RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 KIF15Q9NS87 1388 aa26.34■■□□□ 1.81
HMG20B-212ENST00000487894 KIF3BO15066 747 aa26.34■■□□□ 1.81
HMG20B-212ENST00000487894 ADGRL2O95490 1459 aa26.34■■□□□ 1.81
HMG20B-212ENST00000487894 FAM50AQ14320 339 aaKnown RBP26.32■■□□□ 1.8
HMG20B-212ENST00000487894 PPP6R1Q9UPN7 881 aa26.31■■□□□ 1.8
HMG20B-212ENST00000487894 DEPDC5O75140 1603 aa26.31■■□□□ 1.8
HMG20B-212ENST00000487894 ZMYM3Q14202 1370 aa26.31■■□□□ 1.8
HMG20B-212ENST00000487894 CEP152O94986 1710 aa26.31■■□□□ 1.8
HMG20B-212ENST00000487894 ERBINQ96RT1 1412 aa26.31■■□□□ 1.8
HMG20B-212ENST00000487894 ANKRD30AQ9BXX3 1397 aa26.28■■□□□ 1.8
HMG20B-212ENST00000487894 PRDM15P57071 1507 aaPredicted RBP26.28■■□□□ 1.8
HMG20B-212ENST00000487894 ILDR1Q86SU0 546 aaPredicted RBP26.27■■□□□ 1.8
HMG20B-212ENST00000487894 NPATQ14207 1427 aa26.27■■□□□ 1.8
HMG20B-212ENST00000487894 NCOA1Q15788 1441 aa26.27■■□□□ 1.8
HMG20B-212ENST00000487894 MYO3AQ8NEV4 1616 aa26.27■■□□□ 1.8
HMG20B-212ENST00000487894 CHIC2Q9UKJ5 165 aa26.26■■□□□ 1.79
HMG20B-212ENST00000487894 ABCC3O15438 1527 aa26.25■■□□□ 1.79
HMG20B-212ENST00000487894 UHRF1BP1Q6BDS2 1440 aa26.25■■□□□ 1.79
HMG20B-212ENST00000487894 RRP7BPQ9NSQ0 103 aa26.25■■□□□ 1.79
HMG20B-212ENST00000487894 ZNF142P52746 1687 aaPredicted RBP26.25■■□□□ 1.79
HMG20B-212ENST00000487894 PTPRKQ15262 1439 aa26.24■■□□□ 1.79
HMG20B-212ENST00000487894 CAMSAP1Q5T5Y3 1602 aa26.23■■□□□ 1.79
HMG20B-212ENST00000487894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.22■■□□□ 1.793e-7■■■□□ 14.6
HMG20B-212ENST00000487894 PZPP20742 1482 aa26.21■■□□□ 1.79
HMG20B-212ENST00000487894 RRBP1Q9P2E9 1410 aaKnown RBP26.21■■□□□ 1.79
HMG20B-212ENST00000487894 HSPA2P54652 639 aa26.19■■□□□ 1.78
HMG20B-212ENST00000487894 WASHC2CQ9Y4E1 1318 aa26.18■■□□□ 1.78
HMG20B-212ENST00000487894 STRCQ7RTU9 1775 aa26.16■■□□□ 1.78
HMG20B-212ENST00000487894 VWDEQ8N2E2 1590 aa26.16■■□□□ 1.78
HMG20B-212ENST00000487894 CEP170BQ9Y4F5 1589 aaPredicted RBP26.15■■□□□ 1.78
HMG20B-212ENST00000487894 CFAP65Q6ZU64 1925 aaKnown RBP26.14■■□□□ 1.77
HMG20B-212ENST00000487894 ROCK1Q13464 1354 aa26.13■■□□□ 1.77
HMG20B-212ENST00000487894 ANKRD50Q9ULJ7 1429 aa26.12■■□□□ 1.77
HMG20B-212ENST00000487894 UNC13BO14795 1591 aa26.11■■□□□ 1.77
HMG20B-212ENST00000487894 SPATA31D1Q6ZQQ2 1576 aa26.11■■□□□ 1.77
HMG20B-212ENST00000487894 LMTK2Q8IWU2 1503 aa26.09■■□□□ 1.77
HMG20B-212ENST00000487894 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
HMG20B-212ENST00000487894 TNRQ92752 1358 aa26.07■■□□□ 1.76
HMG20B-212ENST00000487894 ERVK-7P63135 1459 aa26.06■■□□□ 1.76
HMG20B-212ENST00000487894 GCC2Q8IWJ2 1684 aa26.06■■□□□ 1.76
HMG20B-212ENST00000487894 A2ML1A8K2U0 1454 aa26.05■■□□□ 1.76
HMG20B-212ENST00000487894 ITGAEP38570 1179 aa26.05■■□□□ 1.76
HMG20B-212ENST00000487894 KANK1Q14678 1352 aa26.04■■□□□ 1.76
HMG20B-212ENST00000487894 ARHGAP31Q2M1Z3 1444 aa26.04■■□□□ 1.76
HMG20B-212ENST00000487894 EFCAB6Q5THR3 1501 aa26.04■■□□□ 1.76
HMG20B-212ENST00000487894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.761e-6■□□□□ 9.8
HMG20B-212ENST00000487894 TET3O43151 1660 aa26.02■■□□□ 1.76
HMG20B-212ENST00000487894 NLRP1Q9C000 1473 aa26■■□□□ 1.75
HMG20B-212ENST00000487894 IQGAP3Q86VI3 1631 aa25.99■■□□□ 1.75
HMG20B-212ENST00000487894 POLR1AO95602 1720 aaPredicted RBP25.98■■□□□ 1.75
HMG20B-212ENST00000487894 PLA2R1Q13018 1463 aa25.98■■□□□ 1.75
HMG20B-212ENST00000487894 UBR1Q8IWV7 1749 aa25.95■■□□□ 1.74
HMG20B-212ENST00000487894 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
HMG20B-212ENST00000487894 UGGT1Q9NYU2 1555 aa25.94■■□□□ 1.74
HMG20B-212ENST00000487894 SYNMO15061 1565 aa25.93■■□□□ 1.74
HMG20B-212ENST00000487894 E9PCH4 1651 aa25.93■■□□□ 1.74
HMG20B-212ENST00000487894 NAIPQ13075 1403 aa25.9■■□□□ 1.74
HMG20B-212ENST00000487894 PIK3C2BO00750 1634 aa25.9■■□□□ 1.74
HMG20B-212ENST00000487894 PTPRTO14522 1441 aa25.89■■□□□ 1.74
HMG20B-212ENST00000487894 RPRD2Q5VT52 1461 aaKnown RBP25.89■■□□□ 1.73
HMG20B-212ENST00000487894 KDM5AP29375 1690 aaKnown RBP25.87■■□□□ 1.73
HMG20B-212ENST00000487894 NEURL4Q96JN8 1562 aa25.87■■□□□ 1.73
HMG20B-212ENST00000487894 HFM1A2PYH4 1435 aa25.86■■□□□ 1.73
HMG20B-212ENST00000487894 NOS1P29475 1434 aa25.86■■□□□ 1.73
HMG20B-212ENST00000487894 DMRT2Q9Y5R5 561 aa25.84■■□□□ 1.73
HMG20B-212ENST00000487894 NCKAP5LQ9HCH0 1330 aa25.83■■□□□ 1.73
HMG20B-212ENST00000487894 NUP155O75694 1391 aa25.81■■□□□ 1.72
HMG20B-212ENST00000487894 MYO5BQ9ULV0 1848 aa25.8■■□□□ 1.72
HMG20B-212ENST00000487894 PKD2Q13563 968 aa25.8■■□□□ 1.72
HMG20B-212ENST00000487894 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
HMG20B-212ENST00000487894 THEMISQ8N1K5 641 aaPredicted RBP25.78■■□□□ 1.72
HMG20B-212ENST00000487894 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
HMG20B-212ENST00000487894 SLIT1O75093 1534 aa25.76■■□□□ 1.71
HMG20B-212ENST00000487894 IQGAP1P46940 1657 aa25.76■■□□□ 1.71
HMG20B-212ENST00000487894 ARHGAP23Q9P227 1491 aa25.75■■□□□ 1.71
HMG20B-212ENST00000487894 MED14O60244 1454 aa25.73■■□□□ 1.71
HMG20B-212ENST00000487894 FBXO41Q8TF61 875 aa25.73■■□□□ 1.71
HMG20B-212ENST00000487894 LTBP4Q8N2S1 1624 aa25.73■■□□□ 1.71
HMG20B-212ENST00000487894 TMEM131LA2VDJ0 1609 aa25.7■■□□□ 1.71
HMG20B-212ENST00000487894 IDI1Q13907 227 aa25.7■■□□□ 1.7
HMG20B-212ENST00000487894 ANKLE2Q86XL3 938 aa25.69■■□□□ 1.7
HMG20B-212ENST00000487894 SCAF11Q99590 1463 aaKnown RBP25.68■■□□□ 1.7
HMG20B-212ENST00000487894 NPHP4O75161 1426 aaPredicted RBP25.67■■□□□ 1.7
HMG20B-212ENST00000487894 SLC52A1Q9NWF4 448 aa25.66■■□□□ 1.7
HMG20B-212ENST00000487894 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
HMG20B-212ENST00000487894 STAG3Q9UJ98 1225 aa25.62■■□□□ 1.69
HMG20B-212ENST00000487894 CLTCL1P53675 1640 aa25.62■■□□□ 1.69
HMG20B-212ENST00000487894 TRPM2O94759 1503 aa25.62■■□□□ 1.69
HMG20B-212ENST00000487894 CERKQ8TCT0 537 aa25.61■■□□□ 1.69
HMG20B-212ENST00000487894 ZNF335Q9H4Z2 1342 aaPredicted RBP25.61■■□□□ 1.69
HMG20B-212ENST00000487894 STRCP1A6NGW2 1772 aa25.59■■□□□ 1.69
HMG20B-212ENST00000487894 LTKP29376 864 aa25.59■■□□□ 1.69
HMG20B-212ENST00000487894 TRIM52Q96A61 297 aa25.58■■□□□ 1.69
HMG20B-212ENST00000487894 KIF1BO60333 1816 aa25.58■■□□□ 1.68
HMG20B-212ENST00000487894 ZFYVE9O95405 1425 aa25.56■■□□□ 1.68
HMG20B-212ENST00000487894 SETD5Q9C0A6 1442 aa25.56■■□□□ 1.68
HMG20B-212ENST00000487894 TXNDC2Q86VQ3 553 aa25.55■■□□□ 1.68
HMG20B-212ENST00000487894 IQSEC2Q5JU85 1478 aa25.54■■□□□ 1.68
HMG20B-212ENST00000487894 EID1Q9Y6B2 187 aa25.53■■□□□ 1.68
HMG20B-212ENST00000487894 RIMS2Q9UQ26 1411 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms