RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FAM135AQ9P2D6 1515 aa17.74■□□□□ 0.43
SPEN-205ENST00000487496 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
SPEN-205ENST00000487496 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
SPEN-205ENST00000487496 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
SPEN-205ENST00000487496 FBXO31Q5XUX0 539 aaPredicted RBP17.73■□□□□ 0.43
SPEN-205ENST00000487496 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
SPEN-205ENST00000487496 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
SPEN-205ENST00000487496 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
SPEN-205ENST00000487496 CROCC2H7BZ55 1655 aa17.71■□□□□ 0.43
SPEN-205ENST00000487496 CHIC2Q9UKJ5 165 aa17.71■□□□□ 0.43
SPEN-205ENST00000487496 RNF17Q9BXT8 1623 aaKnown RBP17.71■□□□□ 0.43
SPEN-205ENST00000487496 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
SPEN-205ENST00000487496 EIF2AK4Q9P2K8 1649 aaKnown RBP17.7■□□□□ 0.42
SPEN-205ENST00000487496 PZPP20742 1482 aa17.69■□□□□ 0.42
SPEN-205ENST00000487496 ANKRD30AQ9BXX3 1397 aa17.68■□□□□ 0.42
SPEN-205ENST00000487496 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
SPEN-205ENST00000487496 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
SPEN-205ENST00000487496 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
SPEN-205ENST00000487496 ABCC3O15438 1527 aa17.67■□□□□ 0.42
SPEN-205ENST00000487496 TNRQ92752 1358 aa17.67■□□□□ 0.42
SPEN-205ENST00000487496 PPARGC1BQ86YN6 1023 aaKnown RBP17.67■□□□□ 0.42
SPEN-205ENST00000487496 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
SPEN-205ENST00000487496 CAMSAP1Q5T5Y3 1602 aa17.66■□□□□ 0.42
SPEN-205ENST00000487496 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
SPEN-205ENST00000487496 PTPRTO14522 1441 aa17.65■□□□□ 0.42
SPEN-205ENST00000487496 ZNF142P52746 1687 aaPredicted RBP17.64■□□□□ 0.42
SPEN-205ENST00000487496 A2ML1A8K2U0 1454 aa17.64■□□□□ 0.41
SPEN-205ENST00000487496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.419e-6■□□□□ 10.7
SPEN-205ENST00000487496 ZC3H13Q5T200 1668 aaKnown RBP17.63■□□□□ 0.41
SPEN-205ENST00000487496 NCKAP5LQ9HCH0 1330 aa17.63■□□□□ 0.41
SPEN-205ENST00000487496 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
SPEN-205ENST00000487496 FBXO41Q8TF61 875 aa17.62■□□□□ 0.41
SPEN-205ENST00000487496 PLA2R1Q13018 1463 aa17.62■□□□□ 0.41
SPEN-205ENST00000487496 CERKQ8TCT0 537 aa17.61■□□□□ 0.41
SPEN-205ENST00000487496 PRDM15P57071 1507 aaPredicted RBP17.61■□□□□ 0.41
SPEN-205ENST00000487496 PKD2Q13563 968 aa17.6■□□□□ 0.41
SPEN-205ENST00000487496 NLRP1Q9C000 1473 aa17.58■□□□□ 0.41
SPEN-205ENST00000487496 KANK1Q14678 1352 aa17.58■□□□□ 0.4
SPEN-205ENST00000487496 CEP152O94986 1710 aa17.58■□□□□ 0.4
SPEN-205ENST00000487496 DEPDC5O75140 1603 aa17.58■□□□□ 0.4
SPEN-205ENST00000487496 SPATA31D1Q6ZQQ2 1576 aa17.57■□□□□ 0.4
SPEN-205ENST00000487496 ERVK-7P63135 1459 aa17.57■□□□□ 0.4
SPEN-205ENST00000487496 THEMISQ8N1K5 641 aaPredicted RBP17.57■□□□□ 0.4
SPEN-205ENST00000487496 ARHGAP31Q2M1Z3 1444 aa17.56■□□□□ 0.4
SPEN-205ENST00000487496 ANKRD50Q9ULJ7 1429 aa17.56■□□□□ 0.4
SPEN-205ENST00000487496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
SPEN-205ENST00000487496 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
SPEN-205ENST00000487496 UGGT1Q9NYU2 1555 aa17.53■□□□□ 0.4
SPEN-205ENST00000487496 ITGAEP38570 1179 aa17.53■□□□□ 0.4
SPEN-205ENST00000487496 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
SPEN-205ENST00000487496 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.4
SPEN-205ENST00000487496 ANKLE2Q86XL3 938 aa17.51■□□□□ 0.39
SPEN-205ENST00000487496 LTBP4Q8N2S1 1624 aa17.5■□□□□ 0.39
SPEN-205ENST00000487496 CFAP65Q6ZU64 1925 aaKnown RBP17.5■□□□□ 0.39
SPEN-205ENST00000487496 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
SPEN-205ENST00000487496 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
SPEN-205ENST00000487496 NEURL4Q96JN8 1562 aa17.47■□□□□ 0.39
SPEN-205ENST00000487496 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.39
SPEN-205ENST00000487496 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
SPEN-205ENST00000487496 IDI1Q13907 227 aa17.44■□□□□ 0.38
SPEN-205ENST00000487496 NOS1P29475 1434 aa17.44■□□□□ 0.38
SPEN-205ENST00000487496 MED14O60244 1454 aa17.44■□□□□ 0.38
SPEN-205ENST00000487496 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
SPEN-205ENST00000487496 UBR1Q8IWV7 1749 aa17.43■□□□□ 0.38
SPEN-205ENST00000487496 UNC13BO14795 1591 aa17.42■□□□□ 0.38
SPEN-205ENST00000487496 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
SPEN-205ENST00000487496 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
SPEN-205ENST00000487496 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
SPEN-205ENST00000487496 ARHGAP23Q9P227 1491 aa17.4■□□□□ 0.38
SPEN-205ENST00000487496 LTKP29376 864 aa17.4■□□□□ 0.38
SPEN-205ENST00000487496 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
SPEN-205ENST00000487496 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
SPEN-205ENST00000487496 SYNMO15061 1565 aa17.4■□□□□ 0.38
SPEN-205ENST00000487496 NUP155O75694 1391 aa17.4■□□□□ 0.38
SPEN-205ENST00000487496 PIK3C2BO00750 1634 aa17.39■□□□□ 0.38
SPEN-205ENST00000487496 TET3O43151 1660 aa17.39■□□□□ 0.37
SPEN-205ENST00000487496 SLIT1O75093 1534 aa17.38■□□□□ 0.37
SPEN-205ENST00000487496 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
SPEN-205ENST00000487496 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
SPEN-205ENST00000487496 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
SPEN-205ENST00000487496 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
SPEN-205ENST00000487496 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
SPEN-205ENST00000487496 KDM5AP29375 1690 aaKnown RBP17.34■□□□□ 0.37
SPEN-205ENST00000487496 GCC2Q8IWJ2 1684 aa17.34■□□□□ 0.37
SPEN-205ENST00000487496 CPS1P31327 1500 aa17.33■□□□□ 0.37
SPEN-205ENST00000487496 NAIPQ13075 1403 aa17.33■□□□□ 0.36
SPEN-205ENST00000487496 ADGRB3O60242 1522 aa17.32■□□□□ 0.36
SPEN-205ENST00000487496 E9PCH4 1651 aa17.32■□□□□ 0.36
SPEN-205ENST00000487496 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
SPEN-205ENST00000487496 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
SPEN-205ENST00000487496 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
SPEN-205ENST00000487496 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
SPEN-205ENST00000487496 ZFYVE9O95405 1425 aa17.25■□□□□ 0.35
SPEN-205ENST00000487496 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
SPEN-205ENST00000487496 HDGFP51858 240 aaKnown RBP17.24■□□□□ 0.35
SPEN-205ENST00000487496 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
SPEN-205ENST00000487496 STRCP1A6NGW2 1772 aa17.24■□□□□ 0.35
SPEN-205ENST00000487496 LRRC7Q96NW7 1537 aa17.23■□□□□ 0.35
SPEN-205ENST00000487496 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
SPEN-205ENST00000487496 TOM1O60784 492 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms