RNA–Protein interactions for RNA: ENST00000488085.1

PSMD2-216, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 4

Gene PSMD2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-216ENST00000488085 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
PSMD2-216ENST00000488085 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.72
PSMD2-216ENST00000488085 ABCC9O60706 1549 aa19.08■□□□□ 0.64
PSMD2-216ENST00000488085 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
PSMD2-216ENST00000488085 NACADO15069 1562 aa18.33■□□□□ 0.52
PSMD2-216ENST00000488085 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
PSMD2-216ENST00000488085 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.5
PSMD2-216ENST00000488085 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
PSMD2-216ENST00000488085 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
PSMD2-216ENST00000488085 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.48
PSMD2-216ENST00000488085 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
PSMD2-216ENST00000488085 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
PSMD2-216ENST00000488085 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
PSMD2-216ENST00000488085 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
PSMD2-216ENST00000488085 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
PSMD2-216ENST00000488085 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
PSMD2-216ENST00000488085 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
PSMD2-216ENST00000488085 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
PSMD2-216ENST00000488085 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
PSMD2-216ENST00000488085 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
PSMD2-216ENST00000488085 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
PSMD2-216ENST00000488085 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
PSMD2-216ENST00000488085 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
PSMD2-216ENST00000488085 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
PSMD2-216ENST00000488085 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
PSMD2-216ENST00000488085 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
PSMD2-216ENST00000488085 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
PSMD2-216ENST00000488085 WIZO95785 1651 aa16.64■□□□□ 0.25
PSMD2-216ENST00000488085 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
PSMD2-216ENST00000488085 NESP48681 1621 aa16.5■□□□□ 0.23
PSMD2-216ENST00000488085 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
PSMD2-216ENST00000488085 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
PSMD2-216ENST00000488085 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
PSMD2-216ENST00000488085 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
PSMD2-216ENST00000488085 CUX2O14529 1486 aa16.36■□□□□ 0.21
PSMD2-216ENST00000488085 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
PSMD2-216ENST00000488085 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
PSMD2-216ENST00000488085 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
PSMD2-216ENST00000488085 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
PSMD2-216ENST00000488085 CFTRP13569 1480 aa16.26■□□□□ 0.19
PSMD2-216ENST00000488085 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.19
PSMD2-216ENST00000488085 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
PSMD2-216ENST00000488085 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
PSMD2-216ENST00000488085 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
PSMD2-216ENST00000488085 WDR62O43379 1518 aa16.16■□□□□ 0.18
PSMD2-216ENST00000488085 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
PSMD2-216ENST00000488085 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
PSMD2-216ENST00000488085 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
PSMD2-216ENST00000488085 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
PSMD2-216ENST00000488085 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
PSMD2-216ENST00000488085 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
PSMD2-216ENST00000488085 IFT140Q96RY7 1462 aa15.83■□□□□ 0.12
PSMD2-216ENST00000488085 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
PSMD2-216ENST00000488085 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
PSMD2-216ENST00000488085 CUX1P39880 1505 aa15.77■□□□□ 0.11
PSMD2-216ENST00000488085 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.11
PSMD2-216ENST00000488085 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
PSMD2-216ENST00000488085 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.1
PSMD2-216ENST00000488085 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
PSMD2-216ENST00000488085 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
PSMD2-216ENST00000488085 SOGA1O94964 1423 aa15.67■□□□□ 0.1
PSMD2-216ENST00000488085 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
PSMD2-216ENST00000488085 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.14e-7■■■□□ 17.9
PSMD2-216ENST00000488085 CHD1O14646 1710 aa15.63■□□□□ 0.09
PSMD2-216ENST00000488085 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
PSMD2-216ENST00000488085 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
PSMD2-216ENST00000488085 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
PSMD2-216ENST00000488085 PBRM1Q86U86 1689 aa15.58■□□□□ 0.08
PSMD2-216ENST00000488085 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
PSMD2-216ENST00000488085 WRNQ14191 1432 aaPredicted RBP eCLIP15.57■□□□□ 0.08
PSMD2-216ENST00000488085 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
PSMD2-216ENST00000488085 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
PSMD2-216ENST00000488085 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
PSMD2-216ENST00000488085 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.07
PSMD2-216ENST00000488085 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
PSMD2-216ENST00000488085 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
PSMD2-216ENST00000488085 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.06
PSMD2-216ENST00000488085 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.06
PSMD2-216ENST00000488085 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.06
PSMD2-216ENST00000488085 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
PSMD2-216ENST00000488085 CLASP1Q7Z460 1538 aa15.42■□□□□ 0.06
PSMD2-216ENST00000488085 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
PSMD2-216ENST00000488085 ADAMTS12P58397 1594 aa15.4■□□□□ 0.06
PSMD2-216ENST00000488085 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
PSMD2-216ENST00000488085 FBLN2P98095 1184 aa15.39■□□□□ 0.05
PSMD2-216ENST00000488085 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
PSMD2-216ENST00000488085 GRIN2AQ12879 1464 aa15.33■□□□□ 0.05
PSMD2-216ENST00000488085 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
PSMD2-216ENST00000488085 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
PSMD2-216ENST00000488085 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
PSMD2-216ENST00000488085 NUP160Q12769 1436 aa15.28■□□□□ 0.04
PSMD2-216ENST00000488085 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
PSMD2-216ENST00000488085 CUL7Q14999 1698 aa15.26■□□□□ 0.03
PSMD2-216ENST00000488085 KIF27Q86VH2 1401 aa15.25■□□□□ 0.03
PSMD2-216ENST00000488085 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
PSMD2-216ENST00000488085 IGF1RP08069 1367 aa15.21■□□□□ 0.02
PSMD2-216ENST00000488085 CYB5RLQ6IPT4 315 aa15.19■□□□□ 0.02
PSMD2-216ENST00000488085 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
PSMD2-216ENST00000488085 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
PSMD2-216ENST00000488085 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms