563 968 aa24.24■■□□□ 1.47
PFDN6-207ENST00000491382 THEMISQ8N1K5 641 aaPredicted RBP24.23■■□□□ 1.47
PFDN6-207ENST00000491382 UBR1Q8IWV7 1749 aa24.21■■□□□ 1.47
PFDN6-207ENST00000491382 NCKAP5LQ9HCH0 1330 aa24.2■■□□□ 1.46
PFDN6-207ENST00000491382 NAIPQ13075 1403 aa24.19■■□□□ 1.46
PFDN6-207ENST00000491382 NUP155O75694 1391 aa24.19■■□□□ 1.46
PFDN6-207ENST00000491382 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
PFDN6-207ENST00000491382 NOS1P29475 1434 aa24.18■■□□□ 1.46
PFDN6-207ENST00000491382 PIK3C2BO00750 1634 aa24.17■■□□□ 1.46
PFDN6-207ENST00000491382 SYNMO15061 1565 aa24.17■■□□□ 1.46
PFDN6-207ENST00000491382 E9PCH4 1651 aa24.17■■□□□ 1.46
PFDN6-207ENST00000491382 KDM5AP29375 1690 aaKnown RBP24.16■■□□□ 1.46
PFDN6-207ENST00000491382 ANKLE2Q86XL3 938 aa24.14■■□□□ 1.45
PFDN6-207ENST00000491382 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
PFDN6-207ENST00000491382 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
PFDN6-207ENST00000491382 SLC52A1Q9NWF4 448 aa24.11■■□□□ 1.45
PFDN6-207ENST00000491382 STAG3Q9UJ98 1225 aa24.11■■□□□ 1.45
PFDN6-207ENST00000491382 IDI1Q13907 227 aa24.09■■□□□ 1.45
PFDN6-207ENST00000491382 ADGRB3O60242 1522 aa24.09■■□□□ 1.45
PFDN6-207ENST00000491382 SLIT1O75093 1534 aa24.09■■□□□ 1.45
PFDN6-207ENST00000491382 MED14O60244 1454 aa24.07■■□□□ 1.44
PFDN6-207ENST00000491382 IQGAP1P46940 1657 aa24.07■■□□□ 1.44
PFDN6-207ENST00000491382 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
PFDN6-207ENST00000491382 NPHP4O75161 1426 aaPredicted RBP24.06■■□□□ 1.44
PFDN6-207ENST00000491382 CERKQ8TCT0 537 aa24.05■■□□□ 1.44
PFDN6-207ENST00000491382 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
PFDN6-207ENST00000491382 SPHKAPQ2M3C7 1700 aa24.04■■□□□ 1.44
PFDN6-207ENST00000491382 TRIM52Q96A61 297 aa24.03■■□□□ 1.44
PFDN6-207ENST00000491382 TMEM2Q9UHN6 1383 aa24.03■■□□□ 1.44
PFDN6-207ENST00000491382 LTBP4Q8N2S1 1624 aa24.02■■□□□ 1.44
PFDN6-207ENST00000491382 EID1Q9Y6B2 187 aa24.02■■□□□ 1.44
PFDN6-207ENST00000491382 TXNDC2Q86VQ3 553 aa24■■□□□ 1.43
PFDN6-207ENST00000491382 MYO5BQ9ULV0 1848 aa24■■□□□ 1.43
PFDN6-207ENST00000491382 TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
PFDN6-207ENST00000491382 FBXO41Q8TF61 875 aa23.99■■□□□ 1.43
PFDN6-207ENST00000491382 ZNF335Q9H4Z2 1342 aaPredicted RBP23.99■■□□□ 1.43
PFDN6-207ENST00000491382 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
PFDN6-207ENST00000491382 LTKP29376 864 aa23.95■■□□□ 1.42
PFDN6-207ENST00000491382 IQSEC2Q5JU85 1478 aa23.94■■□□□ 1.42
PFDN6-207ENST00000491382 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
PFDN6-207ENST00000491382 SLC4A1APQ9BWU0 796 aaKnown RBP23.93■■□□□ 1.42
PFDN6-207ENST00000491382 TRPM2O94759 1503 aa23.93■■□□□ 1.42
PFDN6-207ENST00000491382 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
PFDN6-207ENST00000491382 CPS1P31327 1500 aa23.92■■□□□ 1.42
PFDN6-207ENST00000491382 HDGFP51858 240 aaKnown RBP23.91■■□□□ 1.42
PFDN6-207ENST00000491382 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms