RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 PSPHP1O15172 72 aa5.81□□□□□ -1.48
PFDN6-207ENST00000491382 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
PFDN6-207ENST00000491382 K7ERS5 55 aa5.79□□□□□ -1.48
PFDN6-207ENST00000491382 MT1GP13640 62 aa5.78□□□□□ -1.48
PFDN6-207ENST00000491382 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
PFDN6-207ENST00000491382 MT1LQ93083 61 aa5.7□□□□□ -1.5
PFDN6-207ENST00000491382 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
PFDN6-207ENST00000491382 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
PFDN6-207ENST00000491382 MT1MQ8N339 61 aa5.66□□□□□ -1.5
PFDN6-207ENST00000491382 A6NED7 52 aa5.64□□□□□ -1.51
PFDN6-207ENST00000491382 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
PFDN6-207ENST00000491382 RPS28P62857 69 aaKnown RBP5.61□□□□□ -1.51
PFDN6-207ENST00000491382 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
PFDN6-207ENST00000491382 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
PFDN6-207ENST00000491382 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
PFDN6-207ENST00000491382 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
PFDN6-207ENST00000491382 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
PFDN6-207ENST00000491382 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
PFDN6-207ENST00000491382 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
PFDN6-207ENST00000491382 ROMO1P60602 79 aa5.37□□□□□ -1.55
PFDN6-207ENST00000491382 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
PFDN6-207ENST00000491382 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
PFDN6-207ENST00000491382 MT4P47944 62 aa5.33□□□□□ -1.56
PFDN6-207ENST00000491382 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
PFDN6-207ENST00000491382 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
PFDN6-207ENST00000491382 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
PFDN6-207ENST00000491382 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
PFDN6-207ENST00000491382 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
PFDN6-207ENST00000491382 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
PFDN6-207ENST00000491382 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
PFDN6-207ENST00000491382 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
PFDN6-207ENST00000491382 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
PFDN6-207ENST00000491382 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
PFDN6-207ENST00000491382 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
PFDN6-207ENST00000491382 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
PFDN6-207ENST00000491382 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
PFDN6-207ENST00000491382 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
PFDN6-207ENST00000491382 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
PFDN6-207ENST00000491382 MT1AP04731 61 aa4.87□□□□□ -1.63
PFDN6-207ENST00000491382 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
PFDN6-207ENST00000491382 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
PFDN6-207ENST00000491382 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
PFDN6-207ENST00000491382 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
PFDN6-207ENST00000491382 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
PFDN6-207ENST00000491382 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
PFDN6-207ENST00000491382 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
PFDN6-207ENST00000491382 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
PFDN6-207ENST00000491382 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
PFDN6-207ENST00000491382 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
PFDN6-207ENST00000491382 MT3P25713 68 aa4.47□□□□□ -1.69
PFDN6-207ENST00000491382 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
PFDN6-207ENST00000491382 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
PFDN6-207ENST00000491382 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
PFDN6-207ENST00000491382 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
PFDN6-207ENST00000491382 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
PFDN6-207ENST00000491382 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
PFDN6-207ENST00000491382 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
PFDN6-207ENST00000491382 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
PFDN6-207ENST00000491382 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
PFDN6-207ENST00000491382 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
PFDN6-207ENST00000491382 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
PFDN6-207ENST00000491382 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
PFDN6-207ENST00000491382 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
PFDN6-207ENST00000491382 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
PFDN6-207ENST00000491382 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
PFDN6-207ENST00000491382 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
PFDN6-207ENST00000491382 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
PFDN6-207ENST00000491382 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
PFDN6-207ENST00000491382 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
PFDN6-207ENST00000491382 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
PFDN6-207ENST00000491382 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
PFDN6-207ENST00000491382 INE1O15225 51 aa2.99□□□□□ -1.93
PFDN6-207ENST00000491382 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
PFDN6-207ENST00000491382 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
PFDN6-207ENST00000491382 PRM1P04553 51 aa2.73□□□□□ -1.97
PFDN6-207ENST00000491382 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
PFDN6-207ENST00000491382 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
PFDN6-207ENST00000491382 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms