RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 TSPY10P0CW01 314 aa24.87■■□□□ 1.57
NUP58-213ENST00000490231 IQSEC2Q5JU85 1478 aa24.87■■□□□ 1.57
NUP58-213ENST00000490231 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
NUP58-213ENST00000490231 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
NUP58-213ENST00000490231 KDM5DQ9BY66 1539 aa24.86■■□□□ 1.57
NUP58-213ENST00000490231 A2ML1A8K2U0 1454 aa24.84■■□□□ 1.57
NUP58-213ENST00000490231 PZPP20742 1482 aa24.82■■□□□ 1.56
NUP58-213ENST00000490231 WASHC2CQ9Y4E1 1318 aa24.82■■□□□ 1.56
NUP58-213ENST00000490231 KANK4Q5T7N3 995 aaPredicted RBP24.81■■□□□ 1.56
NUP58-213ENST00000490231 TNRQ92752 1358 aa24.8■■□□□ 1.56
NUP58-213ENST00000490231 MIA2Q96PC5 1412 aa24.79■■□□□ 1.56
NUP58-213ENST00000490231 FBXO31Q5XUX0 539 aaPredicted RBP24.79■■□□□ 1.56
NUP58-213ENST00000490231 MAST1Q9Y2H9 1570 aa24.79■■□□□ 1.56
NUP58-213ENST00000490231 DNMT1P26358 1616 aaKnown RBP24.79■■□□□ 1.56
NUP58-213ENST00000490231 ZNF335Q9H4Z2 1342 aaPredicted RBP24.77■■□□□ 1.56
NUP58-213ENST00000490231 MYOM3Q5VTT5 1437 aa24.77■■□□□ 1.56
NUP58-213ENST00000490231 RNF17Q9BXT8 1623 aaKnown RBP24.72■■□□□ 1.55
NUP58-213ENST00000490231 NLRP1Q9C000 1473 aa24.7■■□□□ 1.55
NUP58-213ENST00000490231 EIF2AK4Q9P2K8 1649 aaKnown RBP24.69■■□□□ 1.54
NUP58-213ENST00000490231 ABCC3O15438 1527 aa24.67■■□□□ 1.54
NUP58-213ENST00000490231 ZC3H13Q5T200 1668 aaKnown RBP24.67■■□□□ 1.54
NUP58-213ENST00000490231 THEMISQ8N1K5 641 aaPredicted RBP24.67■■□□□ 1.54
NUP58-213ENST00000490231 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
NUP58-213ENST00000490231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.65■■□□□ 1.54
NUP58-213ENST00000490231 POLR1AO95602 1720 aaPredicted RBP24.64■■□□□ 1.54
NUP58-213ENST00000490231 UGGT1Q9NYU2 1555 aa24.64■■□□□ 1.54
NUP58-213ENST00000490231 APLP2Q06481 763 aa24.64■■□□□ 1.54
NUP58-213ENST00000490231 ANKLE2Q86XL3 938 aa24.64■■□□□ 1.54
NUP58-213ENST00000490231 DUOX2Q9NRD8 1548 aa24.64■■□□□ 1.53
NUP58-213ENST00000490231 SPATA31D1Q6ZQQ2 1576 aa24.63■■□□□ 1.53
NUP58-213ENST00000490231 MROH1Q8NDA8 1641 aa24.62■■□□□ 1.53
NUP58-213ENST00000490231 SHANK2Q9UPX8 1470 aa24.62■■□□□ 1.53
NUP58-213ENST00000490231 UBAP1LF5GYI3 381 aa24.61■■□□□ 1.53
NUP58-213ENST00000490231 DISP3Q9P2K9 1392 aa24.61■■□□□ 1.53
NUP58-213ENST00000490231 ABCC5O15440 1437 aa24.6■■□□□ 1.53
NUP58-213ENST00000490231 MED14O60244 1454 aa24.59■■□□□ 1.53
NUP58-213ENST00000490231 ERVK-7P63135 1459 aa24.59■■□□□ 1.53
NUP58-213ENST00000490231 KIF15Q9NS87 1388 aa24.58■■□□□ 1.53
NUP58-213ENST00000490231 CPS1P31327 1500 aa24.58■■□□□ 1.53
NUP58-213ENST00000490231 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
NUP58-213ENST00000490231 ERBINQ96RT1 1412 aa24.57■■□□□ 1.52
NUP58-213ENST00000490231 PTPN23Q9H3S7 1636 aa24.57■■□□□ 1.52
NUP58-213ENST00000490231 NPHP4O75161 1426 aaPredicted RBP24.56■■□□□ 1.52
NUP58-213ENST00000490231 CROCC2H7BZ55 1655 aa24.55■■□□□ 1.52
NUP58-213ENST00000490231 DAPK1P53355 1430 aa24.54■■□□□ 1.52
NUP58-213ENST00000490231 FGD6Q6ZV73 1430 aa24.54■■□□□ 1.52
NUP58-213ENST00000490231 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
NUP58-213ENST00000490231 RRP7BPQ9NSQ0 103 aa24.53■■□□□ 1.52
NUP58-213ENST00000490231 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
NUP58-213ENST00000490231 VWDEQ8N2E2 1590 aa24.52■■□□□ 1.52
NUP58-213ENST00000490231 CEP152O94986 1710 aa24.51■■□□□ 1.51
NUP58-213ENST00000490231 IQGAP1P46940 1657 aa24.47■■□□□ 1.51
NUP58-213ENST00000490231 ILDR2Q71H61 639 aa24.47■■□□□ 1.51
NUP58-213ENST00000490231 ANKRD30AQ9BXX3 1397 aa24.46■■□□□ 1.51
NUP58-213ENST00000490231 TOM1O60784 492 aa24.46■■□□□ 1.51
NUP58-213ENST00000490231 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
NUP58-213ENST00000490231 KANK1Q14678 1352 aa24.44■■□□□ 1.5
NUP58-213ENST00000490231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.52e-6■■□□□ 13.1
NUP58-213ENST00000490231 SCAF11Q99590 1463 aaKnown RBP24.41■■□□□ 1.5
NUP58-213ENST00000490231 ARHGAP23Q9P227 1491 aa24.41■■□□□ 1.5
NUP58-213ENST00000490231 CHIC2Q9UKJ5 165 aa24.41■■□□□ 1.5
NUP58-213ENST00000490231 SLIT1O75093 1534 aa24.4■■□□□ 1.5
NUP58-213ENST00000490231 LMTK2Q8IWU2 1503 aa24.4■■□□□ 1.5
NUP58-213ENST00000490231 PIP4K2BP78356 416 aa24.39■■□□□ 1.49
NUP58-213ENST00000490231 SCAF1Q9H7N4 1312 aaKnown RBP24.38■■□□□ 1.49
NUP58-213ENST00000490231 ADGRL2O95490 1459 aa24.38■■□□□ 1.49
NUP58-213ENST00000490231 LTKP29376 864 aa24.37■■□□□ 1.49
NUP58-213ENST00000490231 SOCS7O14512 581 aa24.36■■□□□ 1.49
NUP58-213ENST00000490231 TXNDC2Q86VQ3 553 aa24.36■■□□□ 1.49
NUP58-213ENST00000490231 LRRC7Q96NW7 1537 aa24.35■■□□□ 1.49
NUP58-213ENST00000490231 HSPA1LP34931 641 aa24.35■■□□□ 1.49
NUP58-213ENST00000490231 SYNMO15061 1565 aa24.34■■□□□ 1.49
NUP58-213ENST00000490231 EID1Q9Y6B2 187 aa24.34■■□□□ 1.49
NUP58-213ENST00000490231 CFAP65Q6ZU64 1925 aaKnown RBP24.33■■□□□ 1.49
NUP58-213ENST00000490231 PIK3C2BO00750 1634 aa24.33■■□□□ 1.49
NUP58-213ENST00000490231 ALKQ9UM73 1620 aa24.32■■□□□ 1.48
NUP58-213ENST00000490231 TMEM2Q9UHN6 1383 aa24.32■■□□□ 1.48
NUP58-213ENST00000490231 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
NUP58-213ENST00000490231 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
NUP58-213ENST00000490231 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
NUP58-213ENST00000490231 KDM5AP29375 1690 aaKnown RBP24.3■■□□□ 1.48
NUP58-213ENST00000490231 IDI1Q13907 227 aa24.3■■□□□ 1.48
NUP58-213ENST00000490231 EFCAB6Q5THR3 1501 aa24.3■■□□□ 1.48
NUP58-213ENST00000490231 NOS1P29475 1434 aa24.29■■□□□ 1.48
NUP58-213ENST00000490231 ANKRD50Q9ULJ7 1429 aa24.27■■□□□ 1.48
NUP58-213ENST00000490231 SLC52A1Q9NWF4 448 aa24.24■■□□□ 1.47
NUP58-213ENST00000490231 RPRD2Q5VT52 1461 aaKnown RBP24.24■■□□□ 1.47
NUP58-213ENST00000490231 ADGRB3O60242 1522 aa24.21■■□□□ 1.47
NUP58-213ENST00000490231 MED1Q15648 1581 aaPredicted RBP24.2■■□□□ 1.47
NUP58-213ENST00000490231 TET3O43151 1660 aa24.18■■□□□ 1.46
NUP58-213ENST00000490231 KCNA6P17658 529 aa24.16■■□□□ 1.46
NUP58-213ENST00000490231 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
NUP58-213ENST00000490231 UNC13BO14795 1591 aa24.13■■□□□ 1.45
NUP58-213ENST00000490231 SLC26A8Q96RN1 970 aa24.13■■□□□ 1.45
NUP58-213ENST00000490231 XIRP1Q702N8 1843 aaKnown RBP24.12■■□□□ 1.45
NUP58-213ENST00000490231 TMEM94Q12767 1356 aa24.11■■□□□ 1.45
NUP58-213ENST00000490231 ZFYVE9O95405 1425 aa24.1■■□□□ 1.45
NUP58-213ENST00000490231 GCC2Q8IWJ2 1684 aa24.09■■□□□ 1.45
NUP58-213ENST00000490231 HDGFP51858 240 aaKnown RBP24.08■■□□□ 1.45
NUP58-213ENST00000490231 FAM135BQ49AJ0 1406 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms