RNA–Protein interactions for RNA: ENST00000487720.1

SKAP2-205, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 5

Gene SKAP2, Length 536 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-205ENST00000487720 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
SKAP2-205ENST00000487720 AEBP2Q6ZN18 517 aaPredicted RBP25.31■■□□□ 1.64
SKAP2-205ENST00000487720 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
SKAP2-205ENST00000487720 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
SKAP2-205ENST00000487720 ABCC9O60706 1549 aa23.02■■□□□ 1.28
SKAP2-205ENST00000487720 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
SKAP2-205ENST00000487720 NACADO15069 1562 aa21.91■■□□□ 1.1
SKAP2-205ENST00000487720 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
SKAP2-205ENST00000487720 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
SKAP2-205ENST00000487720 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
SKAP2-205ENST00000487720 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
SKAP2-205ENST00000487720 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
SKAP2-205ENST00000487720 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
SKAP2-205ENST00000487720 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
SKAP2-205ENST00000487720 UNC13AQ9UPW8 1703 aa21.46■■□□□ 1.03
SKAP2-205ENST00000487720 BICRAQ9NZM4 1560 aa21.37■■□□□ 1.01
SKAP2-205ENST00000487720 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
SKAP2-205ENST00000487720 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
SKAP2-205ENST00000487720 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
SKAP2-205ENST00000487720 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
SKAP2-205ENST00000487720 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
SKAP2-205ENST00000487720 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
SKAP2-205ENST00000487720 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
SKAP2-205ENST00000487720 FOXD1Q16676 465 aa20.33■□□□□ 0.85
SKAP2-205ENST00000487720 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
SKAP2-205ENST00000487720 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
SKAP2-205ENST00000487720 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
SKAP2-205ENST00000487720 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
SKAP2-205ENST00000487720 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
SKAP2-205ENST00000487720 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
SKAP2-205ENST00000487720 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
SKAP2-205ENST00000487720 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
SKAP2-205ENST00000487720 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
SKAP2-205ENST00000487720 NESP48681 1621 aa19.84■□□□□ 0.77
SKAP2-205ENST00000487720 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
SKAP2-205ENST00000487720 CUX2O14529 1486 aa19.78■□□□□ 0.76
SKAP2-205ENST00000487720 WIZO95785 1651 aa19.75■□□□□ 0.75
SKAP2-205ENST00000487720 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
SKAP2-205ENST00000487720 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
SKAP2-205ENST00000487720 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
SKAP2-205ENST00000487720 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
SKAP2-205ENST00000487720 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
SKAP2-205ENST00000487720 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
SKAP2-205ENST00000487720 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
SKAP2-205ENST00000487720 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
SKAP2-205ENST00000487720 CFTRP13569 1480 aa19.46■□□□□ 0.71
SKAP2-205ENST00000487720 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
SKAP2-205ENST00000487720 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
SKAP2-205ENST00000487720 WDR62O43379 1518 aa19.37■□□□□ 0.69
SKAP2-205ENST00000487720 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
SKAP2-205ENST00000487720 MSH5O43196 834 aa19.36■□□□□ 0.69
SKAP2-205ENST00000487720 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
SKAP2-205ENST00000487720 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
SKAP2-205ENST00000487720 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
SKAP2-205ENST00000487720 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
SKAP2-205ENST00000487720 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
SKAP2-205ENST00000487720 IFT140Q96RY7 1462 aa19■□□□□ 0.63
SKAP2-205ENST00000487720 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
SKAP2-205ENST00000487720 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
SKAP2-205ENST00000487720 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
SKAP2-205ENST00000487720 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
SKAP2-205ENST00000487720 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
SKAP2-205ENST00000487720 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
SKAP2-205ENST00000487720 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
SKAP2-205ENST00000487720 PIAS4Q8N2W9 510 aaPredicted RBP18.81■□□□□ 0.6
SKAP2-205ENST00000487720 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
SKAP2-205ENST00000487720 SOGA1O94964 1423 aa18.8■□□□□ 0.6
SKAP2-205ENST00000487720 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
SKAP2-205ENST00000487720 CUX1P39880 1505 aa18.79■□□□□ 0.6
SKAP2-205ENST00000487720 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
SKAP2-205ENST00000487720 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
SKAP2-205ENST00000487720 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
SKAP2-205ENST00000487720 WDR97A6NE52 1622 aa18.66■□□□□ 0.58
SKAP2-205ENST00000487720 FBLN2P98095 1184 aa18.63■□□□□ 0.57
SKAP2-205ENST00000487720 CHD1O14646 1710 aa18.63■□□□□ 0.57
SKAP2-205ENST00000487720 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
SKAP2-205ENST00000487720 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
SKAP2-205ENST00000487720 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
SKAP2-205ENST00000487720 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
SKAP2-205ENST00000487720 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
SKAP2-205ENST00000487720 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
SKAP2-205ENST00000487720 ABCA10Q8WWZ4 1543 aa18.58■□□□□ 0.56
SKAP2-205ENST00000487720 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
SKAP2-205ENST00000487720 GAPVD1Q14C86 1478 aa18.56■□□□□ 0.56
SKAP2-205ENST00000487720 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
SKAP2-205ENST00000487720 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
SKAP2-205ENST00000487720 TOP2BQ02880 1626 aa18.52■□□□□ 0.55
SKAP2-205ENST00000487720 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
SKAP2-205ENST00000487720 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
SKAP2-205ENST00000487720 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
SKAP2-205ENST00000487720 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
SKAP2-205ENST00000487720 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
SKAP2-205ENST00000487720 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
SKAP2-205ENST00000487720 CLASP1Q7Z460 1538 aa18.47■□□□□ 0.55
SKAP2-205ENST00000487720 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
SKAP2-205ENST00000487720 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
SKAP2-205ENST00000487720 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
SKAP2-205ENST00000487720 FHAD1B1AJZ9 1412 aa18.34■□□□□ 0.53
SKAP2-205ENST00000487720 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
SKAP2-205ENST00000487720 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.53
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