RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 CLTCQ00610 1675 aaKnown RBP10.08□□□□□ -0.8
CAPN2-209ENST00000487223 LMTK2Q8IWU2 1503 aa10.08□□□□□ -0.8
CAPN2-209ENST00000487223 CROCC2H7BZ55 1655 aa10.08□□□□□ -0.8
CAPN2-209ENST00000487223 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
CAPN2-209ENST00000487223 ARHGAP31Q2M1Z3 1444 aa10.07□□□□□ -0.8
CAPN2-209ENST00000487223 CAMSAP1Q5T5Y3 1602 aa10.06□□□□□ -0.8
CAPN2-209ENST00000487223 MBD5Q9P267 1494 aa10.05□□□□□ -0.8
CAPN2-209ENST00000487223 SYCP2Q9BX26 1530 aa10.05□□□□□ -0.8
CAPN2-209ENST00000487223 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
CAPN2-209ENST00000487223 NEURL4Q96JN8 1562 aa10.05□□□□□ -0.8
CAPN2-209ENST00000487223 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
CAPN2-209ENST00000487223 MIA2Q96PC5 1412 aa10.05□□□□□ -0.8
CAPN2-209ENST00000487223 PRDM15P57071 1507 aaPredicted RBP10.04□□□□□ -0.8
CAPN2-209ENST00000487223 SLIT1O75093 1534 aa10.03□□□□□ -0.8
CAPN2-209ENST00000487223 VWDEQ8N2E2 1590 aa10.03□□□□□ -0.8
CAPN2-209ENST00000487223 NWD1Q149M9 1564 aa10.03□□□□□ -0.8
CAPN2-209ENST00000487223 RAPGEF3O95398 923 aa10.02□□□□□ -0.8
CAPN2-209ENST00000487223 DHX29Q7Z478 1369 aaKnown RBP10.01□□□□□ -0.81
CAPN2-209ENST00000487223 LRRC9Q6ZRR7 1453 aa10.01□□□□□ -0.81
CAPN2-209ENST00000487223 IQGAP1P46940 1657 aa10.01□□□□□ -0.81
CAPN2-209ENST00000487223 ARHGAP23Q9P227 1491 aa10.01□□□□□ -0.81
CAPN2-209ENST00000487223 ABCC3O15438 1527 aa10□□□□□ -0.81
CAPN2-209ENST00000487223 DUOX2Q9NRD8 1548 aa10□□□□□ -0.81
CAPN2-209ENST00000487223 NCOA3Q9Y6Q9 1424 aa10□□□□□ -0.81
CAPN2-209ENST00000487223 PIAS4Q8N2W9 510 aaPredicted RBP9.99□□□□□ -0.81
CAPN2-209ENST00000487223 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
CAPN2-209ENST00000487223 DIP2AQ14689 1571 aa9.99□□□□□ -0.81
CAPN2-209ENST00000487223 UGGT1Q9NYU2 1555 aa9.99□□□□□ -0.81
CAPN2-209ENST00000487223 NCBP3Q53F19 620 aaKnown RBP9.99□□□□□ -0.81
CAPN2-209ENST00000487223 MROH1Q8NDA8 1641 aa9.98□□□□□ -0.81
CAPN2-209ENST00000487223 UBR1Q8IWV7 1749 aa9.97□□□□□ -0.81
CAPN2-209ENST00000487223 ZMYM3Q14202 1370 aa9.96□□□□□ -0.82
CAPN2-209ENST00000487223 RPRD2Q5VT52 1461 aaKnown RBP9.96□□□□□ -0.82
CAPN2-209ENST00000487223 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
CAPN2-209ENST00000487223 ARID4BQ4LE39 1312 aaPredicted RBP9.95□□□□□ -0.82
CAPN2-209ENST00000487223 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
CAPN2-209ENST00000487223 ADGRL2O95490 1459 aa9.94□□□□□ -0.82
CAPN2-209ENST00000487223 NKTRP30414 1462 aaKnown RBP9.93□□□□□ -0.82
CAPN2-209ENST00000487223 SPAG9O60271 1321 aaKnown RBP9.93□□□□□ -0.82
CAPN2-209ENST00000487223 GCC2Q8IWJ2 1684 aa9.92□□□□□ -0.82
CAPN2-209ENST00000487223 ERVK-7P63135 1459 aa9.91□□□□□ -0.82
CAPN2-209ENST00000487223 MED1Q15648 1581 aaPredicted RBP9.91□□□□□ -0.82
CAPN2-209ENST00000487223 SOCS7O14512 581 aa9.91□□□□□ -0.82
CAPN2-209ENST00000487223 TNRQ92752 1358 aa9.9□□□□□ -0.82
CAPN2-209ENST00000487223 PRAG1Q86YV5 1406 aa9.9□□□□□ -0.83
CAPN2-209ENST00000487223 LAMC1P11047 1609 aa9.89□□□□□ -0.83
CAPN2-209ENST00000487223 ALKQ9UM73 1620 aa9.89□□□□□ -0.83
CAPN2-209ENST00000487223 UNC13BO14795 1591 aa9.89□□□□□ -0.83
CAPN2-209ENST00000487223 PIK3C2BO00750 1634 aa9.89□□□□□ -0.83
CAPN2-209ENST00000487223 MYOM3Q5VTT5 1437 aa9.89□□□□□ -0.83
CAPN2-209ENST00000487223 IQGAP3Q86VI3 1631 aa9.88□□□□□ -0.83
CAPN2-209ENST00000487223 ADGRB3O60242 1522 aa9.88□□□□□ -0.83
CAPN2-209ENST00000487223 NPHP4O75161 1426 aaPredicted RBP9.87□□□□□ -0.83
CAPN2-209ENST00000487223 ESF1Q9H501 851 aaKnown RBP9.87□□□□□ -0.83
CAPN2-209ENST00000487223 TET3O43151 1660 aa9.87□□□□□ -0.83
CAPN2-209ENST00000487223 EFCAB6Q5THR3 1501 aa9.86□□□□□ -0.83
CAPN2-209ENST00000487223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.86□□□□□ -0.83
CAPN2-209ENST00000487223 HNRNPUL2Q1KMD3 747 aaKnown RBP9.86□□□□□ -0.83
CAPN2-209ENST00000487223 VPS8Q8N3P4 1428 aa9.86□□□□□ -0.83
CAPN2-209ENST00000487223 CEP152O94986 1710 aa9.86□□□□□ -0.83
CAPN2-209ENST00000487223 MTUS2Q5JR59 1369 aa9.84□□□□□ -0.83
CAPN2-209ENST00000487223 XIRP1Q702N8 1843 aaKnown RBP9.84□□□□□ -0.83
CAPN2-209ENST00000487223 PIK3R4Q99570 1358 aa9.84□□□□□ -0.83
CAPN2-209ENST00000487223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN2-209ENST00000487223 FGD6Q6ZV73 1430 aa9.84□□□□□ -0.83
CAPN2-209ENST00000487223 SCAF11Q99590 1463 aaKnown RBP9.84□□□□□ -0.83
CAPN2-209ENST00000487223 FAM135BQ49AJ0 1406 aa9.83□□□□□ -0.84
CAPN2-209ENST00000487223 SHPRHQ149N8 1683 aa9.83□□□□□ -0.84
CAPN2-209ENST00000487223 P3H3Q8IVL6 736 aa9.83□□□□□ -0.84
CAPN2-209ENST00000487223 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
CAPN2-209ENST00000487223 CDK12Q9NYV4 1490 aaPredicted RBP9.82□□□□□ -0.84
CAPN2-209ENST00000487223 AHDC1Q5TGY3 1603 aaPredicted RBP9.82□□□□□ -0.84
CAPN2-209ENST00000487223 NOS1P29475 1434 aa9.82□□□□□ -0.84
CAPN2-209ENST00000487223 THEMISQ8N1K5 641 aaPredicted RBP9.81□□□□□ -0.84
CAPN2-209ENST00000487223 STRCP1A6NGW2 1772 aa9.81□□□□□ -0.84
CAPN2-209ENST00000487223 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
CAPN2-209ENST00000487223 DCCP43146 1447 aa9.81□□□□□ -0.84
CAPN2-209ENST00000487223 CFDP1Q9UEE9 299 aaPredicted RBP9.81□□□□□ -0.84
CAPN2-209ENST00000487223 ACIN1Q9UKV3 1341 aaKnown RBP9.8□□□□□ -0.84
CAPN2-209ENST00000487223 EIF5BO60841 1220 aaKnown RBP9.8□□□□□ -0.84
CAPN2-209ENST00000487223 CHD2O14647 1828 aaKnown RBP9.78□□□□□ -0.84
CAPN2-209ENST00000487223 ROCK1Q13464 1354 aa9.77□□□□□ -0.85
CAPN2-209ENST00000487223 TOM1O60784 492 aa9.77□□□□□ -0.85
CAPN2-209ENST00000487223 BCL11AQ9H165 835 aa9.77□□□□□ -0.85
CAPN2-209ENST00000487223 SETD1AO15047 1707 aaKnown RBP9.76□□□□□ -0.85
CAPN2-209ENST00000487223 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
CAPN2-209ENST00000487223 ANKLE2Q86XL3 938 aa9.76□□□□□ -0.85
CAPN2-209ENST00000487223 FOXD4L1Q9NU39 408 aa9.76□□□□□ -0.85
CAPN2-209ENST00000487223 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
CAPN2-209ENST00000487223 KANK1Q14678 1352 aa9.75□□□□□ -0.85
CAPN2-209ENST00000487223 XRN1Q8IZH2 1706 aaKnown RBP9.74□□□□□ -0.85
CAPN2-209ENST00000487223 TMEM131LA2VDJ0 1609 aa9.74□□□□□ -0.85
CAPN2-209ENST00000487223 TRPM2O94759 1503 aa9.74□□□□□ -0.85
CAPN2-209ENST00000487223 HSPA2P54652 639 aa9.73□□□□□ -0.85
CAPN2-209ENST00000487223 DAPK1P53355 1430 aa9.72□□□□□ -0.85
CAPN2-209ENST00000487223 NHSL1Q5SYE7 1610 aa9.72□□□□□ -0.85
CAPN2-209ENST00000487223 PLEKHG1Q9ULL1 1385 aa9.72□□□□□ -0.85
CAPN2-209ENST00000487223 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
CAPN2-209ENST00000487223 DISP3Q9P2K9 1392 aa9.71□□□□□ -0.85
CAPN2-209ENST00000487223 COL22A1Q8NFW1 1626 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms