RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.321e-20■■■■■ 215.3
PFDN6-207ENST00000491382 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.48■□□□□ 0.392e-7■■■■■ 43.8
PFDN6-207ENST00000491382 EFTUD2Q15029 972 aaKnown RBP eCLIP15.28■□□□□ 0.042e-7■■■■■ 32.6
PFDN6-207ENST00000491382 SF3A3Q12874 501 aaKnown RBP eCLIP14.32□□□□□ -0.122e-12■■■■■ 31.3
PFDN6-207ENST00000491382 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■■■ 30
PFDN6-207ENST00000491382 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.234e-9■■■■□ 21.5
PFDN6-207ENST00000491382 GTF2F1P35269 517 aaKnown RBP eCLIP17.56■□□□□ 0.47e-12■■■■□ 21.5
PFDN6-207ENST00000491382 PUM1Q14671 1186 aaKnown RBP eCLIP16.4■□□□□ 0.221e-7■■■■□ 20.2
PFDN6-207ENST00000491382 PCBP2Q15366 365 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■■■■□ 19.9
PFDN6-207ENST00000491382 RPS3P23396 243 aaKnown RBP eCLIP15.61■□□□□ 0.096e-7■■■□□ 19.1
PFDN6-207ENST00000491382 SF3B4Q15427 424 aaKnown RBP eCLIP14.6□□□□□ -0.071e-14■■■□□ 18.9
PFDN6-207ENST00000491382 HLTFQ14527 1009 aaKnown RBP eCLIP15.86■□□□□ 0.134e-6■■■□□ 18.1
PFDN6-207ENST00000491382 PABPC4Q13310 644 aaKnown RBP eCLIP19.21■□□□□ 0.674e-9■■■□□ 17.3
PFDN6-207ENST00000491382 ZC3H11AO75152 810 aaKnown RBP eCLIP17.66■□□□□ 0.422e-7■■■□□ 16.9
PFDN6-207ENST00000491382 LARP4Q71RC2 724 aaKnown RBP eCLIP14.68□□□□□ -0.064e-10■■■□□ 16.3
PFDN6-207ENST00000491382 QKIQ96PU8 341 aaKnown RBP eCLIP16.03■□□□□ 0.163e-8■■■□□ 15.8
PFDN6-207ENST00000491382 PRPF4O43172 522 aaKnown RBP eCLIP15.29■□□□□ 0.047e-8■■■□□ 14.7
PFDN6-207ENST00000491382 DDX6P26196 483 aaKnown RBP eCLIP17.06■□□□□ 0.322e-8■■■□□ 14.6
PFDN6-207ENST00000491382 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.51■□□□□ 0.718e-9■■□□□ 14.5
PFDN6-207ENST00000491382 PPIGQ13427 754 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■□□□ 13.2
PFDN6-207ENST00000491382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.69■■□□□ 1.064e-8■■□□□ 13.1
PFDN6-207ENST00000491382 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.472e-8■■□□□ 12.2
PFDN6-207ENST00000491382 EIF3GO75821 320 aaKnown RBP eCLIP11.41□□□□□ -0.584e-7■■□□□ 11.7
PFDN6-207ENST00000491382 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.52■□□□□ 0.242e-8■■□□□ 11.6
PFDN6-207ENST00000491382 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■□□□□ 10.8
PFDN6-207ENST00000491382 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.43■□□□□ 0.71e-6■□□□□ 10.6
PFDN6-207ENST00000491382 ZNF622Q969S3 477 aaKnown RBP eCLIP20.67■□□□□ 0.93e-9■□□□□ 10.4
PFDN6-207ENST00000491382 TROVE2P10155 538 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■□□□□ 10.1
PFDN6-207ENST00000491382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.76■■□□□ 1.715e-21■□□□□ 10
PFDN6-207ENST00000491382 NCBP2P52298 156 aaKnown RBP eCLIP14.76□□□□□ -0.052e-6■□□□□ 9.7
PFDN6-207ENST00000491382 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■□□□□ 9.6
PFDN6-207ENST00000491382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.42■■□□□ 1.52e-9■□□□□ 9.3
PFDN6-207ENST00000491382 FUSP35637 526 aaKnown RBP eCLIP10.64□□□□□ -0.713e-7■□□□□ 8.8
PFDN6-207ENST00000491382 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.81□□□□□ -0.048e-12■□□□□ 8.5
Retrieved 34 of 34 RNA–protein pairs in 8.7 ms