RNA–Protein interactions for RNA: ENST00000488085.1

PSMD2-216, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 4

Gene PSMD2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-216	ENST00000488085	DUOX2	Q9NRD8	1548 aa		13.72	□□□□□ -0.21
PSMD2-216	ENST00000488085	ZNF142	P52746	1687 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD2-216	ENST00000488085	MROH1	Q8NDA8	1641 aa		13.72	□□□□□ -0.21
PSMD2-216	ENST00000488085	KDM5D	Q9BY66	1539 aa		13.71	□□□□□ -0.21
PSMD2-216	ENST00000488085	GGT6	Q6P531	493 aa		13.71	□□□□□ -0.21
PSMD2-216	ENST00000488085	UHRF1BP1	Q6BDS2	1440 aa		13.71	□□□□□ -0.22
PSMD2-216	ENST00000488085	KIF3B	O15066	747 aa		13.7	□□□□□ -0.22
PSMD2-216	ENST00000488085	CFAP65	Q6ZU64	1925 aa	Known RBP	13.7	□□□□□ -0.22
PSMD2-216	ENST00000488085	CEP152	O94986	1710 aa		13.7	□□□□□ -0.22
PSMD2-216	ENST00000488085	DEPDC5	O75140	1603 aa		13.69	□□□□□ -0.22
PSMD2-216	ENST00000488085	MYO3A	Q8NEV4	1616 aa		13.69	□□□□□ -0.22
PSMD2-216	ENST00000488085	HSPA2	P54652	639 aa		13.69	□□□□□ -0.22
PSMD2-216	ENST00000488085	PTPRK	Q15262	1439 aa		13.69	□□□□□ -0.22
PSMD2-216	ENST00000488085	ADGRL2	O95490	1459 aa		13.67	□□□□□ -0.22
PSMD2-216	ENST00000488085	ERBIN	Q96RT1	1412 aa		13.66	□□□□□ -0.22
PSMD2-216	ENST00000488085	ABCC3	O15438	1527 aa		13.66	□□□□□ -0.22
PSMD2-216	ENST00000488085	PRDM15	P57071	1507 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMD2-216	ENST00000488085	KIF15	Q9NS87	1388 aa		13.66	□□□□□ -0.22
PSMD2-216	ENST00000488085	PZP	P20742	1482 aa		13.66	□□□□□ -0.22
PSMD2-216	ENST00000488085	CAMSAP1	Q5T5Y3	1602 aa		13.65	□□□□□ -0.22
PSMD2-216	ENST00000488085	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMD2-216	ENST00000488085	NCOA1	Q15788	1441 aa		13.64	□□□□□ -0.23
PSMD2-216	ENST00000488085	WASHC2C	Q9Y4E1	1318 aa		13.63	□□□□□ -0.23
PSMD2-216	ENST00000488085	ANKRD30A	Q9BXX3	1397 aa		13.62	□□□□□ -0.23
PSMD2-216	ENST00000488085	VWDE	Q8N2E2	1590 aa		13.62	□□□□□ -0.23
PSMD2-216	ENST00000488085	RRP7BP	Q9NSQ0	103 aa		13.61	□□□□□ -0.23
PSMD2-216	ENST00000488085	SPATA31D1	Q6ZQQ2	1576 aa		13.61	□□□□□ -0.23
PSMD2-216	ENST00000488085	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PSMD2-216	ENST00000488085	A2ML1	A8K2U0	1454 aa		13.6	□□□□□ -0.23
PSMD2-216	ENST00000488085	POLR1A	O95602	1720 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD2-216	ENST00000488085	FAM50A	Q14320	339 aa	Known RBP	13.59	□□□□□ -0.23
PSMD2-216	ENST00000488085	CHIC2	Q9UKJ5	165 aa		13.59	□□□□□ -0.23
PSMD2-216	ENST00000488085	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD2-216	ENST00000488085	PLA2R1	Q13018	1463 aa		13.58	□□□□□ -0.24
PSMD2-216	ENST00000488085	LMTK2	Q8IWU2	1503 aa		13.58	□□□□□ -0.24
PSMD2-216	ENST00000488085	TNR	Q92752	1358 aa		13.58	□□□□□ -0.24
PSMD2-216	ENST00000488085	ARHGAP31	Q2M1Z3	1444 aa		13.57	□□□□□ -0.24
PSMD2-216	ENST00000488085	PTPRT	O14522	1441 aa		13.56	□□□□□ -0.24
PSMD2-216	ENST00000488085	ERVK-7	P63135	1459 aa		13.56	□□□□□ -0.24
PSMD2-216	ENST00000488085	ROCK1	Q13464	1354 aa		13.56	□□□□□ -0.24
PSMD2-216	ENST00000488085	RRBP1	Q9P2E9	1410 aa	Known RBP	13.56	□□□□□ -0.24
PSMD2-216	ENST00000488085	NLRP1	Q9C000	1473 aa		13.55	□□□□□ -0.24
PSMD2-216	ENST00000488085	UNC13B	O14795	1591 aa		13.55	□□□□□ -0.24
PSMD2-216	ENST00000488085	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.55	□□□□□ -0.24
PSMD2-216	ENST00000488085	DMRT2	Q9Y5R5	561 aa		13.55	□□□□□ -0.24
PSMD2-216	ENST00000488085	UBR1	Q8IWV7	1749 aa		13.55	□□□□□ -0.24
PSMD2-216	ENST00000488085	ANKRD50	Q9ULJ7	1429 aa		13.55	□□□□□ -0.24
PSMD2-216	ENST00000488085	GCC2	Q8IWJ2	1684 aa		13.54	□□□□□ -0.24
PSMD2-216	ENST00000488085	EFCAB6	Q5THR3	1501 aa		13.53	□□□□□ -0.24
PSMD2-216	ENST00000488085	TET3	O43151	1660 aa		13.53	□□□□□ -0.24
PSMD2-216	ENST00000488085	KDM5A	P29375	1690 aa	Known RBP	13.53	□□□□□ -0.24
PSMD2-216	ENST00000488085	UGGT1	Q9NYU2	1555 aa		13.52	□□□□□ -0.25
PSMD2-216	ENST00000488085	NEURL4	Q96JN8	1562 aa		13.51	□□□□□ -0.25
PSMD2-216	ENST00000488085	KANK1	Q14678	1352 aa		13.51	□□□□□ -0.25
PSMD2-216	ENST00000488085	IQGAP3	Q86VI3	1631 aa		13.5	□□□□□ -0.25
PSMD2-216	ENST00000488085	PKD2	Q13563	968 aa		13.5	□□□□□ -0.25
PSMD2-216	ENST00000488085	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.49	□□□□□ -0.25	2e-7	■□□□□ 9.9
PSMD2-216	ENST00000488085	PIK3C2B	O00750	1634 aa		13.49	□□□□□ -0.25
PSMD2-216	ENST00000488085	LTBP4	Q8N2S1	1624 aa		13.49	□□□□□ -0.25
PSMD2-216	ENST00000488085	SYNM	O15061	1565 aa		13.49	□□□□□ -0.25
PSMD2-216	ENST00000488085	NCKAP5L	Q9HCH0	1330 aa		13.48	□□□□□ -0.25
PSMD2-216	ENST00000488085		E9PCH4	1651 aa		13.48	□□□□□ -0.25
PSMD2-216	ENST00000488085	MYO5B	Q9ULV0	1848 aa		13.48	□□□□□ -0.25
PSMD2-216	ENST00000488085	RPRD2	Q5VT52	1461 aa	Known RBP	13.48	□□□□□ -0.25
PSMD2-216	ENST00000488085	NOS1	P29475	1434 aa		13.47	□□□□□ -0.25
PSMD2-216	ENST00000488085	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMD2-216	ENST00000488085	MED14	O60244	1454 aa		13.46	□□□□□ -0.25
PSMD2-216	ENST00000488085	IQGAP1	P46940	1657 aa		13.45	□□□□□ -0.26
PSMD2-216	ENST00000488085	SLIT1	O75093	1534 aa		13.44	□□□□□ -0.26
PSMD2-216	ENST00000488085	ARHGAP23	Q9P227	1491 aa		13.44	□□□□□ -0.26
PSMD2-216	ENST00000488085	CERK	Q8TCT0	537 aa		13.44	□□□□□ -0.26
PSMD2-216	ENST00000488085	FBXO41	Q8TF61	875 aa		13.44	□□□□□ -0.26
PSMD2-216	ENST00000488085	ITGAE	P38570	1179 aa		13.43	□□□□□ -0.26
PSMD2-216	ENST00000488085	IQSEC2	Q5JU85	1478 aa		13.42	□□□□□ -0.26
PSMD2-216	ENST00000488085	NAIP	Q13075	1403 aa		13.41	□□□□□ -0.26
PSMD2-216	ENST00000488085	ANKLE2	Q86XL3	938 aa		13.41	□□□□□ -0.26
PSMD2-216	ENST00000488085	STRCP1	A6NGW2	1772 aa		13.4	□□□□□ -0.26
PSMD2-216	ENST00000488085	ADGRB3	O60242	1522 aa		13.4	□□□□□ -0.26
PSMD2-216	ENST00000488085	SPHKAP	Q2M3C7	1700 aa		13.4	□□□□□ -0.26
PSMD2-216	ENST00000488085	IDI1	Q13907	227 aa		13.39	□□□□□ -0.27
PSMD2-216	ENST00000488085	TMEM131L	A2VDJ0	1609 aa		13.39	□□□□□ -0.27
PSMD2-216	ENST00000488085	HFM1	A2PYH4	1435 aa		13.39	□□□□□ -0.27
PSMD2-216	ENST00000488085	NPHP4	O75161	1426 aa	Predicted RBP	13.39	□□□□□ -0.27
PSMD2-216	ENST00000488085	SCAF11	Q99590	1463 aa	Known RBP	13.38	□□□□□ -0.27
PSMD2-216	ENST00000488085	SLC52A1	Q9NWF4	448 aa		13.38	□□□□□ -0.27
PSMD2-216	ENST00000488085	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.38	□□□□□ -0.27
PSMD2-216	ENST00000488085	NUP155	O75694	1391 aa		13.37	□□□□□ -0.27
PSMD2-216	ENST00000488085	TMEM2	Q9UHN6	1383 aa		13.36	□□□□□ -0.27
PSMD2-216	ENST00000488085	LTK	P29376	864 aa		13.35	□□□□□ -0.27
PSMD2-216	ENST00000488085	CPS1	P31327	1500 aa		13.34	□□□□□ -0.27
PSMD2-216	ENST00000488085	XIRP1	Q702N8	1843 aa	Known RBP	13.34	□□□□□ -0.27
PSMD2-216	ENST00000488085	KIF1B	O60333	1816 aa		13.32	□□□□□ -0.28
PSMD2-216	ENST00000488085	TXNDC2	Q86VQ3	553 aa		13.32	□□□□□ -0.28
PSMD2-216	ENST00000488085	ZFYVE9	O95405	1425 aa		13.31	□□□□□ -0.28
PSMD2-216	ENST00000488085	STAG3	Q9UJ98	1225 aa		13.3	□□□□□ -0.28
PSMD2-216	ENST00000488085	EID1	Q9Y6B2	187 aa		13.3	□□□□□ -0.28
PSMD2-216	ENST00000488085	CLTCL1	P53675	1640 aa		13.3	□□□□□ -0.28
PSMD2-216	ENST00000488085	CHD2	O14647	1828 aa	Known RBP	13.29	□□□□□ -0.28
PSMD2-216	ENST00000488085	TRPM2	O94759	1503 aa		13.29	□□□□□ -0.28
PSMD2-216	ENST00000488085	NWD1	Q149M9	1564 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms