RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 CEP170BQ9Y4F5 1589 aaPredicted RBP31.86■■■□□ 2.69
TRIM8-204ENST00000487927 KDM5DQ9BY66 1539 aa31.86■■■□□ 2.69
TRIM8-204ENST00000487927 FAM135AQ9P2D6 1515 aa31.86■■■□□ 2.69
TRIM8-204ENST00000487927 RNF17Q9BXT8 1623 aaKnown RBP31.8■■■□□ 2.68
TRIM8-204ENST00000487927 PZPP20742 1482 aa31.78■■■□□ 2.68
TRIM8-204ENST00000487927 APLP2Q06481 763 aa31.78■■■□□ 2.68
TRIM8-204ENST00000487927 PTPN23Q9H3S7 1636 aa31.78■■■□□ 2.68
TRIM8-204ENST00000487927 EIF2AK4Q9P2K8 1649 aaKnown RBP31.77■■■□□ 2.68
TRIM8-204ENST00000487927 PLA2R1Q13018 1463 aa31.77■■■□□ 2.68
TRIM8-204ENST00000487927 CROCC2H7BZ55 1655 aa31.76■■■□□ 2.68
TRIM8-204ENST00000487927 WASHC2CQ9Y4E1 1318 aa31.75■■■□□ 2.67
TRIM8-204ENST00000487927 FBXO31Q5XUX0 539 aaPredicted RBP31.75■■■□□ 2.67
TRIM8-204ENST00000487927 A2ML1A8K2U0 1454 aa31.75■■■□□ 2.67
TRIM8-204ENST00000487927 DNMT1P26358 1616 aaKnown RBP31.75■■■□□ 2.67
TRIM8-204ENST00000487927 NCKAP5LQ9HCH0 1330 aa31.75■■■□□ 2.67
TRIM8-204ENST00000487927 LTBP4Q8N2S1 1624 aa31.74■■■□□ 2.67
TRIM8-204ENST00000487927 TCOF1Q13428 1488 aaKnown RBP31.73■■■□□ 2.67
TRIM8-204ENST00000487927 MROH1Q8NDA8 1641 aa31.72■■■□□ 2.67
TRIM8-204ENST00000487927 TNRQ92752 1358 aa31.71■■■□□ 2.67
TRIM8-204ENST00000487927 ABCC5O15440 1437 aa31.7■■■□□ 2.67
TRIM8-204ENST00000487927 SHANK2Q9UPX8 1470 aa31.7■■■□□ 2.66
TRIM8-204ENST00000487927 ZC3H13Q5T200 1668 aaKnown RBP31.7■■■□□ 2.66
TRIM8-204ENST00000487927 ABCC3O15438 1527 aa31.7■■■□□ 2.66
TRIM8-204ENST00000487927 DUOX2Q9NRD8 1548 aa31.7■■■□□ 2.66
TRIM8-204ENST00000487927 FGD6Q6ZV73 1430 aa31.69■■■□□ 2.66
TRIM8-204ENST00000487927 PKD2Q13563 968 aa31.66■■■□□ 2.66
TRIM8-204ENST00000487927 CEP152O94986 1710 aa31.64■■■□□ 2.66
TRIM8-204ENST00000487927 DAPK1P53355 1430 aa31.64■■■□□ 2.66
TRIM8-204ENST00000487927 KIF15Q9NS87 1388 aa31.62■■■□□ 2.65
TRIM8-204ENST00000487927 POLR1AO95602 1720 aaPredicted RBP31.61■■■□□ 2.65
TRIM8-204ENST00000487927 SPATA31D1Q6ZQQ2 1576 aa31.59■■■□□ 2.65
TRIM8-204ENST00000487927 NLRP1Q9C000 1473 aa31.59■■■□□ 2.65
TRIM8-204ENST00000487927 ERBINQ96RT1 1412 aa31.58■■■□□ 2.65
TRIM8-204ENST00000487927 NEURL4Q96JN8 1562 aa31.57■■■□□ 2.64
TRIM8-204ENST00000487927 ZNF335Q9H4Z2 1342 aaPredicted RBP31.56■■■□□ 2.64
TRIM8-204ENST00000487927 PRDM15P57071 1507 aaPredicted RBP31.56■■■□□ 2.64
TRIM8-204ENST00000487927 RRP7BPQ9NSQ0 103 aa31.56■■■□□ 2.64
TRIM8-204ENST00000487927 CFAP65Q6ZU64 1925 aaKnown RBP31.55■■■□□ 2.64
TRIM8-204ENST00000487927 IQSEC2Q5JU85 1478 aa31.55■■■□□ 2.64
TRIM8-204ENST00000487927 ERVK-7P63135 1459 aa31.54■■■□□ 2.64
TRIM8-204ENST00000487927 DEPDC5O75140 1603 aa31.53■■■□□ 2.64
TRIM8-204ENST00000487927 UGGT1Q9NYU2 1555 aa31.53■■■□□ 2.64
TRIM8-204ENST00000487927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.5■■■□□ 2.63
TRIM8-204ENST00000487927 CHIC2Q9UKJ5 165 aa31.48■■■□□ 2.63
TRIM8-204ENST00000487927 ANKRD30AQ9BXX3 1397 aa31.46■■■□□ 2.63
TRIM8-204ENST00000487927 THEMISQ8N1K5 641 aaPredicted RBP31.46■■■□□ 2.63
TRIM8-204ENST00000487927 ARHGAP31Q2M1Z3 1444 aa31.44■■■□□ 2.62
TRIM8-204ENST00000487927 ADGRL2O95490 1459 aa31.43■■■□□ 2.62
TRIM8-204ENST00000487927 UBR1Q8IWV7 1749 aa31.41■■■□□ 2.62
TRIM8-204ENST00000487927 ANKLE2Q86XL3 938 aa31.41■■■□□ 2.62
TRIM8-204ENST00000487927 MED14O60244 1454 aa31.4■■■□□ 2.62
TRIM8-204ENST00000487927 VWDEQ8N2E2 1590 aa31.4■■■□□ 2.62
TRIM8-204ENST00000487927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.39■■■□□ 2.62
TRIM8-204ENST00000487927 FAM50AQ14320 339 aaKnown RBP31.38■■■□□ 2.61
TRIM8-204ENST00000487927 LMTK2Q8IWU2 1503 aa31.37■■■□□ 2.61
TRIM8-204ENST00000487927 NPHP4O75161 1426 aaPredicted RBP31.36■■■□□ 2.61
TRIM8-204ENST00000487927 IQGAP1P46940 1657 aa31.35■■■□□ 2.61
TRIM8-204ENST00000487927 KANK1Q14678 1352 aa31.34■■■□□ 2.61
TRIM8-204ENST00000487927 CPS1P31327 1500 aa31.3■■■□□ 2.6
TRIM8-204ENST00000487927 PIK3C2BO00750 1634 aa31.29■■■□□ 2.6
TRIM8-204ENST00000487927 EFCAB6Q5THR3 1501 aa31.27■■■□□ 2.6
TRIM8-204ENST00000487927 ARHGAP23Q9P227 1491 aa31.27■■■□□ 2.6
TRIM8-204ENST00000487927 ANKRD50Q9ULJ7 1429 aa31.26■■■□□ 2.6
TRIM8-204ENST00000487927 SLIT1O75093 1534 aa31.26■■■□□ 2.59
TRIM8-204ENST00000487927 UBAP1LF5GYI3 381 aa31.25■■■□□ 2.59
TRIM8-204ENST00000487927 SYNMO15061 1565 aa31.24■■■□□ 2.59
TRIM8-204ENST00000487927 STRCP1A6NGW2 1772 aa31.24■■■□□ 2.59
TRIM8-204ENST00000487927 SCAF11Q99590 1463 aaKnown RBP31.22■■■□□ 2.59
TRIM8-204ENST00000487927 KDM5AP29375 1690 aaKnown RBP31.21■■■□□ 2.59
TRIM8-204ENST00000487927 NOS1P29475 1434 aa31.19■■■□□ 2.58
TRIM8-204ENST00000487927 LTKP29376 864 aa31.19■■■□□ 2.58
TRIM8-204ENST00000487927 IDI1Q13907 227 aa31.16■■■□□ 2.58
TRIM8-204ENST00000487927 UNC13BO14795 1591 aa31.16■■■□□ 2.58
TRIM8-204ENST00000487927 TET3O43151 1660 aa31.15■■■□□ 2.58
TRIM8-204ENST00000487927 TXNDC2Q86VQ3 553 aa31.14■■■□□ 2.58
TRIM8-204ENST00000487927 TMEM2Q9UHN6 1383 aa31.14■■■□□ 2.58
TRIM8-204ENST00000487927 PPARGC1BQ86YN6 1023 aaKnown RBP31.13■■■□□ 2.57
TRIM8-204ENST00000487927 ROCK1Q13464 1354 aa31.13■■■□□ 2.57
TRIM8-204ENST00000487927 RPRD2Q5VT52 1461 aaKnown RBP31.11■■■□□ 2.57
TRIM8-204ENST00000487927 GCC2Q8IWJ2 1684 aa31.11■■■□□ 2.57
TRIM8-204ENST00000487927 ADGRB3O60242 1522 aa31.09■■■□□ 2.57
TRIM8-204ENST00000487927 LRRC7Q96NW7 1537 aa31.09■■■□□ 2.57
TRIM8-204ENST00000487927 ALKQ9UM73 1620 aa31.09■■■□□ 2.57
TRIM8-204ENST00000487927 STAG3Q9UJ98 1225 aa31.08■■■□□ 2.57
TRIM8-204ENST00000487927 EID1Q9Y6B2 187 aa31.07■■■□□ 2.56
TRIM8-204ENST00000487927 DISP3Q9P2K9 1392 aa31.05■■■□□ 2.56
TRIM8-204ENST00000487927 MYO5BQ9ULV0 1848 aa31.04■■■□□ 2.56
TRIM8-204ENST00000487927 TOM1O60784 492 aa31.04■■■□□ 2.56
TRIM8-204ENST00000487927 E9PCH4 1651 aa31.03■■■□□ 2.56
TRIM8-204ENST00000487927 IQGAP3Q86VI3 1631 aa31.03■■■□□ 2.56
TRIM8-204ENST00000487927 SLC52A1Q9NWF4 448 aa31.03■■■□□ 2.56
TRIM8-204ENST00000487927 ITGAEP38570 1179 aa31.01■■■□□ 2.55
TRIM8-204ENST00000487927 PIP4K2BP78356 416 aa31.01■■■□□ 2.55
TRIM8-204ENST00000487927 XIRP1Q702N8 1843 aaKnown RBP31.01■■■□□ 2.55
TRIM8-204ENST00000487927 SCAF1Q9H7N4 1312 aaKnown RBP30.98■■■□□ 2.55
TRIM8-204ENST00000487927 TMEM131LA2VDJ0 1609 aa30.96■■■□□ 2.55
TRIM8-204ENST00000487927 HSPA1LP34931 641 aa30.94■■■□□ 2.54
TRIM8-204ENST00000487927 ZFYVE9O95405 1425 aa30.92■■■□□ 2.54
TRIM8-204ENST00000487927 RRBP1Q9P2E9 1410 aaKnown RBP30.91■■■□□ 2.54
TRIM8-204ENST00000487927 NUP155O75694 1391 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms