RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SETD1BQ9UPS6 1966 aaKnown RBP27.64■■■□□ 2.01
ITGB1-215ENST00000488494 PPP6R1Q9UPN7 881 aa27.63■■■□□ 2.01
ITGB1-215ENST00000488494 MYO3AQ8NEV4 1616 aa27.63■■■□□ 2.01
ITGB1-215ENST00000488494 PTPRKQ15262 1439 aa27.61■■■□□ 2.01
ITGB1-215ENST00000488494 DUOX2Q9NRD8 1548 aa27.6■■■□□ 2.01
ITGB1-215ENST00000488494 KIF15Q9NS87 1388 aa27.58■■■□□ 2.01
ITGB1-215ENST00000488494 ZNF142P52746 1687 aaPredicted RBP27.57■■■□□ 2
ITGB1-215ENST00000488494 MROH1Q8NDA8 1641 aa27.56■■■□□ 2
ITGB1-215ENST00000488494 STRCQ7RTU9 1775 aa27.55■■■□□ 2
ITGB1-215ENST00000488494 ZC3H13Q5T200 1668 aaKnown RBP27.55■■■□□ 2
ITGB1-215ENST00000488494 CEP170BQ9Y4F5 1589 aaPredicted RBP27.53■■■□□ 2
ITGB1-215ENST00000488494 PZPP20742 1482 aa27.53■■■□□ 2
ITGB1-215ENST00000488494 ABCC3O15438 1527 aa27.52■■■□□ 2
ITGB1-215ENST00000488494 ERBINQ96RT1 1412 aa27.52■■■□□ 2
ITGB1-215ENST00000488494 WASHC2CQ9Y4E1 1318 aa27.52■■■□□ 2
ITGB1-215ENST00000488494 RRP7BPQ9NSQ0 103 aa27.49■■□□□ 1.99
ITGB1-215ENST00000488494 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
ITGB1-215ENST00000488494 PRDM15P57071 1507 aaPredicted RBP27.48■■□□□ 1.99
ITGB1-215ENST00000488494 FAM50AQ14320 339 aaKnown RBP27.48■■□□□ 1.99
ITGB1-215ENST00000488494 NCOA1Q15788 1441 aa27.48■■□□□ 1.99
ITGB1-215ENST00000488494 CEP152O94986 1710 aa27.47■■□□□ 1.99
ITGB1-215ENST00000488494 ANKRD30AQ9BXX3 1397 aa27.47■■□□□ 1.99
ITGB1-215ENST00000488494 ADGRL2O95490 1459 aa27.45■■□□□ 1.99
ITGB1-215ENST00000488494 CHIC2Q9UKJ5 165 aa27.45■■□□□ 1.98
ITGB1-215ENST00000488494 TNRQ92752 1358 aa27.45■■□□□ 1.98
ITGB1-215ENST00000488494 DEPDC5O75140 1603 aa27.45■■□□□ 1.98
ITGB1-215ENST00000488494 FBXO31Q5XUX0 539 aaPredicted RBP27.43■■□□□ 1.98
ITGB1-215ENST00000488494 A2ML1A8K2U0 1454 aa27.43■■□□□ 1.98
ITGB1-215ENST00000488494 ILDR1Q86SU0 546 aaPredicted RBP27.42■■□□□ 1.98
ITGB1-215ENST00000488494 PPARGC1BQ86YN6 1023 aaKnown RBP27.39■■□□□ 1.98
ITGB1-215ENST00000488494 PLA2R1Q13018 1463 aa27.38■■□□□ 1.97
ITGB1-215ENST00000488494 DMRT2Q9Y5R5 561 aa27.38■■□□□ 1.97
ITGB1-215ENST00000488494 PTPRTO14522 1441 aa27.38■■□□□ 1.97
ITGB1-215ENST00000488494 SPATA31D1Q6ZQQ2 1576 aa27.37■■□□□ 1.97
ITGB1-215ENST00000488494 ERVK-7P63135 1459 aa27.36■■□□□ 1.97
ITGB1-215ENST00000488494 NLRP1Q9C000 1473 aa27.34■■□□□ 1.97
ITGB1-215ENST00000488494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.31■■□□□ 1.961e-12■□□□□ 10
ITGB1-215ENST00000488494 VWDEQ8N2E2 1590 aa27.31■■□□□ 1.96
ITGB1-215ENST00000488494 KANK1Q14678 1352 aa27.3■■□□□ 1.96
ITGB1-215ENST00000488494 NCKAP5LQ9HCH0 1330 aa27.29■■□□□ 1.96
ITGB1-215ENST00000488494 ANKRD50Q9ULJ7 1429 aa27.28■■□□□ 1.96
ITGB1-215ENST00000488494 POLR1AO95602 1720 aaPredicted RBP27.27■■□□□ 1.96
ITGB1-215ENST00000488494 UGGT1Q9NYU2 1555 aa27.27■■□□□ 1.96
ITGB1-215ENST00000488494 LMTK2Q8IWU2 1503 aa27.27■■□□□ 1.96
ITGB1-215ENST00000488494 ARHGAP31Q2M1Z3 1444 aa27.27■■□□□ 1.96
ITGB1-215ENST00000488494 FBXO41Q8TF61 875 aa27.25■■□□□ 1.95
ITGB1-215ENST00000488494 PKD2Q13563 968 aa27.24■■□□□ 1.95
ITGB1-215ENST00000488494 EFCAB6Q5THR3 1501 aa27.24■■□□□ 1.95
ITGB1-215ENST00000488494 ROCK1Q13464 1354 aa27.23■■□□□ 1.95
ITGB1-215ENST00000488494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.23■■□□□ 1.95
ITGB1-215ENST00000488494 CERKQ8TCT0 537 aa27.23■■□□□ 1.95
ITGB1-215ENST00000488494 NEURL4Q96JN8 1562 aa27.22■■□□□ 1.95
ITGB1-215ENST00000488494 UNC13BO14795 1591 aa27.21■■□□□ 1.95
ITGB1-215ENST00000488494 ITGAEP38570 1179 aa27.19■■□□□ 1.94
ITGB1-215ENST00000488494 CFAP65Q6ZU64 1925 aaKnown RBP27.19■■□□□ 1.94
ITGB1-215ENST00000488494 LTBP4Q8N2S1 1624 aa27.19■■□□□ 1.94
ITGB1-215ENST00000488494 UBR1Q8IWV7 1749 aa27.18■■□□□ 1.94
ITGB1-215ENST00000488494 RRBP1Q9P2E9 1410 aaKnown RBP27.17■■□□□ 1.94
ITGB1-215ENST00000488494 THEMISQ8N1K5 641 aaPredicted RBP27.15■■□□□ 1.94
ITGB1-215ENST00000488494 TET3O43151 1660 aa27.14■■□□□ 1.93
ITGB1-215ENST00000488494 SYNMO15061 1565 aa27.14■■□□□ 1.93
ITGB1-215ENST00000488494 PIK3C2BO00750 1634 aa27.12■■□□□ 1.93
ITGB1-215ENST00000488494 ZNF335Q9H4Z2 1342 aaPredicted RBP27.12■■□□□ 1.93
ITGB1-215ENST00000488494 GCC2Q8IWJ2 1684 aa27.1■■□□□ 1.93
ITGB1-215ENST00000488494 ANKLE2Q86XL3 938 aa27.09■■□□□ 1.93
ITGB1-215ENST00000488494 NOS1P29475 1434 aa27.08■■□□□ 1.93
ITGB1-215ENST00000488494 RPRD2Q5VT52 1461 aaKnown RBP27.08■■□□□ 1.93
ITGB1-215ENST00000488494 IQGAP3Q86VI3 1631 aa27.08■■□□□ 1.93
ITGB1-215ENST00000488494 IQGAP1P46940 1657 aa27.08■■□□□ 1.92
ITGB1-215ENST00000488494 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
ITGB1-215ENST00000488494 MED14O60244 1454 aa27.07■■□□□ 1.92
ITGB1-215ENST00000488494 SLIT1O75093 1534 aa27.05■■□□□ 1.92
ITGB1-215ENST00000488494 IQSEC2Q5JU85 1478 aa27.04■■□□□ 1.92
ITGB1-215ENST00000488494 KDM5AP29375 1690 aaKnown RBP27.04■■□□□ 1.92
ITGB1-215ENST00000488494 ADGRB3O60242 1522 aa27.03■■□□□ 1.92
ITGB1-215ENST00000488494 SCAF11Q99590 1463 aaKnown RBP27.03■■□□□ 1.92
ITGB1-215ENST00000488494 ARHGAP23Q9P227 1491 aa27.03■■□□□ 1.92
ITGB1-215ENST00000488494 E9PCH4 1651 aa27.01■■□□□ 1.92
ITGB1-215ENST00000488494 IDI1Q13907 227 aa26.97■■□□□ 1.91
ITGB1-215ENST00000488494 NUP155O75694 1391 aa26.97■■□□□ 1.91
ITGB1-215ENST00000488494 STAG3Q9UJ98 1225 aa26.96■■□□□ 1.91
ITGB1-215ENST00000488494 TMEM2Q9UHN6 1383 aa26.96■■□□□ 1.91
ITGB1-215ENST00000488494 CPS1P31327 1500 aa26.95■■□□□ 1.91
ITGB1-215ENST00000488494 NAIPQ13075 1403 aa26.94■■□□□ 1.9
ITGB1-215ENST00000488494 LTKP29376 864 aa26.92■■□□□ 1.9
ITGB1-215ENST00000488494 TXNDC2Q86VQ3 553 aa26.91■■□□□ 1.9
ITGB1-215ENST00000488494 SLC52A1Q9NWF4 448 aa26.91■■□□□ 1.9
ITGB1-215ENST00000488494 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
ITGB1-215ENST00000488494 EID1Q9Y6B2 187 aa26.89■■□□□ 1.9
ITGB1-215ENST00000488494 TMEM131LA2VDJ0 1609 aa26.88■■□□□ 1.89
ITGB1-215ENST00000488494 MYO5BQ9ULV0 1848 aa26.88■■□□□ 1.89
ITGB1-215ENST00000488494 STRCP1A6NGW2 1772 aa26.86■■□□□ 1.89
ITGB1-215ENST00000488494 SPHKAPQ2M3C7 1700 aa26.84■■□□□ 1.89
ITGB1-215ENST00000488494 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
ITGB1-215ENST00000488494 UBAP1LF5GYI3 381 aa26.79■■□□□ 1.88
ITGB1-215ENST00000488494 RIMS2Q9UQ26 1411 aa26.78■■□□□ 1.88
ITGB1-215ENST00000488494 LRRC7Q96NW7 1537 aa26.76■■□□□ 1.87
ITGB1-215ENST00000488494 CHGAP10645 457 aaKnown RBP26.76■■□□□ 1.87
ITGB1-215ENST00000488494 TRPM2O94759 1503 aa26.74■■□□□ 1.87
ITGB1-215ENST00000488494 CLTCL1P53675 1640 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms