RNA–Protein interactions for RNA: ENST00000487720.1

SKAP2-205, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 5

Gene SKAP2, Length 536 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-205ENST00000487720 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
SKAP2-205ENST00000487720 CLTCQ00610 1675 aaKnown RBP16.45■□□□□ 0.22
SKAP2-205ENST00000487720 STRCQ7RTU9 1775 aa16.45■□□□□ 0.22
SKAP2-205ENST00000487720 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
SKAP2-205ENST00000487720 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
SKAP2-205ENST00000487720 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
SKAP2-205ENST00000487720 PTPRTO14522 1441 aa16.39■□□□□ 0.21
SKAP2-205ENST00000487720 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
SKAP2-205ENST00000487720 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
SKAP2-205ENST00000487720 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
SKAP2-205ENST00000487720 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
SKAP2-205ENST00000487720 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
SKAP2-205ENST00000487720 FBXO31Q5XUX0 539 aaPredicted RBP16.36■□□□□ 0.21
SKAP2-205ENST00000487720 ABCC5O15440 1437 aa16.36■□□□□ 0.21
SKAP2-205ENST00000487720 KDM5DQ9BY66 1539 aa16.35■□□□□ 0.21
SKAP2-205ENST00000487720 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
SKAP2-205ENST00000487720 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
SKAP2-205ENST00000487720 PZPP20742 1482 aa16.34■□□□□ 0.21
SKAP2-205ENST00000487720 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
SKAP2-205ENST00000487720 NCKAP5LQ9HCH0 1330 aa16.33■□□□□ 0.2
SKAP2-205ENST00000487720 TCOF1Q13428 1488 aaKnown RBP16.33■□□□□ 0.2
SKAP2-205ENST00000487720 MYO3AQ8NEV4 1616 aa16.33■□□□□ 0.2
SKAP2-205ENST00000487720 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
SKAP2-205ENST00000487720 RNF17Q9BXT8 1623 aaKnown RBP16.32■□□□□ 0.2
SKAP2-205ENST00000487720 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
SKAP2-205ENST00000487720 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
SKAP2-205ENST00000487720 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
SKAP2-205ENST00000487720 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
SKAP2-205ENST00000487720 TNRQ92752 1358 aa16.31■□□□□ 0.2
SKAP2-205ENST00000487720 PKD2Q13563 968 aa16.31■□□□□ 0.2
SKAP2-205ENST00000487720 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
SKAP2-205ENST00000487720 DAPK1P53355 1430 aa16.3■□□□□ 0.2
SKAP2-205ENST00000487720 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
SKAP2-205ENST00000487720 EIF2AK4Q9P2K8 1649 aaKnown RBP16.3■□□□□ 0.2
SKAP2-205ENST00000487720 KIF15Q9NS87 1388 aa16.29■□□□□ 0.2
SKAP2-205ENST00000487720 ABCC3O15438 1527 aa16.29■□□□□ 0.2
SKAP2-205ENST00000487720 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.2
SKAP2-205ENST00000487720 MROH1Q8NDA8 1641 aa16.27■□□□□ 0.2
SKAP2-205ENST00000487720 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.19
SKAP2-205ENST00000487720 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
SKAP2-205ENST00000487720 LTBP4Q8N2S1 1624 aa16.26■□□□□ 0.19
SKAP2-205ENST00000487720 NLRP1Q9C000 1473 aa16.25■□□□□ 0.19
SKAP2-205ENST00000487720 THEMISQ8N1K5 641 aaPredicted RBP16.24■□□□□ 0.19
SKAP2-205ENST00000487720 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
SKAP2-205ENST00000487720 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
SKAP2-205ENST00000487720 ZC3H13Q5T200 1668 aaKnown RBP16.24■□□□□ 0.19
SKAP2-205ENST00000487720 SPATA31D1Q6ZQQ2 1576 aa16.21■□□□□ 0.19
SKAP2-205ENST00000487720 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
SKAP2-205ENST00000487720 ERVK-7P63135 1459 aa16.21■□□□□ 0.19
SKAP2-205ENST00000487720 ZNF335Q9H4Z2 1342 aaPredicted RBP16.2■□□□□ 0.18
SKAP2-205ENST00000487720 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
SKAP2-205ENST00000487720 PRDM15P57071 1507 aaPredicted RBP16.2■□□□□ 0.18
SKAP2-205ENST00000487720 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
SKAP2-205ENST00000487720 ANKLE2Q86XL3 938 aa16.2■□□□□ 0.18
SKAP2-205ENST00000487720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
SKAP2-205ENST00000487720 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
SKAP2-205ENST00000487720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
SKAP2-205ENST00000487720 UGGT1Q9NYU2 1555 aa16.18■□□□□ 0.18
SKAP2-205ENST00000487720 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
SKAP2-205ENST00000487720 CEP152O94986 1710 aa16.18■□□□□ 0.18
SKAP2-205ENST00000487720 DEPDC5O75140 1603 aa16.18■□□□□ 0.18
SKAP2-205ENST00000487720 NEURL4Q96JN8 1562 aa16.16■□□□□ 0.18
SKAP2-205ENST00000487720 KANK1Q14678 1352 aa16.15■□□□□ 0.18
SKAP2-205ENST00000487720 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
SKAP2-205ENST00000487720 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
SKAP2-205ENST00000487720 MED14O60244 1454 aa16.15■□□□□ 0.18
SKAP2-205ENST00000487720 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
SKAP2-205ENST00000487720 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.17
SKAP2-205ENST00000487720 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
SKAP2-205ENST00000487720 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
SKAP2-205ENST00000487720 NPHP4O75161 1426 aaPredicted RBP16.11■□□□□ 0.17
SKAP2-205ENST00000487720 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
SKAP2-205ENST00000487720 UBR1Q8IWV7 1749 aa16.09■□□□□ 0.17
SKAP2-205ENST00000487720 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
SKAP2-205ENST00000487720 LTKP29376 864 aa16.08■□□□□ 0.16
SKAP2-205ENST00000487720 IDI1Q13907 227 aa16.08■□□□□ 0.16
SKAP2-205ENST00000487720 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.16
SKAP2-205ENST00000487720 NOS1P29475 1434 aa16.07■□□□□ 0.16
SKAP2-205ENST00000487720 SLIT1O75093 1534 aa16.06■□□□□ 0.16
SKAP2-205ENST00000487720 TXNDC2Q86VQ3 553 aa16.06■□□□□ 0.16
SKAP2-205ENST00000487720 CPS1P31327 1500 aa16.05■□□□□ 0.16
SKAP2-205ENST00000487720 EFCAB6Q5THR3 1501 aa16.05■□□□□ 0.16
SKAP2-205ENST00000487720 UBAP1LF5GYI3 381 aa16.05■□□□□ 0.16
SKAP2-205ENST00000487720 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
SKAP2-205ENST00000487720 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
SKAP2-205ENST00000487720 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
SKAP2-205ENST00000487720 SLC52A1Q9NWF4 448 aa16.04■□□□□ 0.16
SKAP2-205ENST00000487720 EID1Q9Y6B2 187 aa16.03■□□□□ 0.16
SKAP2-205ENST00000487720 PIK3C2BO00750 1634 aa16.03■□□□□ 0.16
SKAP2-205ENST00000487720 SYNMO15061 1565 aa16.03■□□□□ 0.16
SKAP2-205ENST00000487720 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
SKAP2-205ENST00000487720 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
SKAP2-205ENST00000487720 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.15
SKAP2-205ENST00000487720 ITGAEP38570 1179 aa16.01■□□□□ 0.15
SKAP2-205ENST00000487720 UNC13BO14795 1591 aa16■□□□□ 0.15
SKAP2-205ENST00000487720 TET3O43151 1660 aa15.99■□□□□ 0.15
SKAP2-205ENST00000487720 TOM1O60784 492 aa15.98■□□□□ 0.15
SKAP2-205ENST00000487720 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
SKAP2-205ENST00000487720 RRBP1Q9P2E9 1410 aaKnown RBP15.97■□□□□ 0.15
SKAP2-205ENST00000487720 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms