RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
PLS3-207ENST00000489283 KIF3BO15066 747 aa22.16■■□□□ 1.14
PLS3-207ENST00000489283 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
PLS3-207ENST00000489283 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
PLS3-207ENST00000489283 CERKQ8TCT0 537 aa22.15■■□□□ 1.14
PLS3-207ENST00000489283 EIF2AK4Q9P2K8 1649 aaKnown RBP22.15■■□□□ 1.14
PLS3-207ENST00000489283 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.14
PLS3-207ENST00000489283 ZC3H13Q5T200 1668 aaKnown RBP22.12■■□□□ 1.13
PLS3-207ENST00000489283 PZPP20742 1482 aa22.11■■□□□ 1.13
PLS3-207ENST00000489283 PLA2R1Q13018 1463 aa22.1■■□□□ 1.13
PLS3-207ENST00000489283 APLP2Q06481 763 aa22.1■■□□□ 1.13
PLS3-207ENST00000489283 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
PLS3-207ENST00000489283 MROH1Q8NDA8 1641 aa22.09■■□□□ 1.13
PLS3-207ENST00000489283 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
PLS3-207ENST00000489283 LTBP4Q8N2S1 1624 aa22.07■■□□□ 1.12
PLS3-207ENST00000489283 CEP152O94986 1710 aa22.07■■□□□ 1.12
PLS3-207ENST00000489283 POLR1AO95602 1720 aaPredicted RBP22.07■■□□□ 1.12
PLS3-207ENST00000489283 SHANK2Q9UPX8 1470 aa22.07■■□□□ 1.12
PLS3-207ENST00000489283 TCOF1Q13428 1488 aaKnown RBP22.06■■□□□ 1.12
PLS3-207ENST00000489283 ABCC3O15438 1527 aa22.06■■□□□ 1.12
PLS3-207ENST00000489283 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
PLS3-207ENST00000489283 WASHC2CQ9Y4E1 1318 aa22.06■■□□□ 1.12
PLS3-207ENST00000489283 TNRQ92752 1358 aa22.04■■□□□ 1.12
PLS3-207ENST00000489283 FGD6Q6ZV73 1430 aa22.04■■□□□ 1.12
PLS3-207ENST00000489283 NCKAP5LQ9HCH0 1330 aa22.04■■□□□ 1.12
PLS3-207ENST00000489283 ABCC5O15440 1437 aa22.03■■□□□ 1.12
PLS3-207ENST00000489283 FBXO31Q5XUX0 539 aaPredicted RBP22.02■■□□□ 1.12
PLS3-207ENST00000489283 DAPK1P53355 1430 aa22.01■■□□□ 1.11
PLS3-207ENST00000489283 PKD2Q13563 968 aa21.99■■□□□ 1.11
PLS3-207ENST00000489283 PRDM15P57071 1507 aaPredicted RBP21.99■■□□□ 1.11
PLS3-207ENST00000489283 SPATA31D1Q6ZQQ2 1576 aa21.99■■□□□ 1.11
PLS3-207ENST00000489283 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
PLS3-207ENST00000489283 NEURL4Q96JN8 1562 aa21.98■■□□□ 1.11
PLS3-207ENST00000489283 NLRP1Q9C000 1473 aa21.97■■□□□ 1.11
PLS3-207ENST00000489283 DEPDC5O75140 1603 aa21.97■■□□□ 1.11
PLS3-207ENST00000489283 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
PLS3-207ENST00000489283 CFAP65Q6ZU64 1925 aaKnown RBP21.96■■□□□ 1.11
PLS3-207ENST00000489283 IQSEC2Q5JU85 1478 aa21.96■■□□□ 1.11
PLS3-207ENST00000489283 ERVK-7P63135 1459 aa21.95■■□□□ 1.1
PLS3-207ENST00000489283 UGGT1Q9NYU2 1555 aa21.95■■□□□ 1.1
PLS3-207ENST00000489283 ZNF335Q9H4Z2 1342 aaPredicted RBP21.92■■□□□ 1.1
PLS3-207ENST00000489283 RRP7BPQ9NSQ0 103 aa21.91■■□□□ 1.1
PLS3-207ENST00000489283 UBR1Q8IWV7 1749 aa21.89■■□□□ 1.09
PLS3-207ENST00000489283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
PLS3-207ENST00000489283 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
PLS3-207ENST00000489283 ADGRL2O95490 1459 aa21.86■■□□□ 1.09
PLS3-207ENST00000489283 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
PLS3-207ENST00000489283 CHIC2Q9UKJ5 165 aa21.85■■□□□ 1.09
PLS3-207ENST00000489283 ARHGAP31Q2M1Z3 1444 aa21.85■■□□□ 1.09
PLS3-207ENST00000489283 VWDEQ8N2E2 1590 aa21.84■■□□□ 1.09
PLS3-207ENST00000489283 THEMISQ8N1K5 641 aaPredicted RBP21.84■■□□□ 1.09
PLS3-207ENST00000489283 MED14O60244 1454 aa21.83■■□□□ 1.08
PLS3-207ENST00000489283 LMTK2Q8IWU2 1503 aa21.81■■□□□ 1.08
PLS3-207ENST00000489283 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
PLS3-207ENST00000489283 ANKLE2Q86XL3 938 aa21.81■■□□□ 1.08
PLS3-207ENST00000489283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
PLS3-207ENST00000489283 KANK1Q14678 1352 aa21.81■■□□□ 1.08
PLS3-207ENST00000489283 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
PLS3-207ENST00000489283 PIK3C2BO00750 1634 aa21.8■■□□□ 1.08
PLS3-207ENST00000489283 CPS1P31327 1500 aa21.8■■□□□ 1.08
PLS3-207ENST00000489283 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
PLS3-207ENST00000489283 SYNMO15061 1565 aa21.75■■□□□ 1.07
PLS3-207ENST00000489283 STRCP1A6NGW2 1772 aa21.75■■□□□ 1.07
PLS3-207ENST00000489283 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
PLS3-207ENST00000489283 SLIT1O75093 1534 aa21.75■■□□□ 1.07
PLS3-207ENST00000489283 SCAF11Q99590 1463 aaKnown RBP21.73■■□□□ 1.07
PLS3-207ENST00000489283 ARHGAP23Q9P227 1491 aa21.73■■□□□ 1.07
PLS3-207ENST00000489283 ANKRD50Q9ULJ7 1429 aa21.72■■□□□ 1.07
PLS3-207ENST00000489283 UNC13BO14795 1591 aa21.72■■□□□ 1.07
PLS3-207ENST00000489283 UBAP1LF5GYI3 381 aa21.71■■□□□ 1.07
PLS3-207ENST00000489283 TET3O43151 1660 aa21.71■■□□□ 1.07
PLS3-207ENST00000489283 GCC2Q8IWJ2 1684 aa21.7■■□□□ 1.06
PLS3-207ENST00000489283 ADGRB3O60242 1522 aa21.67■■□□□ 1.06
PLS3-207ENST00000489283 NOS1P29475 1434 aa21.67■■□□□ 1.06
PLS3-207ENST00000489283 RPRD2Q5VT52 1461 aaKnown RBP21.65■■□□□ 1.06
PLS3-207ENST00000489283 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.06
PLS3-207ENST00000489283 LTKP29376 864 aa21.64■■□□□ 1.05
PLS3-207ENST00000489283 ROCK1Q13464 1354 aa21.63■■□□□ 1.05
PLS3-207ENST00000489283 TMEM2Q9UHN6 1383 aa21.63■■□□□ 1.05
PLS3-207ENST00000489283 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
PLS3-207ENST00000489283 TXNDC2Q86VQ3 553 aa21.62■■□□□ 1.05
PLS3-207ENST00000489283 E9PCH4 1651 aa21.62■■□□□ 1.05
PLS3-207ENST00000489283 ALKQ9UM73 1620 aa21.62■■□□□ 1.05
PLS3-207ENST00000489283 LRRC7Q96NW7 1537 aa21.61■■□□□ 1.05
PLS3-207ENST00000489283 IDI1Q13907 227 aa21.61■■□□□ 1.05
PLS3-207ENST00000489283 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
PLS3-207ENST00000489283 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
PLS3-207ENST00000489283 DISP3Q9P2K9 1392 aa21.6■■□□□ 1.05
PLS3-207ENST00000489283 XIRP1Q702N8 1843 aaKnown RBP21.59■■□□□ 1.05
PLS3-207ENST00000489283 EID1Q9Y6B2 187 aa21.59■■□□□ 1.05
PLS3-207ENST00000489283 TOM1O60784 492 aa21.57■■□□□ 1.04
PLS3-207ENST00000489283 SCAF1Q9H7N4 1312 aaKnown RBP21.56■■□□□ 1.04
PLS3-207ENST00000489283 TMEM131LA2VDJ0 1609 aa21.55■■□□□ 1.04
PLS3-207ENST00000489283 ITGAEP38570 1179 aa21.55■■□□□ 1.04
PLS3-207ENST00000489283 PIP4K2BP78356 416 aa21.55■■□□□ 1.04
PLS3-207ENST00000489283 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
PLS3-207ENST00000489283 NWD1Q149M9 1564 aa21.49■■□□□ 1.03
PLS3-207ENST00000489283 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
PLS3-207ENST00000489283 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
PLS3-207ENST00000489283 HSPA1LP34931 641 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms