RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
RBM39-236ENST00000490484 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
RBM39-236ENST00000490484 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
RBM39-236ENST00000490484 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
RBM39-236ENST00000490484 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
RBM39-236ENST00000490484 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
RBM39-236ENST00000490484 ABCC5O15440 1437 aa16.18■□□□□ 0.18
RBM39-236ENST00000490484 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
RBM39-236ENST00000490484 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
RBM39-236ENST00000490484 PZPP20742 1482 aa16.16■□□□□ 0.18
RBM39-236ENST00000490484 DUOX2Q9NRD8 1548 aa16.16■□□□□ 0.18
RBM39-236ENST00000490484 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
RBM39-236ENST00000490484 DAPK1P53355 1430 aa16.16■□□□□ 0.18
RBM39-236ENST00000490484 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
RBM39-236ENST00000490484 MROH1Q8NDA8 1641 aa16.16■□□□□ 0.18
RBM39-236ENST00000490484 ABCC3O15438 1527 aa16.14■□□□□ 0.18
RBM39-236ENST00000490484 KIF15Q9NS87 1388 aa16.14■□□□□ 0.17
RBM39-236ENST00000490484 FBXO41Q8TF61 875 aa16.13■□□□□ 0.17
RBM39-236ENST00000490484 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
RBM39-236ENST00000490484 PTPRTO14522 1441 aa16.12■□□□□ 0.17
RBM39-236ENST00000490484 TNRQ92752 1358 aa16.12■□□□□ 0.17
RBM39-236ENST00000490484 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
RBM39-236ENST00000490484 CEP152O94986 1710 aa16.11■□□□□ 0.17
RBM39-236ENST00000490484 A2ML1A8K2U0 1454 aa16.11■□□□□ 0.17
RBM39-236ENST00000490484 PLA2R1Q13018 1463 aa16.11■□□□□ 0.17
RBM39-236ENST00000490484 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
RBM39-236ENST00000490484 PRDM15P57071 1507 aaPredicted RBP16.1■□□□□ 0.17
RBM39-236ENST00000490484 RRP7BPQ9NSQ0 103 aa16.09■□□□□ 0.17
RBM39-236ENST00000490484 CERKQ8TCT0 537 aa16.08■□□□□ 0.16
RBM39-236ENST00000490484 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
RBM39-236ENST00000490484 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
RBM39-236ENST00000490484 DEPDC5O75140 1603 aa16.07■□□□□ 0.16
RBM39-236ENST00000490484 SPATA31D1Q6ZQQ2 1576 aa16.06■□□□□ 0.16
RBM39-236ENST00000490484 ANKRD30AQ9BXX3 1397 aa16.06■□□□□ 0.16
RBM39-236ENST00000490484 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
RBM39-236ENST00000490484 ERVK-7P63135 1459 aa16.05■□□□□ 0.16
RBM39-236ENST00000490484 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
RBM39-236ENST00000490484 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
RBM39-236ENST00000490484 ADGRL2O95490 1459 aa16.04■□□□□ 0.16
RBM39-236ENST00000490484 LTBP4Q8N2S1 1624 aa16.03■□□□□ 0.16
RBM39-236ENST00000490484 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
RBM39-236ENST00000490484 PKD2Q13563 968 aa16.02■□□□□ 0.16
RBM39-236ENST00000490484 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
RBM39-236ENST00000490484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.156e-17■■□□□ 11.8
RBM39-236ENST00000490484 KANK1Q14678 1352 aa15.99■□□□□ 0.15
RBM39-236ENST00000490484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.99■□□□□ 0.15
RBM39-236ENST00000490484 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
RBM39-236ENST00000490484 ARHGAP31Q2M1Z3 1444 aa15.98■□□□□ 0.15
RBM39-236ENST00000490484 PPARGC1BQ86YN6 1023 aaKnown RBP15.98■□□□□ 0.15
RBM39-236ENST00000490484 VWDEQ8N2E2 1590 aa15.98■□□□□ 0.15
RBM39-236ENST00000490484 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
RBM39-236ENST00000490484 ANKRD50Q9ULJ7 1429 aa15.96■□□□□ 0.15
RBM39-236ENST00000490484 LMTK2Q8IWU2 1503 aa15.96■□□□□ 0.15
RBM39-236ENST00000490484 UBR1Q8IWV7 1749 aa15.96■□□□□ 0.15
RBM39-236ENST00000490484 EFCAB6Q5THR3 1501 aa15.95■□□□□ 0.14
RBM39-236ENST00000490484 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
RBM39-236ENST00000490484 IQGAP1P46940 1657 aa15.93■□□□□ 0.14
RBM39-236ENST00000490484 IQSEC2Q5JU85 1478 aa15.93■□□□□ 0.14
RBM39-236ENST00000490484 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
RBM39-236ENST00000490484 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
RBM39-236ENST00000490484 NPHP4O75161 1426 aaPredicted RBP15.92■□□□□ 0.14
RBM39-236ENST00000490484 UNC13BO14795 1591 aa15.92■□□□□ 0.14
RBM39-236ENST00000490484 SYNMO15061 1565 aa15.91■□□□□ 0.14
RBM39-236ENST00000490484 MED14O60244 1454 aa15.91■□□□□ 0.14
RBM39-236ENST00000490484 ROCK1Q13464 1354 aa15.9■□□□□ 0.14
RBM39-236ENST00000490484 ITGAEP38570 1179 aa15.89■□□□□ 0.13
RBM39-236ENST00000490484 SCAF11Q99590 1463 aaKnown RBP15.89■□□□□ 0.13
RBM39-236ENST00000490484 TET3O43151 1660 aa15.89■□□□□ 0.13
RBM39-236ENST00000490484 SLIT1O75093 1534 aa15.88■□□□□ 0.13
RBM39-236ENST00000490484 CPS1P31327 1500 aa15.87■□□□□ 0.13
RBM39-236ENST00000490484 NOS1P29475 1434 aa15.86■□□□□ 0.13
RBM39-236ENST00000490484 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
RBM39-236ENST00000490484 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
RBM39-236ENST00000490484 ARHGAP23Q9P227 1491 aa15.86■□□□□ 0.13
RBM39-236ENST00000490484 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
RBM39-236ENST00000490484 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
RBM39-236ENST00000490484 IQGAP3Q86VI3 1631 aa15.84■□□□□ 0.13
RBM39-236ENST00000490484 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
RBM39-236ENST00000490484 RRBP1Q9P2E9 1410 aaKnown RBP15.84■□□□□ 0.13
RBM39-236ENST00000490484 TMEM2Q9UHN6 1383 aa15.83■□□□□ 0.12
RBM39-236ENST00000490484 E9PCH4 1651 aa15.83■□□□□ 0.12
RBM39-236ENST00000490484 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
RBM39-236ENST00000490484 LTKP29376 864 aa15.81■□□□□ 0.12
RBM39-236ENST00000490484 IDI1Q13907 227 aa15.81■□□□□ 0.12
RBM39-236ENST00000490484 TXNDC2Q86VQ3 553 aa15.81■□□□□ 0.12
RBM39-236ENST00000490484 UBAP1LF5GYI3 381 aa15.8■□□□□ 0.12
RBM39-236ENST00000490484 EID1Q9Y6B2 187 aa15.79■□□□□ 0.12
RBM39-236ENST00000490484 NUP155O75694 1391 aa15.77■□□□□ 0.12
RBM39-236ENST00000490484 SLC52A1Q9NWF4 448 aa15.77■□□□□ 0.12
RBM39-236ENST00000490484 MYO5BQ9ULV0 1848 aa15.77■□□□□ 0.11
RBM39-236ENST00000490484 TMEM131LA2VDJ0 1609 aa15.76■□□□□ 0.11
RBM39-236ENST00000490484 LRRC7Q96NW7 1537 aa15.75■□□□□ 0.11
RBM39-236ENST00000490484 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
RBM39-236ENST00000490484 ZFYVE9O95405 1425 aa15.72■□□□□ 0.11
RBM39-236ENST00000490484 NAIPQ13075 1403 aa15.72■□□□□ 0.11
RBM39-236ENST00000490484 ALKQ9UM73 1620 aa15.72■□□□□ 0.11
RBM39-236ENST00000490484 SPHKAPQ2M3C7 1700 aa15.71■□□□□ 0.11
RBM39-236ENST00000490484 PIP4K2BP78356 416 aa15.71■□□□□ 0.11
RBM39-236ENST00000490484 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
RBM39-236ENST00000490484 TOM1O60784 492 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms