RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 NISCHQ9Y2I1 1504 aa39.08■■■■□ 3.85
PFDN6-207ENST00000491382 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
PFDN6-207ENST00000491382 ABCC9O60706 1549 aa34.13■■■■□ 3.05
PFDN6-207ENST00000491382 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
PFDN6-207ENST00000491382 NACADO15069 1562 aa32.78■■■□□ 2.84
PFDN6-207ENST00000491382 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
PFDN6-207ENST00000491382 MYO15BQ96JP2 1530 aa32.54■■■□□ 2.8
PFDN6-207ENST00000491382 ZCCHC6Q5VYS8 1495 aaKnown RBP32.54■■■□□ 2.8
PFDN6-207ENST00000491382 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
PFDN6-207ENST00000491382 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
PFDN6-207ENST00000491382 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
PFDN6-207ENST00000491382 BICRAQ9NZM4 1560 aa31.8■■■□□ 2.68
PFDN6-207ENST00000491382 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
PFDN6-207ENST00000491382 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
PFDN6-207ENST00000491382 DNAJC5BQ9UF47 199 aa31.32■■■□□ 2.6
PFDN6-207ENST00000491382 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
PFDN6-207ENST00000491382 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
PFDN6-207ENST00000491382 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
PFDN6-207ENST00000491382 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
PFDN6-207ENST00000491382 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
PFDN6-207ENST00000491382 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
PFDN6-207ENST00000491382 NCAPD3P42695 1498 aa30.2■■■□□ 2.43
PFDN6-207ENST00000491382 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
PFDN6-207ENST00000491382 HMGXB3Q12766 1538 aa30.09■■■□□ 2.41
PFDN6-207ENST00000491382 MROH2BQ7Z745 1585 aa30.09■■■□□ 2.41
PFDN6-207ENST00000491382 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
PFDN6-207ENST00000491382 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
PFDN6-207ENST00000491382 WIZO95785 1651 aa29.79■■■□□ 2.36
PFDN6-207ENST00000491382 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
PFDN6-207ENST00000491382 TOP2AP11388 1531 aaKnown RBP29.49■■■□□ 2.31
PFDN6-207ENST00000491382 NESP48681 1621 aa29.49■■■□□ 2.31
PFDN6-207ENST00000491382 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
PFDN6-207ENST00000491382 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
PFDN6-207ENST00000491382 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
PFDN6-207ENST00000491382 PDS5BQ9NTI5 1447 aa29.26■■■□□ 2.27
PFDN6-207ENST00000491382 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
PFDN6-207ENST00000491382 CUX2O14529 1486 aa29.21■■■□□ 2.27
PFDN6-207ENST00000491382 CFTRP13569 1480 aa29.12■■■□□ 2.25
PFDN6-207ENST00000491382 THOC2Q8NI27 1593 aaKnown RBP29.12■■■□□ 2.25
PFDN6-207ENST00000491382 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
PFDN6-207ENST00000491382 PRDM2Q13029 1718 aa29.01■■■□□ 2.23
PFDN6-207ENST00000491382 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
PFDN6-207ENST00000491382 FANCD2Q9BXW9 1451 aa28.99■■■□□ 2.23
PFDN6-207ENST00000491382 MRC2Q9UBG0 1479 aa28.96■■■□□ 2.23
PFDN6-207ENST00000491382 WDR62O43379 1518 aa28.88■■■□□ 2.21
PFDN6-207ENST00000491382 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
PFDN6-207ENST00000491382 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
PFDN6-207ENST00000491382 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
PFDN6-207ENST00000491382 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
PFDN6-207ENST00000491382 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
PFDN6-207ENST00000491382 DNAJC5Q9H3Z4 198 aa28.42■■■□□ 2.14
PFDN6-207ENST00000491382 IFT140Q96RY7 1462 aa28.38■■■□□ 2.13
PFDN6-207ENST00000491382 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.11
PFDN6-207ENST00000491382 CUX1P39880 1505 aa28.24■■■□□ 2.11
PFDN6-207ENST00000491382 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
PFDN6-207ENST00000491382 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
PFDN6-207ENST00000491382 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
PFDN6-207ENST00000491382 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
PFDN6-207ENST00000491382 SOGA1O94964 1423 aa28.14■■■□□ 2.1
PFDN6-207ENST00000491382 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
PFDN6-207ENST00000491382 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
PFDN6-207ENST00000491382 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.08
PFDN6-207ENST00000491382 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
PFDN6-207ENST00000491382 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
PFDN6-207ENST00000491382 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
PFDN6-207ENST00000491382 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
PFDN6-207ENST00000491382 TDRD9Q8NDG6 1382 aaKnown RBP27.97■■■□□ 2.07
PFDN6-207ENST00000491382 OSCARQ8IYS5 282 aa27.94■■■□□ 2.06
PFDN6-207ENST00000491382 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
PFDN6-207ENST00000491382 GRIN2BQ13224 1484 aa27.85■■■□□ 2.05
PFDN6-207ENST00000491382 CHD1O14646 1710 aa27.85■■■□□ 2.05
PFDN6-207ENST00000491382 PBRM1Q86U86 1689 aa27.84■■■□□ 2.05
PFDN6-207ENST00000491382 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
PFDN6-207ENST00000491382 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
PFDN6-207ENST00000491382 SNAPC4Q5SXM2 1469 aa27.82■■■□□ 2.04
PFDN6-207ENST00000491382 MAGI1Q96QZ7 1491 aaPredicted RBP27.8■■■□□ 2.04
PFDN6-207ENST00000491382 FBLN2P98095 1184 aa27.75■■■□□ 2.03
PFDN6-207ENST00000491382 SYNJ2O15056 1496 aa27.69■■■□□ 2.02
PFDN6-207ENST00000491382 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
PFDN6-207ENST00000491382 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
PFDN6-207ENST00000491382 ADAMTS12P58397 1594 aa27.57■■■□□ 2
PFDN6-207ENST00000491382 RIMBP3CA6NJZ7 1639 aa27.53■■■□□ 2
PFDN6-207ENST00000491382 RIMBP3BA6NNM3 1639 aa27.53■■■□□ 2
PFDN6-207ENST00000491382 RIMBP3Q9UFD9 1639 aa27.53■■■□□ 2
PFDN6-207ENST00000491382 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
PFDN6-207ENST00000491382 ARHGEF11O15085 1522 aa27.5■■□□□ 1.99
PFDN6-207ENST00000491382 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
PFDN6-207ENST00000491382 GRIN2AQ12879 1464 aa27.49■■□□□ 1.99
PFDN6-207ENST00000491382 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
PFDN6-207ENST00000491382 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
PFDN6-207ENST00000491382 CUL7Q14999 1698 aa27.37■■□□□ 1.97
PFDN6-207ENST00000491382 NUP160Q12769 1436 aa27.35■■□□□ 1.97
PFDN6-207ENST00000491382 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
PFDN6-207ENST00000491382 IGF1RP08069 1367 aa27.32■■□□□ 1.96
PFDN6-207ENST00000491382 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
PFDN6-207ENST00000491382 CYB5RLQ6IPT4 315 aa27.21■■□□□ 1.95
PFDN6-207ENST00000491382 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
PFDN6-207ENST00000491382 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
PFDN6-207ENST00000491382 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
PFDN6-207ENST00000491382 KIAA0586Q9BVV6 1533 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms