RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ILDR1Q86SU0 546 aaPredicted RBP18.92■□□□□ 0.62
SRSF4-204ENST00000489898 NCOA1Q15788 1441 aa18.91■□□□□ 0.62
SRSF4-204ENST00000489898 ABCC3O15438 1527 aa18.91■□□□□ 0.62
SRSF4-204ENST00000489898 NEURL4Q96JN8 1562 aa18.9■□□□□ 0.62
SRSF4-204ENST00000489898 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
SRSF4-204ENST00000489898 PZPP20742 1482 aa18.9■□□□□ 0.62
SRSF4-204ENST00000489898 ZMYM3Q14202 1370 aa18.89■□□□□ 0.61
SRSF4-204ENST00000489898 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
SRSF4-204ENST00000489898 LTBP4Q8N2S1 1624 aa18.89■□□□□ 0.61
SRSF4-204ENST00000489898 ABCC5O15440 1437 aa18.88■□□□□ 0.61
SRSF4-204ENST00000489898 SPATA31D1Q6ZQQ2 1576 aa18.87■□□□□ 0.61
SRSF4-204ENST00000489898 DUOX2Q9NRD8 1548 aa18.86■□□□□ 0.61
SRSF4-204ENST00000489898 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
SRSF4-204ENST00000489898 VWDEQ8N2E2 1590 aa18.85■□□□□ 0.61
SRSF4-204ENST00000489898 PLA2R1Q13018 1463 aa18.85■□□□□ 0.61
SRSF4-204ENST00000489898 DAPK1P53355 1430 aa18.84■□□□□ 0.61
SRSF4-204ENST00000489898 UBR1Q8IWV7 1749 aa18.82■□□□□ 0.6
SRSF4-204ENST00000489898 PTPRTO14522 1441 aa18.82■□□□□ 0.6
SRSF4-204ENST00000489898 A2ML1A8K2U0 1454 aa18.81■□□□□ 0.6
SRSF4-204ENST00000489898 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
SRSF4-204ENST00000489898 CFAP65Q6ZU64 1925 aaKnown RBP18.79■□□□□ 0.6
SRSF4-204ENST00000489898 ERBINQ96RT1 1412 aa18.78■□□□□ 0.6
SRSF4-204ENST00000489898 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
SRSF4-204ENST00000489898 ERVK-7P63135 1459 aa18.77■□□□□ 0.59
SRSF4-204ENST00000489898 GGT6Q6P531 493 aa18.75■□□□□ 0.59
SRSF4-204ENST00000489898 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
SRSF4-204ENST00000489898 STRCP1A6NGW2 1772 aa18.75■□□□□ 0.59
SRSF4-204ENST00000489898 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
SRSF4-204ENST00000489898 UNC13BO14795 1591 aa18.74■□□□□ 0.59
SRSF4-204ENST00000489898 SYNMO15061 1565 aa18.73■□□□□ 0.59
SRSF4-204ENST00000489898 KIF15Q9NS87 1388 aa18.73■□□□□ 0.59
SRSF4-204ENST00000489898 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
SRSF4-204ENST00000489898 KIF3BO15066 747 aa18.72■□□□□ 0.59
SRSF4-204ENST00000489898 EFCAB6Q5THR3 1501 aa18.72■□□□□ 0.59
SRSF4-204ENST00000489898 NLRP1Q9C000 1473 aa18.71■□□□□ 0.59
SRSF4-204ENST00000489898 PIK3C2BO00750 1634 aa18.71■□□□□ 0.58
SRSF4-204ENST00000489898 TNRQ92752 1358 aa18.7■□□□□ 0.58
SRSF4-204ENST00000489898 IQGAP1P46940 1657 aa18.7■□□□□ 0.58
SRSF4-204ENST00000489898 GCC2Q8IWJ2 1684 aa18.69■□□□□ 0.58
SRSF4-204ENST00000489898 FBXO41Q8TF61 875 aa18.69■□□□□ 0.58
SRSF4-204ENST00000489898 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
SRSF4-204ENST00000489898 UGGT1Q9NYU2 1555 aa18.68■□□□□ 0.58
SRSF4-204ENST00000489898 ARHGAP31Q2M1Z3 1444 aa18.68■□□□□ 0.58
SRSF4-204ENST00000489898 FBXO31Q5XUX0 539 aaPredicted RBP18.68■□□□□ 0.58
SRSF4-204ENST00000489898 TET3O43151 1660 aa18.67■□□□□ 0.58
SRSF4-204ENST00000489898 IQSEC2Q5JU85 1478 aa18.67■□□□□ 0.58
SRSF4-204ENST00000489898 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
SRSF4-204ENST00000489898 MED14O60244 1454 aa18.65■□□□□ 0.58
SRSF4-204ENST00000489898 ALKQ9UM73 1620 aa18.65■□□□□ 0.58
SRSF4-204ENST00000489898 XIRP1Q702N8 1843 aaKnown RBP18.65■□□□□ 0.58
SRSF4-204ENST00000489898 TSPY4P0CV99 314 aa18.64■□□□□ 0.57
SRSF4-204ENST00000489898 TSPY10P0CW01 314 aa18.64■□□□□ 0.57
SRSF4-204ENST00000489898 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
SRSF4-204ENST00000489898 E9PCH4 1651 aa18.63■□□□□ 0.57
SRSF4-204ENST00000489898 ARHGAP23Q9P227 1491 aa18.63■□□□□ 0.57
SRSF4-204ENST00000489898 CERKQ8TCT0 537 aa18.62■□□□□ 0.57
SRSF4-204ENST00000489898 SLIT1O75093 1534 aa18.62■□□□□ 0.57
SRSF4-204ENST00000489898 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
SRSF4-204ENST00000489898 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
SRSF4-204ENST00000489898 NOS1P29475 1434 aa18.57■□□□□ 0.56
SRSF4-204ENST00000489898 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
SRSF4-204ENST00000489898 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
SRSF4-204ENST00000489898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
SRSF4-204ENST00000489898 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
SRSF4-204ENST00000489898 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
SRSF4-204ENST00000489898 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
SRSF4-204ENST00000489898 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
SRSF4-204ENST00000489898 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.56
SRSF4-204ENST00000489898 PKD2Q13563 968 aa18.52■□□□□ 0.56
SRSF4-204ENST00000489898 RRBP1Q9P2E9 1410 aaKnown RBP18.51■□□□□ 0.55
SRSF4-204ENST00000489898 CPS1P31327 1500 aa18.51■□□□□ 0.55
SRSF4-204ENST00000489898 APLP2Q06481 763 aa18.51■□□□□ 0.55
SRSF4-204ENST00000489898 ROCK1Q13464 1354 aa18.51■□□□□ 0.55
SRSF4-204ENST00000489898 RPRD2Q5VT52 1461 aaKnown RBP18.51■□□□□ 0.55
SRSF4-204ENST00000489898 NPHP4O75161 1426 aaPredicted RBP18.5■□□□□ 0.55
SRSF4-204ENST00000489898 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
SRSF4-204ENST00000489898 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
SRSF4-204ENST00000489898 SCAF11Q99590 1463 aaKnown RBP18.49■□□□□ 0.55
SRSF4-204ENST00000489898 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
SRSF4-204ENST00000489898 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
SRSF4-204ENST00000489898 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
SRSF4-204ENST00000489898 NRXN3Q9Y4C0 1643 aa18.41■□□□□ 0.54
SRSF4-204ENST00000489898 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
SRSF4-204ENST00000489898 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
SRSF4-204ENST00000489898 KANK1Q14678 1352 aa18.4■□□□□ 0.54
SRSF4-204ENST00000489898 TMEM2Q9UHN6 1383 aa18.4■□□□□ 0.54
SRSF4-204ENST00000489898 LTKP29376 864 aa18.38■□□□□ 0.53
SRSF4-204ENST00000489898 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
SRSF4-204ENST00000489898 THEMISQ8N1K5 641 aaPredicted RBP18.37■□□□□ 0.53
SRSF4-204ENST00000489898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.537e-10■□□□□ 9
SRSF4-204ENST00000489898 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
SRSF4-204ENST00000489898 NAIPQ13075 1403 aa18.35■□□□□ 0.53
SRSF4-204ENST00000489898 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
SRSF4-204ENST00000489898 PPARGC1BQ86YN6 1023 aaKnown RBP18.34■□□□□ 0.53
SRSF4-204ENST00000489898 IDI1Q13907 227 aa18.33■□□□□ 0.52
SRSF4-204ENST00000489898 TRPM2O94759 1503 aa18.33■□□□□ 0.52
SRSF4-204ENST00000489898 XRN1Q8IZH2 1706 aaKnown RBP18.3■□□□□ 0.52
SRSF4-204ENST00000489898 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
SRSF4-204ENST00000489898 KIF1BO60333 1816 aa18.28■□□□□ 0.52
SRSF4-204ENST00000489898 HFM1A2PYH4 1435 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms