RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 A2ML1A8K2U0 1454 aa14.9□□□□□ -0.02
SNX17-207ENST00000489402 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
SNX17-207ENST00000489402 FBXO31Q5XUX0 539 aaPredicted RBP14.9□□□□□ -0.02
SNX17-207ENST00000489402 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
SNX17-207ENST00000489402 DISP3Q9P2K9 1392 aa14.89□□□□□ -0.03
SNX17-207ENST00000489402 KANK4Q5T7N3 995 aaPredicted RBP14.89□□□□□ -0.03
SNX17-207ENST00000489402 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
SNX17-207ENST00000489402 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
SNX17-207ENST00000489402 TNRQ92752 1358 aa14.87□□□□□ -0.03
SNX17-207ENST00000489402 VPS8Q8N3P4 1428 aa14.87□□□□□ -0.03
SNX17-207ENST00000489402 TSPY4P0CV99 314 aa14.87□□□□□ -0.03
SNX17-207ENST00000489402 TSPY10P0CW01 314 aa14.87□□□□□ -0.03
SNX17-207ENST00000489402 PZPP20742 1482 aa14.87□□□□□ -0.03
SNX17-207ENST00000489402 POLR1AO95602 1720 aaPredicted RBP14.86□□□□□ -0.03
SNX17-207ENST00000489402 LRRC9Q6ZRR7 1453 aa14.86□□□□□ -0.03
SNX17-207ENST00000489402 WASHC2CQ9Y4E1 1318 aa14.86□□□□□ -0.03
SNX17-207ENST00000489402 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
SNX17-207ENST00000489402 SPATA31D1Q6ZQQ2 1576 aa14.84□□□□□ -0.03
SNX17-207ENST00000489402 MAST1Q9Y2H9 1570 aa14.82□□□□□ -0.04
SNX17-207ENST00000489402 ZC3H13Q5T200 1668 aaKnown RBP14.82□□□□□ -0.04
SNX17-207ENST00000489402 UBAP1LF5GYI3 381 aa14.82□□□□□ -0.04
SNX17-207ENST00000489402 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
SNX17-207ENST00000489402 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
SNX17-207ENST00000489402 RNF17Q9BXT8 1623 aaKnown RBP14.81□□□□□ -0.04
SNX17-207ENST00000489402 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
SNX17-207ENST00000489402 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
SNX17-207ENST00000489402 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
SNX17-207ENST00000489402 MYOM3Q5VTT5 1437 aa14.79□□□□□ -0.04
SNX17-207ENST00000489402 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
SNX17-207ENST00000489402 UGGT1Q9NYU2 1555 aa14.79□□□□□ -0.04
SNX17-207ENST00000489402 CPS1P31327 1500 aa14.78□□□□□ -0.04
SNX17-207ENST00000489402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX17-207ENST00000489402 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
SNX17-207ENST00000489402 ABCC3O15438 1527 aa14.77□□□□□ -0.04
SNX17-207ENST00000489402 DEPDC5O75140 1603 aa14.76□□□□□ -0.05
SNX17-207ENST00000489402 SHANK2Q9UPX8 1470 aa14.76□□□□□ -0.05
SNX17-207ENST00000489402 MROH1Q8NDA8 1641 aa14.75□□□□□ -0.05
SNX17-207ENST00000489402 SOCS7O14512 581 aa14.75□□□□□ -0.05
SNX17-207ENST00000489402 FOXD1Q16676 465 aa14.75□□□□□ -0.05
SNX17-207ENST00000489402 DUOX2Q9NRD8 1548 aa14.75□□□□□ -0.05
SNX17-207ENST00000489402 CEP152O94986 1710 aa14.75□□□□□ -0.05
SNX17-207ENST00000489402 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
SNX17-207ENST00000489402 APLP2Q06481 763 aa14.73□□□□□ -0.05
SNX17-207ENST00000489402 MED14O60244 1454 aa14.73□□□□□ -0.05
SNX17-207ENST00000489402 ERVK-7P63135 1459 aa14.73□□□□□ -0.05
SNX17-207ENST00000489402 IQGAP1P46940 1657 aa14.73□□□□□ -0.05
SNX17-207ENST00000489402 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
SNX17-207ENST00000489402 CROCC2H7BZ55 1655 aa14.72□□□□□ -0.05
SNX17-207ENST00000489402 TOM1O60784 492 aa14.72□□□□□ -0.05
SNX17-207ENST00000489402 CFAP65Q6ZU64 1925 aaKnown RBP14.72□□□□□ -0.05
SNX17-207ENST00000489402 VWDEQ8N2E2 1590 aa14.72□□□□□ -0.05
SNX17-207ENST00000489402 PTPN23Q9H3S7 1636 aa14.7□□□□□ -0.06
SNX17-207ENST00000489402 PIP4K2BP78356 416 aa14.7□□□□□ -0.06
SNX17-207ENST00000489402 KIF15Q9NS87 1388 aa14.7□□□□□ -0.06
SNX17-207ENST00000489402 STRCP1A6NGW2 1772 aa14.7□□□□□ -0.06
SNX17-207ENST00000489402 ERBINQ96RT1 1412 aa14.69□□□□□ -0.06
SNX17-207ENST00000489402 PRDM15P57071 1507 aaPredicted RBP14.69□□□□□ -0.06
SNX17-207ENST00000489402 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
SNX17-207ENST00000489402 ABCC5O15440 1437 aa14.68□□□□□ -0.06
SNX17-207ENST00000489402 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
SNX17-207ENST00000489402 RRP7BPQ9NSQ0 103 aa14.67□□□□□ -0.06
SNX17-207ENST00000489402 SYNMO15061 1565 aa14.66□□□□□ -0.06
SNX17-207ENST00000489402 DAPK1P53355 1430 aa14.66□□□□□ -0.06
SNX17-207ENST00000489402 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
SNX17-207ENST00000489402 SCAF11Q99590 1463 aaKnown RBP14.65□□□□□ -0.06
SNX17-207ENST00000489402 KANK1Q14678 1352 aa14.65□□□□□ -0.06
SNX17-207ENST00000489402 HSPA1LP34931 641 aa14.65□□□□□ -0.06
SNX17-207ENST00000489402 FGD6Q6ZV73 1430 aa14.64□□□□□ -0.07
SNX17-207ENST00000489402 LTKP29376 864 aa14.63□□□□□ -0.07
SNX17-207ENST00000489402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.07
SNX17-207ENST00000489402 CHIC2Q9UKJ5 165 aa14.63□□□□□ -0.07
SNX17-207ENST00000489402 SLIT1O75093 1534 aa14.62□□□□□ -0.07
SNX17-207ENST00000489402 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
SNX17-207ENST00000489402 ANKRD30AQ9BXX3 1397 aa14.61□□□□□ -0.07
SNX17-207ENST00000489402 MED1Q15648 1581 aaPredicted RBP14.61□□□□□ -0.07
SNX17-207ENST00000489402 EID1Q9Y6B2 187 aa14.61□□□□□ -0.07
SNX17-207ENST00000489402 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
SNX17-207ENST00000489402 ARHGAP23Q9P227 1491 aa14.61□□□□□ -0.07
SNX17-207ENST00000489402 TXNDC2Q86VQ3 553 aa14.6□□□□□ -0.07
SNX17-207ENST00000489402 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
SNX17-207ENST00000489402 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.07
SNX17-207ENST00000489402 LMTK2Q8IWU2 1503 aa14.58□□□□□ -0.08
SNX17-207ENST00000489402 EFCAB6Q5THR3 1501 aa14.56□□□□□ -0.08
SNX17-207ENST00000489402 TMEM2Q9UHN6 1383 aa14.56□□□□□ -0.08
SNX17-207ENST00000489402 XIRP1Q702N8 1843 aaKnown RBP14.55□□□□□ -0.08
SNX17-207ENST00000489402 ADGRL2O95490 1459 aa14.54□□□□□ -0.08
SNX17-207ENST00000489402 IDI1Q13907 227 aa14.53□□□□□ -0.08
SNX17-207ENST00000489402 FAM50AQ14320 339 aaKnown RBP14.53□□□□□ -0.08
SNX17-207ENST00000489402 RBM33Q96EV2 1170 aaKnown RBP14.52□□□□□ -0.09
SNX17-207ENST00000489402 ADGRB3O60242 1522 aa14.51□□□□□ -0.09
SNX17-207ENST00000489402 NOS1P29475 1434 aa14.51□□□□□ -0.09
SNX17-207ENST00000489402 RPRD2Q5VT52 1461 aaKnown RBP14.5□□□□□ -0.09
SNX17-207ENST00000489402 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
SNX17-207ENST00000489402 SLC52A1Q9NWF4 448 aa14.49□□□□□ -0.09
SNX17-207ENST00000489402 TET3O43151 1660 aa14.49□□□□□ -0.09
SNX17-207ENST00000489402 KCNA6P17658 529 aa14.47□□□□□ -0.09
SNX17-207ENST00000489402 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
SNX17-207ENST00000489402 BCANQ96GW7 911 aa14.47□□□□□ -0.09
SNX17-207ENST00000489402 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
SNX17-207ENST00000489402 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms